Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Gm25239-201ENSMUST00000174915 86 ntBASIC35.37■■■■□ 3.25
Pcdhb4Q91XZ6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
Pcdhb4Q91XZ6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Pcdhb4Q91XZ6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.48■■■□□ 2.79
Pcdhb4Q91XZ6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
Pcdhb4Q91XZ6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Pcdhb4Q91XZ6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Pcdhb4Q91XZ6 Gm15042-201ENSMUST00000120212 883 ntBASIC31.48■■■□□ 2.63
Pcdhb4Q91XZ6 Psd-208ENSMUST00000224556 2034 ntBASIC31.29■■■□□ 2.6
Pcdhb4Q91XZ6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Pcdhb4Q91XZ6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Pcdhb4Q91XZ6 Gm15045-201ENSMUST00000117359 883 ntBASIC30.9■■■□□ 2.54
Pcdhb4Q91XZ6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
Pcdhb4Q91XZ6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Pcdhb4Q91XZ6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.53■■■□□ 2.48
Pcdhb4Q91XZ6 Gm24109-201ENSMUST00000175489 103 ntBASIC30.38■■■□□ 2.45
Pcdhb4Q91XZ6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Pcdhb4Q91XZ6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Pcdhb4Q91XZ6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Pcdhb4Q91XZ6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Pcdhb4Q91XZ6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.96■■■□□ 2.39
Pcdhb4Q91XZ6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.86■■■□□ 2.37
Pcdhb4Q91XZ6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Pcdhb4Q91XZ6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
Pcdhb4Q91XZ6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
Pcdhb4Q91XZ6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.72■■■□□ 2.35
Pcdhb4Q91XZ6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.67■■■□□ 2.34
Pcdhb4Q91XZ6 Gm23366-201ENSMUST00000175022 89 ntBASIC29.62■■■□□ 2.33
Pcdhb4Q91XZ6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Pcdhb4Q91XZ6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Pcdhb4Q91XZ6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
Pcdhb4Q91XZ6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
Pcdhb4Q91XZ6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Pcdhb4Q91XZ6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.4■■■□□ 2.3
Pcdhb4Q91XZ6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Pcdhb4Q91XZ6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
Pcdhb4Q91XZ6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Pcdhb4Q91XZ6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Pcdhb4Q91XZ6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29.14■■■□□ 2.26
Pcdhb4Q91XZ6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Pcdhb4Q91XZ6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.05■■■□□ 2.24
Pcdhb4Q91XZ6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28.97■■■□□ 2.23
Pcdhb4Q91XZ6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.95■■■□□ 2.22
Pcdhb4Q91XZ6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Pcdhb4Q91XZ6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.87■■■□□ 2.21
Pcdhb4Q91XZ6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Pcdhb4Q91XZ6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Pcdhb4Q91XZ6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.77■■■□□ 2.2
Pcdhb4Q91XZ6 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.68■■■□□ 2.18
Pcdhb4Q91XZ6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.67■■■□□ 2.18
Pcdhb4Q91XZ6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Pcdhb4Q91XZ6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Pcdhb4Q91XZ6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Pcdhb4Q91XZ6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.38■■■□□ 2.13
Pcdhb4Q91XZ6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Pcdhb4Q91XZ6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Pcdhb4Q91XZ6 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.22■■■□□ 2.11
Pcdhb4Q91XZ6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Pcdhb4Q91XZ6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Pcdhb4Q91XZ6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Pcdhb4Q91XZ6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28.06■■■□□ 2.08
Pcdhb4Q91XZ6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.06■■■□□ 2.08
Pcdhb4Q91XZ6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Pcdhb4Q91XZ6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
Pcdhb4Q91XZ6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.99■■■□□ 2.07
Pcdhb4Q91XZ6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.99■■■□□ 2.07
Pcdhb4Q91XZ6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Pcdhb4Q91XZ6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.9■■■□□ 2.06
Pcdhb4Q91XZ6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.89■■■□□ 2.06
Pcdhb4Q91XZ6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Pcdhb4Q91XZ6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.89■■■□□ 2.06
Pcdhb4Q91XZ6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Pcdhb4Q91XZ6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Pcdhb4Q91XZ6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Pcdhb4Q91XZ6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.75■■■□□ 2.03
Pcdhb4Q91XZ6 Gm25238-201ENSMUST00000174914 89 ntBASIC27.74■■■□□ 2.03
Pcdhb4Q91XZ6 Gm27325-201ENSMUST00000175467 74 ntBASIC27.72■■■□□ 2.03
Pcdhb4Q91XZ6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC27.7■■■□□ 2.02
Pcdhb4Q91XZ6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC27.66■■■□□ 2.02
Pcdhb4Q91XZ6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.65■■■□□ 2.02
Pcdhb4Q91XZ6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27.64■■■□□ 2.02
Pcdhb4Q91XZ6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27.58■■■□□ 2.01
Pcdhb4Q91XZ6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC27.58■■■□□ 2
Pcdhb4Q91XZ6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Pcdhb4Q91XZ6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC27.54■■■□□ 2
Pcdhb4Q91XZ6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Pcdhb4Q91XZ6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Pcdhb4Q91XZ6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27.47■■□□□ 1.99
Pcdhb4Q91XZ6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Pcdhb4Q91XZ6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Pcdhb4Q91XZ6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Pcdhb4Q91XZ6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Pcdhb4Q91XZ6 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Pcdhb4Q91XZ6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
Pcdhb4Q91XZ6 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Pcdhb4Q91XZ6 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Pcdhb4Q91XZ6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27.21■■□□□ 1.95
Pcdhb4Q91XZ6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Pcdhb4Q91XZ6 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Pcdhb4Q91XZ6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Retrieved 100 of 76,532 protein–RNA pairs in 907.6 ms