RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Lonp1Q8CGK3 949 aaKnown RBP14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 Znf426Q8R1D1 550 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 Coq6Q8R1S0 476 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 Olfr449Q8VGW8 311 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 Tex19.1Q99MV2 351 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 ParvaQ9EPC1 372 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 Ropn1Q9ESG2 212 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 Kcna3P16390 528 aa14.06□□□□□ -0.16
Nup88-201ENSMUST00000035283 Elk3P41971 409 aa14.06□□□□□ -0.16
Nup88-201ENSMUST00000035283 Stmn2P55821 179 aa14.06□□□□□ -0.16
Nup88-201ENSMUST00000035283 Casp7P97864 303 aa14.06□□□□□ -0.16
Nup88-201ENSMUST00000035283 Spag6Q3V0U9 509 aa14.06□□□□□ -0.16
Nup88-201ENSMUST00000035283 Spdye4aQ5IBH6 268 aa14.06□□□□□ -0.16
Nup88-201ENSMUST00000035283 Trim24Q64127 1051 aaKnown RBP14.06□□□□□ -0.16
Nup88-201ENSMUST00000035283 Cacna2d2Q6PHS9 1154 aa14.06□□□□□ -0.16
Nup88-201ENSMUST00000035283 Bnip1Q6QD59 228 aa14.06□□□□□ -0.16
Nup88-201ENSMUST00000035283 Gigyf2Q6Y7W8 1291 aaKnown RBP14.06□□□□□ -0.16
Nup88-201ENSMUST00000035283 Gpr151Q7TSN6 422 aa14.06□□□□□ -0.16
Nup88-201ENSMUST00000035283 Nipal4Q8BZF2 406 aa14.06□□□□□ -0.16
Nup88-201ENSMUST00000035283 Acot11Q8VHQ9 594 aa14.06□□□□□ -0.16
Nup88-201ENSMUST00000035283 Cttnbp2nlQ99LJ0 638 aa14.06□□□□□ -0.16
Nup88-201ENSMUST00000035283 Q9D1Z2 194 aa14.06□□□□□ -0.16
Nup88-201ENSMUST00000035283 Anxa9Q9JHQ0 345 aa14.06□□□□□ -0.16
Nup88-201ENSMUST00000035283 Klhl41A2AUC9 606 aa14.06□□□□□ -0.16
Nup88-201ENSMUST00000035283 Magea6O89010 325 aa14.06□□□□□ -0.16
Nup88-201ENSMUST00000035283 Ythdf1P59326 559 aaKnown RBP14.06□□□□□ -0.16
Nup88-201ENSMUST00000035283 S100a5P63084 93 aa14.06□□□□□ -0.16
Nup88-201ENSMUST00000035283 Insm1Q63ZV0 521 aa14.06□□□□□ -0.16
Nup88-201ENSMUST00000035283 BoraQ8BS90 525 aa14.06□□□□□ -0.16
Nup88-201ENSMUST00000035283 Tyw3Q8BSA9 257 aa14.06□□□□□ -0.16
Nup88-201ENSMUST00000035283 Arhgap24Q8C4V1 747 aa14.06□□□□□ -0.16
Nup88-201ENSMUST00000035283 Gga1Q8R0H9 635 aa14.06□□□□□ -0.16
Nup88-201ENSMUST00000035283 Rmi1Q9D4G9 616 aa14.06□□□□□ -0.16
Nup88-201ENSMUST00000035283 Cul2Q9D4H8 745 aa14.06□□□□□ -0.16
Nup88-201ENSMUST00000035283 Tmod4Q9JLH8 345 aa14.06□□□□□ -0.16
Nup88-201ENSMUST00000035283 Actl7bQ9QY83 418 aa14.06□□□□□ -0.16
Nup88-201ENSMUST00000035283 Mical3Q8CJ19 1993 aa14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 Cntnap4Q99P47 1310 aa14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 Iqcj-Schip1A0A088MLT8 559 aa14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 PtproE9Q612 1226 aa14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 Farp1F8VPU2 1048 aa14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 Gm20509G3UZF1 325 aa14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 Gm379J3QQ19 296 aa14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 Schip1P0DPB4 484 aa14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 Usp10P52479 792 aaKnown RBP14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 Stx2Q00262 289 aa14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 Cage1Q5IR70 849 aa14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 Tcaf1Q8BNE1 924 aa14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 Tgif2lx2Q8K5B9 231 aa14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 Trim60Q8VI40 466 aa14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 Cpt1bQ924X2 772 aa14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 Zfp623Q9CY99 499 aa14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 Aldh18a1Q9Z110 795 aa14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 Gm1141B9EJU1 475 aa14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 Vmn2r103E9PWW0 856 aa14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 Raph1F2Z3U3 1266 aa14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 Dpysl4O35098 572 aa14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 KitP05532 979 aa14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 PrkceP16054 737 aa14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 Slc10a3P21129 473 aa14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 Gja8P28236 440 aa14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 Dynlt1P51807 113 aa14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 Ptgs2Q05769 604 aa14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 Pi4k2aQ2TBE6 479 aa14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 InscQ3HNM7 579 aa14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 9130409I23RikQ3TS87 320 aa14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 Sema5bQ60519 1093 aa14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 Tmcc1Q69ZZ6 649 aa14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 Gpatch2lQ6PE65 482 aa14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 Sh3tc2Q80VA5 1289 aa14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 Vmn2r43Q80Z08 845 aa14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 Pdik1lQ8QZR7 341 aa14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 Tasp1Q8R1G1 420 aa14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 Q8R1Y2 203 aa14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 Olfr809Q8VEX8 328 aa14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 Atad3Q925I1 591 aa14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 GrapQ9CX99 217 aa14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 Dclre1aQ9JIC3 1026 aa14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 Rilpl1Q9JJC6 406 aa14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 Ccr10Q9JL21 362 aa14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 Abt1Q9QYL7 269 aaKnown RBP14.05□□□□□ -0.16
Nup88-201ENSMUST00000035283 Arhgef10Q8C033 1345 aa14.04□□□□□ -0.16
Nup88-201ENSMUST00000035283 Vmn2r59E9PUT5 865 aa14.04□□□□□ -0.16
Nup88-201ENSMUST00000035283 Icam1P13597 537 aaKnown RBP14.04□□□□□ -0.16
Nup88-201ENSMUST00000035283 Serpina1eQ00898 413 aa14.04□□□□□ -0.16
Nup88-201ENSMUST00000035283 Zscan2Q07230 614 aa14.04□□□□□ -0.16
Nup88-201ENSMUST00000035283 Nlrp4aQ8BU40 982 aa14.04□□□□□ -0.16
Nup88-201ENSMUST00000035283 Epn3Q91W69 636 aa14.04□□□□□ -0.16
Nup88-201ENSMUST00000035283 Pcdhb4Q91XZ6 784 aa14.04□□□□□ -0.16
Nup88-201ENSMUST00000035283 Adi1Q99JT9 179 aa14.04□□□□□ -0.16
Nup88-201ENSMUST00000035283 Tsc1Q9EP53 1161 aa14.04□□□□□ -0.16
Nup88-201ENSMUST00000035283 Nr1h3Q9Z0Y9 445 aa14.04□□□□□ -0.16
Nup88-201ENSMUST00000035283 Arih1Q9Z1K5 555 aa14.04□□□□□ -0.16
Nup88-201ENSMUST00000035283 Plcg1Q62077 1302 aa14.04□□□□□ -0.16
Nup88-201ENSMUST00000035283 Prss51A0A286YDY8 319 aa14.04□□□□□ -0.16
Nup88-201ENSMUST00000035283 Ssxb9A2BI93 185 aa14.04□□□□□ -0.16
Nup88-201ENSMUST00000035283 Bcat1P24288 386 aa14.04□□□□□ -0.16
Nup88-201ENSMUST00000035283 YwhagP61982 247 aaKnown RBP14.04□□□□□ -0.16
Nup88-201ENSMUST00000035283 Fam198bQ3UPI1 517 aa14.04□□□□□ -0.16
Nup88-201ENSMUST00000035283 RfflQ6ZQM0 377 aa14.04□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 57 ms