Protein–RNA interactions for Protein: Q8BNE1

Tcaf1, TRPM8 channel-associated factor 1, mousemouse

Predictions only

Length 924 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcaf1Q8BNE1 Gm25239-201ENSMUST00000174915 86 ntBASIC41.13■■■■■ 4.17
Tcaf1Q8BNE1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.91■■■■□ 3.66
Tcaf1Q8BNE1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.39■■■■□ 3.58
Tcaf1Q8BNE1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.83■■■■□ 3.49
Tcaf1Q8BNE1 Gm15042-201ENSMUST00000120212 883 ntBASIC36.2■■■■□ 3.39
Tcaf1Q8BNE1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36■■■■□ 3.35
Tcaf1Q8BNE1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.6■■■■□ 3.29
Tcaf1Q8BNE1 Gm24109-201ENSMUST00000175489 103 ntBASIC35.54■■■■□ 3.28
Tcaf1Q8BNE1 Gm15045-201ENSMUST00000117359 883 ntBASIC35.48■■■■□ 3.27
Tcaf1Q8BNE1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
Tcaf1Q8BNE1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.69■■■■□ 3.14
Tcaf1Q8BNE1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
Tcaf1Q8BNE1 Gm23366-201ENSMUST00000175022 89 ntBASIC34.37■■■■□ 3.09
Tcaf1Q8BNE1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
Tcaf1Q8BNE1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
Tcaf1Q8BNE1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.14■■■■□ 3.06
Tcaf1Q8BNE1 Psd-208ENSMUST00000224556 2034 ntBASIC34.04■■■■□ 3.04
Tcaf1Q8BNE1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.8■■■■□ 3
Tcaf1Q8BNE1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
Tcaf1Q8BNE1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.77■■■■□ 3
Tcaf1Q8BNE1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■□□ 2.99
Tcaf1Q8BNE1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
Tcaf1Q8BNE1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.55■■■□□ 2.96
Tcaf1Q8BNE1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.48■■■□□ 2.95
Tcaf1Q8BNE1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
Tcaf1Q8BNE1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.36■■■□□ 2.93
Tcaf1Q8BNE1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.34■■■□□ 2.93
Tcaf1Q8BNE1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.32■■■□□ 2.92
Tcaf1Q8BNE1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.23■■■□□ 2.91
Tcaf1Q8BNE1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Tcaf1Q8BNE1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
Tcaf1Q8BNE1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.88■■■□□ 2.85
Tcaf1Q8BNE1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.83■■■□□ 2.85
Tcaf1Q8BNE1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Tcaf1Q8BNE1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.66■■■□□ 2.82
Tcaf1Q8BNE1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.59■■■□□ 2.81
Tcaf1Q8BNE1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Tcaf1Q8BNE1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Tcaf1Q8BNE1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Tcaf1Q8BNE1 Gm25238-201ENSMUST00000174914 89 ntBASIC32.39■■■□□ 2.78
Tcaf1Q8BNE1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.28■■■□□ 2.76
Tcaf1Q8BNE1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.25■■■□□ 2.75
Tcaf1Q8BNE1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.22■■■□□ 2.75
Tcaf1Q8BNE1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Tcaf1Q8BNE1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Tcaf1Q8BNE1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Tcaf1Q8BNE1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Tcaf1Q8BNE1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.98■■■□□ 2.71
Tcaf1Q8BNE1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
Tcaf1Q8BNE1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Tcaf1Q8BNE1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Tcaf1Q8BNE1 Gm27325-201ENSMUST00000175467 74 ntBASIC31.79■■■□□ 2.68
Tcaf1Q8BNE1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Tcaf1Q8BNE1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Tcaf1Q8BNE1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.77■■■□□ 2.68
Tcaf1Q8BNE1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.74■■■□□ 2.67
Tcaf1Q8BNE1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
Tcaf1Q8BNE1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Tcaf1Q8BNE1 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.59■■■□□ 2.65
Tcaf1Q8BNE1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.52■■■□□ 2.64
Tcaf1Q8BNE1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Tcaf1Q8BNE1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.44■■■□□ 2.62
Tcaf1Q8BNE1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Tcaf1Q8BNE1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Tcaf1Q8BNE1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Tcaf1Q8BNE1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.4■■■□□ 2.62
Tcaf1Q8BNE1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
Tcaf1Q8BNE1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.34■■■□□ 2.61
Tcaf1Q8BNE1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Tcaf1Q8BNE1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
Tcaf1Q8BNE1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Tcaf1Q8BNE1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
Tcaf1Q8BNE1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
Tcaf1Q8BNE1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.14■■■□□ 2.58
Tcaf1Q8BNE1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Tcaf1Q8BNE1 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.09■■■□□ 2.57
Tcaf1Q8BNE1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Tcaf1Q8BNE1 Rab21-202ENSMUST00000218831 843 ntBASIC31.01■■■□□ 2.55
Tcaf1Q8BNE1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Tcaf1Q8BNE1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.98■■■□□ 2.55
Tcaf1Q8BNE1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.97■■■□□ 2.55
Tcaf1Q8BNE1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Tcaf1Q8BNE1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.88■■■□□ 2.53
Tcaf1Q8BNE1 Gm25262-201ENSMUST00000174934 133 ntBASIC30.84■■■□□ 2.53
Tcaf1Q8BNE1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
Tcaf1Q8BNE1 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Tcaf1Q8BNE1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
Tcaf1Q8BNE1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
Tcaf1Q8BNE1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Tcaf1Q8BNE1 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Tcaf1Q8BNE1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.65■■■□□ 2.5
Tcaf1Q8BNE1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.64■■■□□ 2.5
Tcaf1Q8BNE1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
Tcaf1Q8BNE1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Tcaf1Q8BNE1 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Tcaf1Q8BNE1 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Tcaf1Q8BNE1 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Tcaf1Q8BNE1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
Tcaf1Q8BNE1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Tcaf1Q8BNE1 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Retrieved 100 of 76,532 protein–RNA pairs in 157.8 ms