RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 ACSS2Q9NR19 701 aa5.37□□□□□ -1.55
CDC42EP3-202ENST00000422687 TOPORSQ9NS56 1045 aaPredicted RBP5.37□□□□□ -1.55
CDC42EP3-202ENST00000422687 IP6K2Q9UHH9 426 aa5.37□□□□□ -1.55
CDC42EP3-202ENST00000422687 ANAPC4Q9UJX5 808 aa5.37□□□□□ -1.55
CDC42EP3-202ENST00000422687 PNMA2Q9UL42 364 aa5.37□□□□□ -1.55
CDC42EP3-202ENST00000422687 CCPG1Q9ULG6 757 aa5.37□□□□□ -1.55
CDC42EP3-202ENST00000422687 DDX19BQ9UMR2 479 aa5.37□□□□□ -1.55
CDC42EP3-202ENST00000422687 WDR19Q8NEZ3 1342 aa5.37□□□□□ -1.55
CDC42EP3-202ENST00000422687 RAD50Q92878 1312 aa5.37□□□□□ -1.55
CDC42EP3-202ENST00000422687 SPTBN4Q9H254 2564 aa5.37□□□□□ -1.55
CDC42EP3-202ENST00000422687 TANC1Q9C0D5 1861 aa5.37□□□□□ -1.55
CDC42EP3-202ENST00000422687 GOLGA6CA6NDK9 693 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 GOLGA6BA6NDN3 693 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 HAS3O00219 553 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 DCXO43602 365 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 ORC4O43929 436 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 PCDHGA12O60330 932 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 NMT2O60551 498 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 PEX14O75381 377 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 DGKIO75912 1065 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 KRT37O76014 449 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 FUCA1P04066 466 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 SLC3A2P08195 630 aaKnown RBP5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 GOLGA6DP0CG33 693 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 SNHG28P0DPA3 235 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 CKBP12277 381 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 IL9P15248 144 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 KCNA5P22460 613 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 TXKP42681 527 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 GPR3P46089 330 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 SLC6A11P48066 632 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 KIF11P52732 1056 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 RPS6P62753 249 aaKnown RBP5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 ZP2Q05996 745 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 PPARAQ07869 468 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 ARHGAP1Q07960 439 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 BNIP3Q12983 259 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 IKQ13123 557 aaPredicted RBP5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 PLCL1Q15111 1095 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 PTGISQ16647 500 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 HSF5Q4G112 596 aaPredicted RBP5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 ESRP1Q6NXG1 681 aaKnown RBP5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 LRRC8DQ7L1W4 858 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 TMCO2Q7Z6W1 182 aaPredicted RBP5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 CMTR2Q8IYT2 770 aaKnown RBP5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 NLGN4XQ8N0W4 816 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 LZTR1Q8N653 840 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 MRPL38Q96DV4 380 aaKnown RBP5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 NACAP1Q9BZK3 213 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 MS4A5Q9H3V2 200 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 CARS2Q9HA77 564 aaKnown RBP5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 TCP11L1Q9NUJ3 509 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 GOLGA6AQ9NYA3 693 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 ACSL6Q9UKU0 697 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 DSEQ9UL01 958 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 COA3Q9Y2R0 106 aaPredicted RBP5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 GIT1Q9Y2X7 761 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 RWDD3Q9Y3V2 267 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 PCDHGA9Q9Y5G4 932 aaKnown RBP5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 PCDHGA8Q9Y5G5 932 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 PCDHGA7Q9Y5G6 932 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 PCDHGA6Q9Y5G7 932 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 PCDHGA3Q9Y5H0 932 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 PCDHGA2Q9Y5H1 932 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 COL4A4P53420 1690 aaPredicted RBP5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 COL4A6Q14031 1691 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 MYH7P12883 1935 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 PTPRSQ13332 1948 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 MYH4Q9Y623 1939 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 ZDBF2Q9HCK1 2354 aa5.36□□□□□ -1.55
CDC42EP3-202ENST00000422687 DCHS1Q96JQ0 3298 aa5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 NOTOA8MTQ0 251 aa5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 KRIT1O00522 736 aa5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 KCNK3O14649 394 aa5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 TPD52L2O43399 206 aaKnown RBP5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 HIP1RO75146 1068 aa5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 TADA3O75528 432 aa5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 SNUPNO95149 360 aaKnown RBP5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 CYP17A1P05093 508 aa5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 MMP3P08254 477 aa5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 TXNP10599 105 aaKnown RBP5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 SDHAP31040 664 aa5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 HOXC8P31273 242 aa5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 SLC16A2P36021 539 aa5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 FNTBP49356 437 aa5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 MVKQ03426 396 aa5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 ODF1Q14990 250 aa5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 PDCD1Q15116 288 aa5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 EPHA7Q15375 998 aa5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 ALX1Q15699 326 aa5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 GFOD2Q3B7J2 385 aa5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 RNF207Q6ZRF8 634 aa5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 CMIPQ8IY22 773 aa5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 ANKS4BQ8N8V4 417 aa5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 AFG1LQ8WV93 481 aa5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 PMM1Q92871 262 aa5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 PABPC5Q96DU9 382 aaKnown RBP5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 SNX27Q96L92 541 aa5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 C16orf92Q96LL3 132 aa5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 SAMD11Q96NU1 681 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms