Protein–RNA interactions for Protein: P28236

Gja8, Gap junction alpha-8 protein, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gja8P28236 Gm25239-201ENSMUST00000174915 86 ntBASIC44.61■■■■■ 4.73
Gja8P28236 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC41.57■■■■■ 4.25
Gja8P28236 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC40.93■■■■■ 4.14
Gja8P28236 Gm24109-201ENSMUST00000175489 103 ntBASIC39■■■■□ 3.83
Gja8P28236 Gm15042-201ENSMUST00000120212 883 ntBASIC38.33■■■■□ 3.73
Gja8P28236 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC37.76■■■■□ 3.64
Gja8P28236 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC37.73■■■■□ 3.63
Gja8P28236 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC37.47■■■■□ 3.59
Gja8P28236 Gm15045-201ENSMUST00000117359 883 ntBASIC37.35■■■■□ 3.57
Gja8P28236 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC37.22■■■■□ 3.55
Gja8P28236 Gm23366-201ENSMUST00000175022 89 ntBASIC37.2■■■■□ 3.55
Gja8P28236 AC153911.1-202ENSMUST00000218534 1034 ntBASIC36.61■■■■□ 3.45
Gja8P28236 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC36.31■■■■□ 3.4
Gja8P28236 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC36.27■■■■□ 3.4
Gja8P28236 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC36.17■■■■□ 3.38
Gja8P28236 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC36.16■■■■□ 3.38
Gja8P28236 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
Gja8P28236 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
Gja8P28236 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC35.57■■■■□ 3.28
Gja8P28236 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC35.54■■■■□ 3.28
Gja8P28236 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
Gja8P28236 Gm25238-201ENSMUST00000174914 89 ntBASIC35.44■■■■□ 3.26
Gja8P28236 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC34.75■■■■□ 3.15
Gja8P28236 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
Gja8P28236 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC34.55■■■■□ 3.12
Gja8P28236 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.47■■■■□ 3.11
Gja8P28236 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
Gja8P28236 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
Gja8P28236 Gm25262-201ENSMUST00000174934 133 ntBASIC34.32■■■■□ 3.08
Gja8P28236 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC34.26■■■■□ 3.08
Gja8P28236 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
Gja8P28236 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC34.13■■■■□ 3.05
Gja8P28236 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
Gja8P28236 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC33.89■■■■□ 3.02
Gja8P28236 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.83■■■■□ 3.01
Gja8P28236 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3
Gja8P28236 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC33.8■■■■□ 3
Gja8P28236 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC33.78■■■■□ 3
Gja8P28236 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC33.76■■■□□ 2.99
Gja8P28236 Gm26115-201ENSMUST00000175605 87 ntBASIC33.75■■■□□ 2.99
Gja8P28236 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.69■■■□□ 2.98
Gja8P28236 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.6■■■□□ 2.97
Gja8P28236 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC33.6■■■□□ 2.97
Gja8P28236 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.96
Gja8P28236 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC33.49■■■□□ 2.95
Gja8P28236 Gm27325-201ENSMUST00000175467 74 ntBASIC33.47■■■□□ 2.95
Gja8P28236 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.45■■■□□ 2.95
Gja8P28236 Gm8109-201ENSMUST00000194076 746 ntBASIC33.43■■■□□ 2.94
Gja8P28236 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
Gja8P28236 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.39■■■□□ 2.94
Gja8P28236 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
Gja8P28236 Rab21-202ENSMUST00000218831 843 ntBASIC33.33■■■□□ 2.93
Gja8P28236 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC33.31■■■□□ 2.92
Gja8P28236 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
Gja8P28236 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
Gja8P28236 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
Gja8P28236 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
Gja8P28236 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC32.84■■■□□ 2.85
Gja8P28236 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC32.84■■■□□ 2.85
Gja8P28236 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC32.79■■■□□ 2.84
Gja8P28236 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC32.7■■■□□ 2.83
Gja8P28236 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Gja8P28236 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Gja8P28236 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
Gja8P28236 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32.51■■■□□ 2.79
Gja8P28236 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.49■■■□□ 2.79
Gja8P28236 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Gja8P28236 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.46■■■□□ 2.79
Gja8P28236 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32.45■■■□□ 2.78
Gja8P28236 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Gja8P28236 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.36■■■□□ 2.77
Gja8P28236 Gm17082-201ENSMUST00000166043 1091 ntBASIC32.3■■■□□ 2.76
Gja8P28236 Gm24804-201ENSMUST00000174982 85 ntBASIC32.3■■■□□ 2.76
Gja8P28236 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.76
Gja8P28236 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC32.26■■■□□ 2.75
Gja8P28236 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32.23■■■□□ 2.75
Gja8P28236 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Gja8P28236 Psd-208ENSMUST00000224556 2034 ntBASIC32.12■■■□□ 2.73
Gja8P28236 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Gja8P28236 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31.98■■■□□ 2.71
Gja8P28236 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Gja8P28236 Gm27322-201ENSMUST00000184007 104 ntBASIC31.94■■■□□ 2.7
Gja8P28236 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Gja8P28236 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC31.9■■■□□ 2.7
Gja8P28236 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
Gja8P28236 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.85■■■□□ 2.69
Gja8P28236 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC31.82■■■□□ 2.68
Gja8P28236 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC31.82■■■□□ 2.68
Gja8P28236 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.77■■■□□ 2.68
Gja8P28236 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Gja8P28236 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC31.75■■■□□ 2.67
Gja8P28236 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.75■■■□□ 2.67
Gja8P28236 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC31.74■■■□□ 2.67
Gja8P28236 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Gja8P28236 Zfp131-205ENSMUST00000223812 663 ntBASIC31.72■■■□□ 2.67
Gja8P28236 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31.71■■■□□ 2.67
Gja8P28236 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Gja8P28236 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC31.69■■■□□ 2.66
Gja8P28236 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31.68■■■□□ 2.66
Gja8P28236 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.67■■■□□ 2.66
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms