RNA–Protein interactions for RNA: YPR184W

GDB1, Transcript of Glycogen debranching enzyme, yeast

Gene GDB1, Length 4,611 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GDB1	YPR184W	YJR111C	P47148	283 aa	Known RBP	4.27	□□□□□ -1.73
GDB1	YPR184W	COX18	P53239	316 aa		4.27	□□□□□ -1.73
GDB1	YPR184W	YLR050C	Q12155	161 aa	Known RBP	4.27	□□□□□ -1.73
GDB1	YPR184W	YPR108W-A	Q3E7B3	70 aa		4.27	□□□□□ -1.73
GDB1	YPR184W	RPL31A	P0C2H8	113 aa	Known RBP	4.27	□□□□□ -1.73
GDB1	YPR184W	AIM29	P36154	155 aa		4.27	□□□□□ -1.73
GDB1	YPR184W	VRP1	P37370	817 aa		4.27	□□□□□ -1.73
GDB1	YPR184W	SPG4	Q04438	115 aa		4.27	□□□□□ -1.73
GDB1	YPR184W	YGL041C-B	Q3E750	60 aa		4.27	□□□□□ -1.73
GDB1	YPR184W	YNR034W-A	Q3E841	98 aa		4.27	□□□□□ -1.73
GDB1	YPR184W	CBT1	P36038	271 aa	Predicted RBP	4.27	□□□□□ -1.73
GDB1	YPR184W	MRPL28	P36527	147 aa		4.27	□□□□□ -1.73
GDB1	YPR184W	DMA2	P53924	522 aa		4.27	□□□□□ -1.73
GDB1	YPR184W	SYM1	Q06563	197 aa		4.27	□□□□□ -1.73
GDB1	YPR184W	PAU3	P25610	124 aa		4.26	□□□□□ -1.73
GDB1	YPR184W	DYN2	Q02647	92 aa		4.26	□□□□□ -1.73
GDB1	YPR184W	PAI3	P01094	68 aa		4.26	□□□□□ -1.73
GDB1	YPR184W	CDC43	P18898	376 aa		4.26	□□□□□ -1.73
GDB1	YPR184W	LSM2	P38203	95 aa	Known RBP	4.26	□□□□□ -1.73
GDB1	YPR184W	ICS2	P38284	255 aa		4.26	□□□□□ -1.73
GDB1	YPR184W	VHS2	P40463	436 aa		4.26	□□□□□ -1.73
GDB1	YPR184W	YIL024C	P40543	189 aa		4.26	□□□□□ -1.73
GDB1	YPR184W	YJL218W	P40892	196 aa	Known RBP	4.26	□□□□□ -1.73
GDB1	YPR184W	YOR097C	Q12274	175 aa	Predicted RBP	4.26	□□□□□ -1.73
GDB1	YPR184W	YPR071W	Q12346	211 aa		4.26	□□□□□ -1.73
GDB1	YPR184W	ADH2	P00331	348 aa	Known RBP	4.26	□□□□□ -1.73
GDB1	YPR184W	CDC50	P25656	391 aa		4.26	□□□□□ -1.73
GDB1	YPR184W	PAM16	P42949	149 aa		4.26	□□□□□ -1.73
GDB1	YPR184W	HIT1	P46973	164 aa		4.26	□□□□□ -1.73
GDB1	YPR184W	SWT21	P53873	357 aa	Predicted RBP	4.26	□□□□□ -1.73
GDB1	YPR184W	YMR007W	Q03675	126 aa		4.26	□□□□□ -1.73
GDB1	YPR184W	YPR063C	Q12160	140 aa		4.26	□□□□□ -1.73
GDB1	YPR184W	FPR2	P32472	135 aa		4.26	□□□□□ -1.73
GDB1	YPR184W	PPQ1	P32945	549 aa		4.26	□□□□□ -1.73
GDB1	YPR184W	MTC6	P38849	526 aa		4.26	□□□□□ -1.73
GDB1	YPR184W	LST8	P41318	303 aa		4.26	□□□□□ -1.73
GDB1	YPR184W	YFL019C	P43576	117 aa		4.26	□□□□□ -1.73
GDB1	YPR184W	TEX1	P53851	422 aa	Known RBP	4.26	□□□□□ -1.73
GDB1	YPR184W	SGF11	Q03067	99 aa		4.26	□□□□□ -1.73
GDB1	YPR184W	HOR7	Q05827	59 aa		4.26	□□□□□ -1.73
GDB1	YPR184W	TMC1	Q08422	150 aa	Predicted RBP	4.26	□□□□□ -1.73
GDB1	YPR184W	PRR2	Q12310	699 aa		4.26	□□□□□ -1.73
GDB1	YPR184W	RPL12A	P0CX53	165 aa	Known RBP	4.25	□□□□□ -1.73
GDB1	YPR184W	RPL12B	P0CX54	165 aa		4.25	□□□□□ -1.73
GDB1	YPR184W	YHR130C	P38834	111 aa		4.25	□□□□□ -1.73
GDB1	YPR184W	UIP3	P39547	235 aa		4.25	□□□□□ -1.73
GDB1	YPR184W	IRA2	P19158	3079 aa		4.25	□□□□□ -1.73
GDB1	YPR184W	RPB7	P34087	171 aa		4.25	□□□□□ -1.73
GDB1	YPR184W	YPT53	P36019	220 aa		4.25	□□□□□ -1.73
GDB1	YPR184W	ARL3	Q02804	198 aa		4.25	□□□□□ -1.73
GDB1	YPR184W	TIM22	Q12328	207 aa		4.25	□□□□□ -1.73
GDB1	YPR184W	PIS1	P06197	220 aa	Known RBP	4.25	□□□□□ -1.73
GDB1	YPR184W	NHP6B	P11633	99 aa	Known RBP	4.25	□□□□□ -1.73
GDB1	YPR184W	YOR008C-A	Q3E7B9	74 aa		4.25	□□□□□ -1.73
GDB1	YPR184W	BEM2	P39960	2167 aa	Known RBP	4.25	□□□□□ -1.73
GDB1	YPR184W	MRPL44	P19956	98 aa		4.24	□□□□□ -1.73
GDB1	YPR184W	MSN1	P22148	382 aa		4.24	□□□□□ -1.73
GDB1	YPR184W	YPS1	P32329	569 aa		4.24	□□□□□ -1.73
GDB1	YPR184W	YKL102C	P34249	101 aa		4.24	□□□□□ -1.73
GDB1	YPR184W	UTH1	P36135	365 aa		4.24	□□□□□ -1.73
GDB1	YPR184W	MBB1	P39534	108 aa		4.24	□□□□□ -1.73
GDB1	YPR184W	YGL185C	P53100	379 aa		4.24	□□□□□ -1.73
GDB1	YPR184W	SMD1	Q02260	146 aa	Predicted RBP	4.24	□□□□□ -1.73
GDB1	YPR184W	SPS100	P13130	326 aa		4.24	□□□□□ -1.73
GDB1	YPR184W	GAR1	P28007	205 aa	Known RBP	4.24	□□□□□ -1.73
GDB1	YPR184W	GLO1	P50107	326 aa		4.24	□□□□□ -1.73
GDB1	YPR184W	MIG1	P27705	504 aa		4.24	□□□□□ -1.73
GDB1	YPR184W	RRP4	P38792	359 aa	Known RBP	4.24	□□□□□ -1.73
GDB1	YPR184W	SAL1	D6W196	494 aa		4.23	□□□□□ -1.73
GDB1	YPR184W	RPL2A	P0CX45	254 aa	Known RBP	4.23	□□□□□ -1.73
GDB1	YPR184W	RPL2B	P0CX46	254 aa	Known RBP	4.23	□□□□□ -1.73
GDB1	YPR184W	KTI11	Q3E840	82 aa		4.23	□□□□□ -1.73
GDB1	YPR184W	YPR014C	Q6B0W2	109 aa		4.23	□□□□□ -1.73
GDB1	YPR184W	ELO2	P25358	347 aa		4.23	□□□□□ -1.73
GDB1	YPR184W	MTC7	P32633	139 aa		4.23	□□□□□ -1.73
GDB1	YPR184W	RPL14A	P36105	138 aa	Known RBP	4.23	□□□□□ -1.73
GDB1	YPR184W	RPL14B	P38754	138 aa	Known RBP	4.23	□□□□□ -1.73
GDB1	YPR184W	YGR219W	P53307	113 aa		4.23	□□□□□ -1.73
GDB1	YPR184W	POL2	P21951	2222 aa	Known RBP	4.23	□□□□□ -1.73
GDB1	YPR184W	FMT1	P32785	401 aa		4.23	□□□□□ -1.73
GDB1	YPR184W	GPP2	P40106	250 aa	Known RBP	4.23	□□□□□ -1.73
GDB1	YPR184W	NCA3	P46955	337 aa		4.23	□□□□□ -1.73
GDB1	YPR184W	YDR042C	Q03205	200 aa		4.23	□□□□□ -1.73
GDB1	YPR184W	MHR1	Q06630	226 aa		4.23	□□□□□ -1.73
GDB1	YPR184W	ENV10	Q99382	181 aa		4.23	□□□□□ -1.73
GDB1	YPR184W	RPL15A	P05748	204 aa	Known RBP	4.23	□□□□□ -1.73
GDB1	YPR184W	ARO2	P28777	376 aa	Known RBP	4.23	□□□□□ -1.73
GDB1	YPR184W	RPL15B	P54780	204 aa	Predicted RBP	4.23	□□□□□ -1.73
GDB1	YPR184W	Q0032	Q9ZZX7	96 aa		4.23	□□□□□ -1.73
GDB1	YPR184W	PAU19	P0CE85	124 aa		4.22	□□□□□ -1.73
GDB1	YPR184W	PAU21	P0CE86	164 aa		4.22	□□□□□ -1.73
GDB1	YPR184W	PAU22	P0CE87	164 aa		4.22	□□□□□ -1.73
GDB1	YPR184W	ZRT1	P32804	376 aa		4.22	□□□□□ -1.73
GDB1	YPR184W	PAU16	P35994	123 aa		4.22	□□□□□ -1.73
GDB1	YPR184W	YER181C	P40097	107 aa		4.22	□□□□□ -1.73
GDB1	YPR184W	YIL152W	P40455	235 aa		4.22	□□□□□ -1.73
GDB1	YPR184W	PAU15	P40585	124 aa		4.22	□□□□□ -1.73
GDB1	YPR184W	TIM18	Q08749	192 aa		4.22	□□□□□ -1.73
GDB1	YPR184W	PAU17	Q12370	124 aa		4.22	□□□□□ -1.73
GDB1	YPR184W	YHP1	Q04116	353 aa		4.22	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms