RNA–Protein interactions for RNA: YPR172W

YPR172W, Transcript of Putative pyridoxal 5'-phosphate synthase, yeast

Gene YPR172W, Length 603 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPR172W	YPR172W	YGL193C	P53097	103 aa		0.62	□□□□□ -2.31
YPR172W	YPR172W	NMA1	Q06178	401 aa	Known RBP	0.62	□□□□□ -2.31
YPR172W	YPR172W	SMD2	Q06217	110 aa	Known RBP	0.62	□□□□□ -2.31
YPR172W	YPR172W	YOR072W	Q08486	104 aa		0.62	□□□□□ -2.31
YPR172W	YPR172W	RPS28A	Q3E7X9	67 aa	Predicted RBP	0.62	□□□□□ -2.31
YPR172W	YPR172W	SPA2	P23201	1466 aa	Known RBP	0.61	□□□□□ -2.31
YPR172W	YPR172W	HFA1	P32874	2273 aa		0.61	□□□□□ -2.31
YPR172W	YPR172W	YGL041W-A	P0C5N3	154 aa		0.61	□□□□□ -2.31
YPR172W	YPR172W	PEX34	P25584	144 aa		0.61	□□□□□ -2.31
YPR172W	YPR172W	DER1	P38307	211 aa		0.61	□□□□□ -2.31
YPR172W	YPR172W	DLS1	P40366	167 aa		0.61	□□□□□ -2.31
YPR172W	YPR172W	YNL122C	P53921	115 aa	Predicted RBP	0.61	□□□□□ -2.31
YPR172W	YPR172W	UBR1	P19812	1950 aa		0.61	□□□□□ -2.31
YPR172W	YPR172W	HAP2	P06774	265 aa		0.6	□□□□□ -2.31
YPR172W	YPR172W	HHY1	P39982	102 aa		0.6	□□□□□ -2.31
YPR172W	YPR172W	APQ12	P40532	138 aa		0.6	□□□□□ -2.31
YPR172W	YPR172W	YJL218W	P40892	196 aa	Known RBP	0.6	□□□□□ -2.31
YPR172W	YPR172W	FMN1	Q03778	218 aa		0.6	□□□□□ -2.31
YPR172W	YPR172W	YPD1	Q07688	167 aa		0.6	□□□□□ -2.31
YPR172W	YPR172W	NSL1	Q12143	216 aa		0.6	□□□□□ -2.31
YPR172W	YPR172W	RCF2	P53721	224 aa		0.59	□□□□□ -2.31
YPR172W	YPR172W	PRP8	P33334	2413 aa	Known RBP	0.58	□□□□□ -2.32
YPR172W	YPR172W	RPS22A	P0C0W1	130 aa	Known RBP	0.58	□□□□□ -2.32
YPR172W	YPR172W	PBI2	P0CT04	75 aa	Known RBP	0.58	□□□□□ -2.32
YPR172W	YPR172W	BUB2	P26448	306 aa	Predicted RBP	0.58	□□□□□ -2.32
YPR172W	YPR172W	ATG8	P38182	117 aa	RIP-Chip data	0.58	□□□□□ -2.32	not detected
YPR172W	YPR172W	IPT1	P38954	527 aa		0.58	□□□□□ -2.32
YPR172W	YPR172W	YER181C	P40097	107 aa		0.58	□□□□□ -2.32
YPR172W	YPR172W	ATP19	P81451	68 aa		0.58	□□□□□ -2.32
YPR172W	YPR172W	MGR2	Q02889	113 aa		0.58	□□□□□ -2.32
YPR172W	YPR172W	IRC19	Q07843	230 aa		0.58	□□□□□ -2.32
YPR172W	YPR172W	RFU1	Q08003	200 aa		0.58	□□□□□ -2.32
YPR172W	YPR172W	EFG1	Q3E705	233 aa	Known RBP	0.58	□□□□□ -2.32
YPR172W	YPR172W	RPS22B	Q3E7Y3	130 aa	Known RBP	0.58	□□□□□ -2.32
YPR172W	YPR172W	ROM2	P51862	1356 aa	Known RBP	0.57	□□□□□ -2.32
YPR172W	YPR172W	PHO13	P19881	312 aa		0.57	□□□□□ -2.32
YPR172W	YPR172W	SRP21	P32342	167 aa		0.57	□□□□□ -2.32
YPR172W	YPR172W	MRPL24	P36525	258 aa	Predicted RBP	0.57	□□□□□ -2.32
YPR172W	YPR172W	FIG1	P38224	298 aa		0.57	□□□□□ -2.32
YPR172W	YPR172W	RRT7	Q07829	113 aa		0.57	□□□□□ -2.32
YPR172W	YPR172W	PRM3	Q08931	133 aa		0.57	□□□□□ -2.32
YPR172W	YPR172W	PET20	Q99373	253 aa		0.57	□□□□□ -2.32
YPR172W	YPR172W	SED1	Q01589	338 aa		0.56	□□□□□ -2.32
YPR172W	YPR172W	CDC39	P25655	2108 aa	Known RBP	0.55	□□□□□ -2.32
YPR172W	YPR172W	DDR48	P18899	430 aa	Known RBP	0.55	□□□□□ -2.32
YPR172W	YPR172W	GPI2	P46961	280 aa		0.55	□□□□□ -2.32
YPR172W	YPR172W	YPR153W	Q06537	140 aa		0.55	□□□□□ -2.32
YPR172W	YPR172W	GPI11	Q06636	219 aa		0.55	□□□□□ -2.32
YPR172W	YPR172W	RIB3	Q99258	208 aa		0.55	□□□□□ -2.32
YPR172W	YPR172W	HSL1	P34244	1518 aa		0.54	□□□□□ -2.32
YPR172W	YPR172W	RPL33A	P05744	107 aa	Known RBP	0.54	□□□□□ -2.32
YPR172W	YPR172W	ARC19	P33204	171 aa	Known RBP	0.54	□□□□□ -2.32
YPR172W	YPR172W	YJL009W	P47078	108 aa		0.54	□□□□□ -2.32
YPR172W	YPR172W	VMA10	P48836	114 aa	Known RBP	0.54	□□□□□ -2.32
YPR172W	YPR172W	EST3	Q03096	181 aa		0.54	□□□□□ -2.32
YPR172W	YPR172W	SEN15	Q04675	128 aa		0.54	□□□□□ -2.32
YPR172W	YPR172W	NHP6A	P11632	93 aa	Known RBP	0.53	□□□□□ -2.32
YPR172W	YPR172W	YMR141C	P40211	102 aa		0.53	□□□□□ -2.32
YPR172W	YPR172W	IRC21	Q04772	201 aa		0.53	□□□□□ -2.32
YPR172W	YPR172W	SCS22	Q6Q595	175 aa		0.53	□□□□□ -2.32
YPR172W	YPR172W	COX5B	P00425	151 aa		0.52	□□□□□ -2.33
YPR172W	YPR172W	PET54	P10834	293 aa		0.52	□□□□□ -2.33
YPR172W	YPR172W	SRL3	P36167	246 aa		0.52	□□□□□ -2.33
YPR172W	YPR172W	IPI1	P38803	334 aa	Predicted RBP	0.51	□□□□□ -2.33
YPR172W	YPR172W	DIE2	P50076	525 aa		0.51	□□□□□ -2.33
YPR172W	YPR172W	YMR320W	Q04897	101 aa		0.51	□□□□□ -2.33
YPR172W	YPR172W	MHF1	Q3E835	90 aa		0.51	□□□□□ -2.33
YPR172W	YPR172W	HSP12	P22943	109 aa	Known RBP	0.5	□□□□□ -2.33
YPR172W	YPR172W	YGR201C	P42936	225 aa		0.5	□□□□□ -2.33
YPR172W	YPR172W	HUT1	Q12520	339 aa		0.5	□□□□□ -2.33
YPR172W	YPR172W	GSC2	P40989	1895 aa		0.5	□□□□□ -2.33
YPR172W	YPR172W	YOR1	P53049	1477 aa		0.49	□□□□□ -2.33
YPR172W	YPR172W	QCR6	P00127	147 aa		0.49	□□□□□ -2.33
YPR172W	YPR172W	YGL014C-A	P0C5N1	53 aa		0.49	□□□□□ -2.33
YPR172W	YPR172W	RPL43A	P0CX25	92 aa	Known RBP	0.49	□□□□□ -2.33
YPR172W	YPR172W	RPL43B	P0CX26	92 aa		0.49	□□□□□ -2.33
YPR172W	YPR172W	FYV5	P25585	152 aa		0.49	□□□□□ -2.33
YPR172W	YPR172W	YHR140W	P38842	239 aa		0.49	□□□□□ -2.33
YPR172W	YPR172W	YCL001W-A	P87012	153 aa		0.49	□□□□□ -2.33
YPR172W	YPR172W	RAV2	Q03956	351 aa		0.49	□□□□□ -2.33
YPR172W	YPR172W	RPS1B	P23248	255 aa	Known RBP	0.48	□□□□□ -2.33
YPR172W	YPR172W	MOG1	P47123	218 aa		0.48	□□□□□ -2.33
YPR172W	YPR172W	PKR1	Q03880	122 aa	Known RBP	0.48	□□□□□ -2.33
YPR172W	YPR172W	SOM1	Q05676	74 aa		0.48	□□□□□ -2.33
YPR172W	YPR172W	KTI11	Q3E840	82 aa		0.48	□□□□□ -2.33
YPR172W	YPR172W	COA6	Q3E846	104 aa		0.48	□□□□□ -2.33
YPR172W	YPR172W	YMR122C	Q03879	124 aa		0.47	□□□□□ -2.33
YPR172W	YPR172W	YOR385W	Q08909	290 aa		0.47	□□□□□ -2.33
YPR172W	YPR172W	SUI1	P32911	108 aa	Known RBP	0.46	□□□□□ -2.34
YPR172W	YPR172W	PHB1	P40961	287 aa		0.46	□□□□□ -2.34
YPR172W	YPR172W	LST8	P41318	303 aa		0.46	□□□□□ -2.34
YPR172W	YPR172W	MVB12	P42939	101 aa		0.46	□□□□□ -2.34
YPR172W	YPR172W	EFM5	P53200	248 aa	Known RBP	0.46	□□□□□ -2.34
YPR172W	YPR172W	YNL019C	P53975	284 aa		0.46	□□□□□ -2.34
YPR172W	YPR172W	YLR307C-A	Q3E825	87 aa		0.46	□□□□□ -2.34
YPR172W	YPR172W	DDP1	Q99321	188 aa	Known RBP	0.46	□□□□□ -2.34
YPR172W	YPR172W	RPL40A	P0CH08	128 aa	Known RBP	0.45	□□□□□ -2.34
YPR172W	YPR172W	RPL40B	P0CH09	128 aa	Known RBP	0.45	□□□□□ -2.34
YPR172W	YPR172W	TRS20	P38334	175 aa		0.45	□□□□□ -2.34
YPR172W	YPR172W	LSM1	P47017	172 aa	Known RBP	0.45	□□□□□ -2.34

Retrieved 100 of 5,963 RNA–protein pairs in 60 ms