RNA–Protein interactions for RNA: YLR277C

YSH1, Transcript of Putative endoribonuclease, yeastyeast

Gene YSH1, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSH1YLR277C MSA1Q08471 629 aa3.48□□□□□ -1.85
YSH1YLR277C RPL40AP0CH08 128 aaKnown RBP3.48□□□□□ -1.85
YSH1YLR277C RPL40BP0CH09 128 aaKnown RBP3.48□□□□□ -1.85
YSH1YLR277C YKL102CP34249 101 aa3.48□□□□□ -1.85
YSH1YLR277C SWD2P36104 329 aaPredicted RBP3.48□□□□□ -1.85
YSH1YLR277C MPM1P40364 252 aa3.48□□□□□ -1.85
YSH1YLR277C PAU5P43575 122 aa3.48□□□□□ -1.85
YSH1YLR277C AIM25P47140 327 aa3.48□□□□□ -1.85
YSH1YLR277C DSK2P48510 373 aa3.48□□□□□ -1.85
YSH1YLR277C YIL102C-AQ2V2P5 75 aa3.48□□□□□ -1.85
YSH1YLR277C SCS22Q6Q595 175 aa3.48□□□□□ -1.85
YSH1YLR277C KRE1P17260 313 aa3.47□□□□□ -1.85
YSH1YLR277C FIP1P45976 327 aa3.47□□□□□ -1.85
YSH1YLR277C EAF6P47128 113 aa3.47□□□□□ -1.85
YSH1YLR277C ALG9P53868 555 aaKnown RBP3.47□□□□□ -1.85
YSH1YLR277C ROT1Q03691 256 aa3.47□□□□□ -1.85
YSH1YLR277C DAD1Q12248 94 aa3.47□□□□□ -1.85
YSH1YLR277C YDR119W-AQ2V2P9 66 aa3.47□□□□□ -1.85
YSH1YLR277C PUB1P32588 453 aaKnown RBP RIP-Chip data3.47□□□□□ -1.85not detected
YSH1YLR277C SMP1P38128 452 aa3.47□□□□□ -1.85
YSH1YLR277C CPD1P53314 239 aa3.47□□□□□ -1.85
YSH1YLR277C YPL264CQ08980 353 aa3.47□□□□□ -1.85
YSH1YLR277C YDL180WQ12301 547 aa3.47□□□□□ -1.85
YSH1YLR277C SME1Q12330 94 aaPredicted RBP3.47□□□□□ -1.85
YSH1YLR277C SPO13P23624 291 aa3.46□□□□□ -1.86
YSH1YLR277C PAU16P35994 123 aa3.46□□□□□ -1.86
YSH1YLR277C YJL028WP47062 111 aa3.46□□□□□ -1.86
YSH1YLR277C YDL009CQ12210 107 aa3.46□□□□□ -1.86
YSH1YLR277C YLR122CQ12312 125 aa3.46□□□□□ -1.86
YSH1YLR277C RIM15P43565 1770 aa3.46□□□□□ -1.86
YSH1YLR277C URA5P13298 226 aaKnown RBP3.45□□□□□ -1.86
YSH1YLR277C MRP21P38175 177 aa3.45□□□□□ -1.86
YSH1YLR277C SHE1P38200 338 aa3.45□□□□□ -1.86
YSH1YLR277C INM1P38710 295 aa3.45□□□□□ -1.86
YSH1YLR277C RFM1Q12192 310 aa3.45□□□□□ -1.86
YSH1YLR277C PRS5Q12265 496 aaKnown RBP3.45□□□□□ -1.86
YSH1YLR277C YOR376W-AQ3E805 51 aa3.45□□□□□ -1.86
YSH1YLR277C MSB2P32334 1306 aa3.45□□□□□ -1.86
YSH1YLR277C AQY1P0CD91 305 aa3.45□□□□□ -1.86
YSH1YLR277C YBR292CP38357 123 aa3.45□□□□□ -1.86
YSH1YLR277C MED6P38782 295 aa3.45□□□□□ -1.86
YSH1YLR277C HTD2P38790 280 aaKnown RBP3.45□□□□□ -1.86
YSH1YLR277C GPI2P46961 280 aa3.45□□□□□ -1.86
YSH1YLR277C YGR164WP53291 111 aa3.45□□□□□ -1.86
YSH1YLR277C RRS1Q08746 203 aaKnown RBP3.45□□□□□ -1.86
YSH1YLR277C NCE102Q12207 173 aaRIP-Chip data3.45□□□□□ -1.86not detected
YSH1YLR277C NUP192P47054 1683 aa3.45□□□□□ -1.86
YSH1YLR277C CNE1P27825 502 aa3.44□□□□□ -1.86
YSH1YLR277C PHO88P38264 188 aaPredicted RBP3.44□□□□□ -1.86
YSH1YLR277C ARC40P38328 384 aaKnown RBP3.44□□□□□ -1.86
YSH1YLR277C HSP10P38910 106 aa3.44□□□□□ -1.86
YSH1YLR277C GAT4P40569 121 aa3.44□□□□□ -1.86
YSH1YLR277C COX19Q3E731 98 aa3.44□□□□□ -1.86
YSH1YLR277C MRS4P23500 304 aa3.44□□□□□ -1.86
YSH1YLR277C YBR144CP34215 104 aa3.44□□□□□ -1.86
YSH1YLR277C GPI18P38211 433 aa3.44□□□□□ -1.86
YSH1YLR277C SPL2P38839 148 aa3.44□□□□□ -1.86
YSH1YLR277C BXI1P48558 297 aa3.44□□□□□ -1.86
YSH1YLR277C YGL262WP53054 175 aa3.44□□□□□ -1.86
YSH1YLR277C ATO3Q12359 275 aa3.44□□□□□ -1.86
YSH1YLR277C GLT1Q12680 2145 aaKnown RBP3.44□□□□□ -1.86
YSH1YLR277C RRT15Q3E811 62 aa3.44□□□□□ -1.86
YSH1YLR277C Q0010Q9ZZX9 128 aa3.44□□□□□ -1.86
YSH1YLR277C SEC11P15367 167 aa3.43□□□□□ -1.86
YSH1YLR277C UMP1P38293 148 aa3.43□□□□□ -1.86
YSH1YLR277C YHL018WP38744 120 aaPredicted RBP3.43□□□□□ -1.86
YSH1YLR277C YER181CP40097 107 aa3.43□□□□□ -1.86
YSH1YLR277C OST1P41543 476 aaKnown RBP3.43□□□□□ -1.86
YSH1YLR277C MTR3P48240 250 aaPredicted RBP3.43□□□□□ -1.86
YSH1YLR277C YGL034CP53186 121 aa3.43□□□□□ -1.86
YSH1YLR277C MCH4Q08268 501 aa3.43□□□□□ -1.86
YSH1YLR277C TIM18Q08749 192 aa3.43□□□□□ -1.86
YSH1YLR277C ATG41Q12048 136 aa3.43□□□□□ -1.86
YSH1YLR277C YCL021W-AQ96VH3 125 aa3.43□□□□□ -1.86
YSH1YLR277C APC1P53886 1748 aa3.43□□□□□ -1.86
YSH1YLR277C RPA12P32529 125 aaKnown RBP3.43□□□□□ -1.86
YSH1YLR277C YKR073CP36153 106 aa3.43□□□□□ -1.86
YSH1YLR277C CTF8P38877 133 aa3.43□□□□□ -1.86
YSH1YLR277C MIC27P50945 234 aa3.43□□□□□ -1.86
YSH1YLR277C YNL234WP53857 426 aa3.43□□□□□ -1.86
YSH1YLR277C YAL063C-AQ3E791 96 aa3.43□□□□□ -1.86
YSH1YLR277C UBR2Q07963 1872 aa3.42□□□□□ -1.86
YSH1YLR277C RPB7P34087 171 aa3.42□□□□□ -1.86
YSH1YLR277C SDS23P53172 527 aa3.42□□□□□ -1.86
YSH1YLR277C MST27P53176 234 aa3.42□□□□□ -1.86
YSH1YLR277C YDR042CQ03205 200 aa3.42□□□□□ -1.86
YSH1YLR277C ASM4Q05166 528 aa3.42□□□□□ -1.86
YSH1YLR277C YOL160WQ08321 113 aa3.42□□□□□ -1.86
YSH1YLR277C MRH1Q12117 320 aaPredicted RBP3.42□□□□□ -1.86
YSH1YLR277C MPD1Q12404 318 aaKnown RBP3.42□□□□□ -1.86
YSH1YLR277C YPL247CQ12523 523 aa3.42□□□□□ -1.86
YSH1YLR277C CYR1P08678 2026 aaKnown RBP3.42□□□□□ -1.86
YSH1YLR277C UBC4P15731 148 aa3.42□□□□□ -1.86
YSH1YLR277C NHP2P32495 156 aaPredicted RBP3.42□□□□□ -1.86
YSH1YLR277C PHS1P40857 217 aa3.42□□□□□ -1.86
YSH1YLR277C SWS2P53937 143 aa3.42□□□□□ -1.86
YSH1YLR277C SMD1Q02260 146 aaPredicted RBP3.42□□□□□ -1.86
YSH1YLR277C IRC25Q07951 179 aa3.42□□□□□ -1.86
YSH1YLR277C YCR024C-BQ3E7Z8 88 aa3.42□□□□□ -1.86
YSH1YLR277C YOL162WP0CF19 215 aa3.41□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms