RNA–Protein interactions for RNA: YHR154W

RTT107, Transcript of Protein implicated in Mms22-dependent DNA repair during S phase, yeastyeast

Gene RTT107, Length 3,213 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT107YHR154W YLR462WO13556 202 aa1.54□□□□□ -2.16
RTT107YHR154W TIR1P10863 254 aa1.54□□□□□ -2.16
RTT107YHR154W RPS20P38701 121 aaKnown RBP1.54□□□□□ -2.16
RTT107YHR154W MIC19P43594 170 aa1.54□□□□□ -2.16
RTT107YHR154W YFR054CP43622 192 aa1.54□□□□□ -2.16
RTT107YHR154W GPI14P47088 403 aaKnown RBP1.54□□□□□ -2.16
RTT107YHR154W RBL2P48606 106 aaKnown RBP1.54□□□□□ -2.16
RTT107YHR154W YGR219WP53307 113 aa1.54□□□□□ -2.16
RTT107YHR154W OSH6Q02201 448 aa1.54□□□□□ -2.16
RTT107YHR154W THI74Q04083 370 aa1.54□□□□□ -2.16
RTT107YHR154W MRX8Q05473 314 aa1.54□□□□□ -2.16
RTT107YHR154W ATG5Q12380 294 aa1.54□□□□□ -2.16
RTT107YHR154W SLH1P53327 1967 aaKnown RBP1.54□□□□□ -2.16
RTT107YHR154W UBI4P0CG63 381 aaKnown RBP1.54□□□□□ -2.16
RTT107YHR154W RPC19P28000 142 aaKnown RBP1.54□□□□□ -2.16
RTT107YHR154W SEC17P32602 292 aa1.54□□□□□ -2.16
RTT107YHR154W UTP30P36144 274 aaKnown RBP1.54□□□□□ -2.16
RTT107YHR154W CSH1P38287 376 aa1.54□□□□□ -2.16
RTT107YHR154W TTI2P47168 421 aa1.54□□□□□ -2.16
RTT107YHR154W YMR099CQ03161 297 aaKnown RBP1.54□□□□□ -2.16
RTT107YHR154W CSN9Q03981 162 aa1.54□□□□□ -2.16
RTT107YHR154W YDR391CQ04170 232 aa1.54□□□□□ -2.16
RTT107YHR154W YHR213W-AQ8TGT4 77 aa1.54□□□□□ -2.16
RTT107YHR154W BPH1P25356 2167 aa1.53□□□□□ -2.16
RTT107YHR154W ADK1P07170 222 aaKnown RBP1.53□□□□□ -2.16
RTT107YHR154W YFR010W-AP0C5N0 62 aa1.53□□□□□ -2.16
RTT107YHR154W SRP21P32342 167 aa1.53□□□□□ -2.16
RTT107YHR154W SWD3P38123 315 aa1.53□□□□□ -2.16
RTT107YHR154W ERJ5P43613 295 aaPredicted RBP1.53□□□□□ -2.16
RTT107YHR154W SRL1Q08673 210 aa1.53□□□□□ -2.16
RTT107YHR154W URA5P13298 226 aaKnown RBP1.53□□□□□ -2.16
RTT107YHR154W ARO2P28777 376 aaKnown RBP1.53□□□□□ -2.16
RTT107YHR154W SNC2P33328 115 aa1.53□□□□□ -2.16
RTT107YHR154W RPF1P38805 295 aaKnown RBP1.53□□□□□ -2.16
RTT107YHR154W YNL010WP53981 241 aaKnown RBP1.53□□□□□ -2.16
RTT107YHR154W COF1Q03048 143 aaKnown RBP1.53□□□□□ -2.16
RTT107YHR154W DIG2Q03373 323 aaKnown RBP1.53□□□□□ -2.16
RTT107YHR154W TVP15Q03860 143 aa1.53□□□□□ -2.16
RTT107YHR154W URA2P07259 2214 aaKnown RBP1.53□□□□□ -2.16
RTT107YHR154W SPO13P23624 291 aa1.53□□□□□ -2.17
RTT107YHR154W YPL073CP40323 161 aa1.53□□□□□ -2.17
RTT107YHR154W PGA1P53896 198 aa1.53□□□□□ -2.17
RTT107YHR154W APS2Q00381 147 aa1.53□□□□□ -2.17
RTT107YHR154W MRPS16Q02608 121 aa1.53□□□□□ -2.17
RTT107YHR154W SCW10Q04951 389 aa1.53□□□□□ -2.17
RTT107YHR154W CBP6P07253 162 aaPredicted RBP1.52□□□□□ -2.17
RTT107YHR154W YGL041W-AP0C5N3 154 aa1.52□□□□□ -2.17
RTT107YHR154W HAP3P13434 144 aa1.52□□□□□ -2.17
RTT107YHR154W GLC8P41818 229 aa1.52□□□□□ -2.17
RTT107YHR154W PFS2P42841 465 aaKnown RBP1.52□□□□□ -2.17
RTT107YHR154W VPS28Q02767 242 aa1.52□□□□□ -2.17
RTT107YHR154W NEJ1Q06148 342 aa1.52□□□□□ -2.17
RTT107YHR154W YPL225WQ08971 146 aaKnown RBP1.52□□□□□ -2.17
RTT107YHR154W SPC3Q12133 184 aa1.52□□□□□ -2.17
RTT107YHR154W DGK1Q12382 290 aa1.52□□□□□ -2.17
RTT107YHR154W YBL112CQ3E7Y4 105 aa1.52□□□□□ -2.17
RTT107YHR154W YHR032W-AP0C5N6 59 aa1.52□□□□□ -2.17
RTT107YHR154W NSG1P38837 291 aa1.52□□□□□ -2.17
RTT107YHR154W SER2P42941 309 aa1.52□□□□□ -2.17
RTT107YHR154W GPI2P46961 280 aa1.52□□□□□ -2.17
RTT107YHR154W TDA4P47153 279 aa1.52□□□□□ -2.17
RTT107YHR154W DSK2P48510 373 aa1.52□□□□□ -2.17
RTT107YHR154W YNL033WP53964 284 aa1.52□□□□□ -2.17
RTT107YHR154W YNL019CP53975 284 aa1.52□□□□□ -2.17
RTT107YHR154W YDR274CP87283 123 aa1.52□□□□□ -2.17
RTT107YHR154W RNH202Q05635 350 aa1.52□□□□□ -2.17
RTT107YHR154W TIR4Q12218 487 aaPredicted RBP1.52□□□□□ -2.17
RTT107YHR154W TIM9O74700 87 aa1.51□□□□□ -2.17
RTT107YHR154W REP2P03872 296 aa1.51□□□□□ -2.17
RTT107YHR154W RPB3P16370 318 aaKnown RBP1.51□□□□□ -2.17
RTT107YHR154W ERV15P38312 142 aa1.51□□□□□ -2.17
RTT107YHR154W DOC1P53068 250 aa1.51□□□□□ -2.17
RTT107YHR154W CAB4P53332 305 aa1.51□□□□□ -2.17
RTT107YHR154W FYV7Q12247 151 aa1.51□□□□□ -2.17
RTT107YHR154W YNL277W-AQ3E7Z0 62 aa1.51□□□□□ -2.17
RTT107YHR154W COX10P21592 462 aa1.51□□□□□ -2.17
RTT107YHR154W PAN3P36102 679 aaPredicted RBP1.51□□□□□ -2.17
RTT107YHR154W YHR125WP38831 101 aa1.51□□□□□ -2.17
RTT107YHR154W KRE9P39005 276 aa1.51□□□□□ -2.17
RTT107YHR154W YEA6P39953 335 aa1.51□□□□□ -2.17
RTT107YHR154W IRC22P40006 225 aa1.51□□□□□ -2.17
RTT107YHR154W ARC15P40518 154 aaRIP-Chip data1.51□□□□□ -2.17not detected
RTT107YHR154W FIP1P45976 327 aa1.51□□□□□ -2.17
RTT107YHR154W YPL247CQ12523 523 aa1.51□□□□□ -2.17
RTT107YHR154W DDP1Q99321 188 aaKnown RBP1.51□□□□□ -2.17
RTT107YHR154W PHO13P19881 312 aa1.51□□□□□ -2.17
RTT107YHR154W SHE2P36068 246 aaKnown RBP RIP-Chip data1.51□□□□□ -2.17not detected
RTT107YHR154W YKR032WP36127 104 aa1.51□□□□□ -2.17
RTT107YHR154W ETR1P38071 380 aa1.51□□□□□ -2.17
RTT107YHR154W DLS1P40366 167 aa1.51□□□□□ -2.17
RTT107YHR154W ECM19Q06011 112 aa1.51□□□□□ -2.17
RTT107YHR154W ATP5P09457 212 aa1.5□□□□□ -2.17
RTT107YHR154W YSF3P0C074 85 aaPredicted RBP1.5□□□□□ -2.17
RTT107YHR154W UBC5P15732 148 aa1.5□□□□□ -2.17
RTT107YHR154W YER135CP40082 130 aa1.5□□□□□ -2.17
RTT107YHR154W GON7P46984 123 aa1.5□□□□□ -2.17
RTT107YHR154W YAE1P47118 141 aaPredicted RBP1.5□□□□□ -2.17
RTT107YHR154W YGL230CP53074 147 aa1.5□□□□□ -2.17
RTT107YHR154W YGL088WP53151 121 aa1.5□□□□□ -2.17
RTT107YHR154W YGR039WP53225 103 aa1.5□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms