Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Gm25239-201ENSMUST00000174915 86 ntBASIC42,53■■■■■ 4,4
Sh3tc2Q80VA5 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC39,55■■■■□ 3,92
Sh3tc2Q80VA5 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC38,92■■■■□ 3,82
Sh3tc2Q80VA5 Gm24109-201ENSMUST00000175489 103 ntBASIC37,09■■■■□ 3,53
Sh3tc2Q80VA5 Gm15042-201ENSMUST00000120212 883 ntBASIC36,76■■■■□ 3,48
Sh3tc2Q80VA5 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC35,92■■■■□ 3,34
Sh3tc2Q80VA5 Gm15045-201ENSMUST00000117359 883 ntBASIC35,87■■■■□ 3,33
Sh3tc2Q80VA5 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC35,85■■■■□ 3,33
Sh3tc2Q80VA5 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35,84■■■■□ 3,33
Sh3tc2Q80VA5 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35,6■■■■□ 3,29
Sh3tc2Q80VA5 Gm23366-201ENSMUST00000175022 89 ntBASIC35,45■■■■□ 3,27
Sh3tc2Q80VA5 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC35,4■■■■□ 3,26
Sh3tc2Q80VA5 AC153911.1-202ENSMUST00000218534 1034 ntBASIC34,75■■■■□ 3,15
Sh3tc2Q80VA5 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34,55■■■■□ 3,12
Sh3tc2Q80VA5 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC34,41■■■■□ 3,1
Sh3tc2Q80VA5 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC34,41■■■■□ 3,1
Sh3tc2Q80VA5 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34,36■■■■□ 3,09
Sh3tc2Q80VA5 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC34,32■■■■□ 3,08
Sh3tc2Q80VA5 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC34,3■■■■□ 3,08
Sh3tc2Q80VA5 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC34,12■■■■□ 3,05
Sh3tc2Q80VA5 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC34,01■■■■□ 3,04
Sh3tc2Q80VA5 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC33,85■■■■□ 3,01
Sh3tc2Q80VA5 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC33,72■■■□□ 2,99
Sh3tc2Q80VA5 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC33,71■■■□□ 2,99
Sh3tc2Q80VA5 Gm25238-201ENSMUST00000174914 89 ntBASIC33,71■■■□□ 2,99
Sh3tc2Q80VA5 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33,41■■■□□ 2,94
Sh3tc2Q80VA5 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33,17■■■□□ 2,9
Sh3tc2Q80VA5 Psd-208ENSMUST00000224556 2034 ntBASIC33,12■■■□□ 2,89
Sh3tc2Q80VA5 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33,05■■■□□ 2,88
Sh3tc2Q80VA5 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33,02■■■□□ 2,88
Sh3tc2Q80VA5 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32,98■■■□□ 2,87
Sh3tc2Q80VA5 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32,97■■■□□ 2,87
Sh3tc2Q80VA5 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC32,89■■■□□ 2,86
Sh3tc2Q80VA5 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32,83■■■□□ 2,85
Sh3tc2Q80VA5 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32,76■■■□□ 2,84
Sh3tc2Q80VA5 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC32,67■■■□□ 2,82
Sh3tc2Q80VA5 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32,59■■■□□ 2,81
Sh3tc2Q80VA5 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC32,52■■■□□ 2,8
Sh3tc2Q80VA5 Gm25262-201ENSMUST00000174934 133 ntBASIC32,49■■■□□ 2,79
Sh3tc2Q80VA5 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32,49■■■□□ 2,79
Sh3tc2Q80VA5 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32,46■■■□□ 2,79
Sh3tc2Q80VA5 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32,43■■■□□ 2,78
Sh3tc2Q80VA5 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32,28■■■□□ 2,76
Sh3tc2Q80VA5 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC32,25■■■□□ 2,75
Sh3tc2Q80VA5 Gm27325-201ENSMUST00000175467 74 ntBASIC32,12■■■□□ 2,73
Sh3tc2Q80VA5 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31,99■■■□□ 2,71
Sh3tc2Q80VA5 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31,97■■■□□ 2,71
Sh3tc2Q80VA5 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31,95■■■□□ 2,71
Sh3tc2Q80VA5 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31,95■■■□□ 2,7
Sh3tc2Q80VA5 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31,89■■■□□ 2,7
Sh3tc2Q80VA5 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31,89■■■□□ 2,69
Sh3tc2Q80VA5 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31,87■■■□□ 2,69
Sh3tc2Q80VA5 Gm26115-201ENSMUST00000175605 87 ntBASIC31,86■■■□□ 2,69
Sh3tc2Q80VA5 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31,83■■■□□ 2,69
Sh3tc2Q80VA5 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31,82■■■□□ 2,69
Sh3tc2Q80VA5 Rab21-202ENSMUST00000218831 843 ntBASIC31,81■■■□□ 2,68
Sh3tc2Q80VA5 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC31,78■■■□□ 2,68
Sh3tc2Q80VA5 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31,78■■■□□ 2,68
Sh3tc2Q80VA5 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31,71■■■□□ 2,67
Sh3tc2Q80VA5 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31,7■■■□□ 2,66
Sh3tc2Q80VA5 Gm8109-201ENSMUST00000194076 746 ntBASIC31,65■■■□□ 2,66
Sh3tc2Q80VA5 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC31,64■■■□□ 2,66
Sh3tc2Q80VA5 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31,63■■■□□ 2,65
Sh3tc2Q80VA5 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31,61■■■□□ 2,65
Sh3tc2Q80VA5 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31,59■■■□□ 2,65
Sh3tc2Q80VA5 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31,58■■■□□ 2,65
Sh3tc2Q80VA5 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31,51■■■□□ 2,63
Sh3tc2Q80VA5 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31,42■■■□□ 2,62
Sh3tc2Q80VA5 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31,41■■■□□ 2,62
Sh3tc2Q80VA5 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31,39■■■□□ 2,62
Sh3tc2Q80VA5 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31,31■■■□□ 2,6
Sh3tc2Q80VA5 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31,21■■■□□ 2,59
Sh3tc2Q80VA5 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31,18■■■□□ 2,58
Sh3tc2Q80VA5 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31,18■■■□□ 2,58
Sh3tc2Q80VA5 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31,09■■■□□ 2,57
Sh3tc2Q80VA5 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31,08■■■□□ 2,57
Sh3tc2Q80VA5 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31,05■■■□□ 2,56
Sh3tc2Q80VA5 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31,02■■■□□ 2,56
Sh3tc2Q80VA5 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30,98■■■□□ 2,55
Sh3tc2Q80VA5 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30,97■■■□□ 2,55
Sh3tc2Q80VA5 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30,94■■■□□ 2,54
Sh3tc2Q80VA5 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30,93■■■□□ 2,54
Sh3tc2Q80VA5 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC30,89■■■□□ 2,54
Sh3tc2Q80VA5 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30,89■■■□□ 2,54
Sh3tc2Q80VA5 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC30,86■■■□□ 2,53
Sh3tc2Q80VA5 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30,84■■■□□ 2,53
Sh3tc2Q80VA5 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30,82■■■□□ 2,52
Sh3tc2Q80VA5 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC30,81■■■□□ 2,52
Sh3tc2Q80VA5 Gm17082-201ENSMUST00000166043 1091 ntBASIC30,77■■■□□ 2,52
Sh3tc2Q80VA5 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30,75■■■□□ 2,51
Sh3tc2Q80VA5 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30,74■■■□□ 2,51
Sh3tc2Q80VA5 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC30,73■■■□□ 2,51
Sh3tc2Q80VA5 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30,62■■■□□ 2,49
Sh3tc2Q80VA5 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30,61■■■□□ 2,49
Sh3tc2Q80VA5 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30,6■■■□□ 2,49
Sh3tc2Q80VA5 Gm24804-201ENSMUST00000174982 85 ntBASIC30,56■■■□□ 2,48
Sh3tc2Q80VA5 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC30,54■■■□□ 2,48
Sh3tc2Q80VA5 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC30,52■■■□□ 2,48
Sh3tc2Q80VA5 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC30,51■■■□□ 2,47
Sh3tc2Q80VA5 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30,49■■■□□ 2,47
Retrieved 100 of 76,532 protein–RNA pairs in 12,9 ms