RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 AEBP2Q6ZN18 517 aaPredicted RBP19.23■□□□□ 0.67
CDC42EP3-202ENST00000422687 CHIC1Q5VXU3 224 aa18.58■□□□□ 0.56
CDC42EP3-202ENST00000422687 SENP3Q9H4L4 574 aaPredicted RBP16.38■□□□□ 0.21
CDC42EP3-202ENST00000422687 PHF23Q9BUL5 403 aaPredicted RBP16.28■□□□□ 0.2
CDC42EP3-202ENST00000422687 FOXD1Q16676 465 aa15.2■□□□□ 0.02
CDC42EP3-202ENST00000422687 POTEDQ86YR6 584 aa15.02■□□□□ -0
CDC42EP3-202ENST00000422687 PLPPR3Q6T4P5 718 aa14.97□□□□□ -0.01
CDC42EP3-202ENST00000422687 PPP6R1Q9UPN7 881 aa14.42□□□□□ -0.1
CDC42EP3-202ENST00000422687 MSH5O43196 834 aa14.41□□□□□ -0.1
CDC42EP3-202ENST00000422687 ADRA2BP18089 450 aa14.36□□□□□ -0.11
CDC42EP3-202ENST00000422687 PIAS4Q8N2W9 510 aaPredicted RBP14.25□□□□□ -0.13
CDC42EP3-202ENST00000422687 SCAF1Q9H7N4 1312 aaKnown RBP13.19□□□□□ -0.3
CDC42EP3-202ENST00000422687 PPP4R3CPQ6ZMV5 832 aa13.14□□□□□ -0.31
CDC42EP3-202ENST00000422687 MAPK8IP2Q13387 824 aaPredicted RBP13.1□□□□□ -0.31
CDC42EP3-202ENST00000422687 DMRT2Q9Y5R5 561 aa13.04□□□□□ -0.32
CDC42EP3-202ENST00000422687 CNKSR2Q8WXI2 1034 aa12.85□□□□□ -0.35
CDC42EP3-202ENST00000422687 NCBP3Q53F19 620 aaKnown RBP12.73□□□□□ -0.37
CDC42EP3-202ENST00000422687 HOXD11P31277 338 aaPredicted RBP12.7□□□□□ -0.38
CDC42EP3-202ENST00000422687 CACNB1Q02641 598 aaPredicted RBP12.69□□□□□ -0.38
CDC42EP3-202ENST00000422687 RNF216Q9NWF9 866 aaPredicted RBP12.67□□□□□ -0.38
CDC42EP3-202ENST00000422687 NPM3O75607 178 aaKnown RBP12.54□□□□□ -0.4
CDC42EP3-202ENST00000422687 KCNA4P22459 653 aa12.54□□□□□ -0.4
CDC42EP3-202ENST00000422687 DCAF8L1A6NGE4 600 aa12.37□□□□□ -0.43
CDC42EP3-202ENST00000422687 DNAJC5BQ9UF47 199 aa12.36□□□□□ -0.43
CDC42EP3-202ENST00000422687 RNF39Q9H2S5 420 aa12.24□□□□□ -0.45
CDC42EP3-202ENST00000422687 C1QBPQ07021 282 aaKnown RBP12.03□□□□□ -0.48
CDC42EP3-202ENST00000422687 EHMT2Q96KQ7 1210 aa12.03□□□□□ -0.48
CDC42EP3-202ENST00000422687 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.01□□□□□ -0.49
CDC42EP3-202ENST00000422687 SLC4A2P04920 1241 aa11.91□□□□□ -0.5
CDC42EP3-202ENST00000422687 SLC4A1APQ9BWU0 796 aaKnown RBP11.9□□□□□ -0.5
CDC42EP3-202ENST00000422687 U3KPZ7 1027 aaPredicted RBP11.84□□□□□ -0.51
CDC42EP3-202ENST00000422687 CSRNP3Q8WYN3 585 aa11.75□□□□□ -0.53
CDC42EP3-202ENST00000422687 NISCHQ9Y2I1 1504 aa11.72□□□□□ -0.53
CDC42EP3-202ENST00000422687 POTEHQ6S545 545 aa11.66□□□□□ -0.54
CDC42EP3-202ENST00000422687 FOXD4L1Q9NU39 408 aa11.65□□□□□ -0.54
CDC42EP3-202ENST00000422687 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.63□□□□□ -0.55
CDC42EP3-202ENST00000422687 HNRNPUL2Q1KMD3 747 aaKnown RBP11.63□□□□□ -0.55
CDC42EP3-202ENST00000422687 MYCNP04198 464 aaPredicted RBP11.62□□□□□ -0.55
CDC42EP3-202ENST00000422687 APLP2Q06481 763 aa11.57□□□□□ -0.56
CDC42EP3-202ENST00000422687 SAMD1Q6SPF0 538 aaPredicted RBP11.57□□□□□ -0.56
CDC42EP3-202ENST00000422687 ZBTB22O15209 634 aa11.56□□□□□ -0.56
CDC42EP3-202ENST00000422687 SPINK5Q9NQ38 1064 aaPredicted RBP11.55□□□□□ -0.56
CDC42EP3-202ENST00000422687 CAPN15O75808 1086 aa11.48□□□□□ -0.57
CDC42EP3-202ENST00000422687 ZNF219Q9P2Y4 722 aaPredicted RBP11.44□□□□□ -0.58
CDC42EP3-202ENST00000422687 DSG3P32926 999 aa11.41□□□□□ -0.58
CDC42EP3-202ENST00000422687 TRHP20396 242 aaPredicted RBP11.36□□□□□ -0.59
CDC42EP3-202ENST00000422687 ATXN8OSP0DMR3 200 aa11.3□□□□□ -0.6
CDC42EP3-202ENST00000422687 ATF5Q9Y2D1 282 aaPredicted RBP11.27□□□□□ -0.61
CDC42EP3-202ENST00000422687 ABCB7O75027 752 aa11.23□□□□□ -0.61
CDC42EP3-202ENST00000422687 POLA2Q14181 598 aa11.15□□□□□ -0.62
CDC42EP3-202ENST00000422687 ZBTB12Q9Y330 459 aaPredicted RBP11.02□□□□□ -0.65
CDC42EP3-202ENST00000422687 RBM42Q9BTD8 480 aaKnown RBP10.9□□□□□ -0.66
CDC42EP3-202ENST00000422687 FBLN2P98095 1184 aa10.83□□□□□ -0.68
CDC42EP3-202ENST00000422687 MKRN4PQ13434 485 aaPredicted RBP10.8□□□□□ -0.68
CDC42EP3-202ENST00000422687 OSCARQ8IYS5 282 aa10.8□□□□□ -0.68
CDC42EP3-202ENST00000422687 CHRDL2Q6WN34 429 aa10.75□□□□□ -0.69
CDC42EP3-202ENST00000422687 AKT1S1Q96B36 256 aa10.71□□□□□ -0.69
CDC42EP3-202ENST00000422687 SPDYE2BA6NHP3 402 aa10.7□□□□□ -0.7
CDC42EP3-202ENST00000422687 SPDYE6P0CI01 402 aa10.7□□□□□ -0.7
CDC42EP3-202ENST00000422687 SPDYE2Q495Y8 402 aa10.7□□□□□ -0.7
CDC42EP3-202ENST00000422687 ABCC9O60706 1549 aa10.69□□□□□ -0.7
CDC42EP3-202ENST00000422687 SP7Q8TDD2 431 aaPredicted RBP10.67□□□□□ -0.7
CDC42EP3-202ENST00000422687 SSUH2Q9Y2M2 353 aa10.61□□□□□ -0.71
CDC42EP3-202ENST00000422687 REM2Q8IYK8 340 aaPredicted RBP10.58□□□□□ -0.72
CDC42EP3-202ENST00000422687 CCDC180Q9P1Z9 1646 aa10.56□□□□□ -0.72
CDC42EP3-202ENST00000422687 ZNF692Q9BU19 519 aaPredicted RBP10.56□□□□□ -0.72
CDC42EP3-202ENST00000422687 FKBP8Q14318 412 aa10.53□□□□□ -0.72
CDC42EP3-202ENST00000422687 AMER1Q5JTC6 1135 aaPredicted RBP10.51□□□□□ -0.73
CDC42EP3-202ENST00000422687 RTN4Q9NQC3 1192 aaKnown RBP10.49□□□□□ -0.73
CDC42EP3-202ENST00000422687 PITPNM1O00562 1244 aa10.46□□□□□ -0.73
CDC42EP3-202ENST00000422687 SPDYE4A6NLX3 237 aa10.42□□□□□ -0.74
CDC42EP3-202ENST00000422687 PABPN1Q86U42 306 aaKnown RBP eCLIP10.41□□□□□ -0.74
CDC42EP3-202ENST00000422687 SPDYE1Q8NFV5 336 aaPredicted RBP10.41□□□□□ -0.74
CDC42EP3-202ENST00000422687 PIP4P2Q8N4L2 257 aa10.37□□□□□ -0.75
CDC42EP3-202ENST00000422687 FXR2P51116 673 aaKnown RBP eCLIP10.35□□□□□ -0.75
CDC42EP3-202ENST00000422687 HAX1O00165 279 aa10.33□□□□□ -0.76
CDC42EP3-202ENST00000422687 PROM2Q8N271 834 aa10.32□□□□□ -0.76
CDC42EP3-202ENST00000422687 CLEC11AQ9Y240 323 aa10.31□□□□□ -0.76
CDC42EP3-202ENST00000422687 SLC24A1O60721 1099 aa10.29□□□□□ -0.76
CDC42EP3-202ENST00000422687 STAG3Q9UJ98 1225 aa10.25□□□□□ -0.77
CDC42EP3-202ENST00000422687 PRR29P0C7W0 189 aa10.22□□□□□ -0.77
CDC42EP3-202ENST00000422687 PRKAR2AP13861 404 aaKnown RBP10.18□□□□□ -0.78
CDC42EP3-202ENST00000422687 EVX2Q03828 476 aa10.16□□□□□ -0.78
CDC42EP3-202ENST00000422687 RB1CC1Q8TDY2 1594 aa10.13□□□□□ -0.79
CDC42EP3-202ENST00000422687 CHADLQ6NUI6 762 aa10.1□□□□□ -0.79
CDC42EP3-202ENST00000422687 CREBZFQ9NS37 354 aa10.07□□□□□ -0.8
CDC42EP3-202ENST00000422687 NACADO15069 1562 aa10.05□□□□□ -0.8
CDC42EP3-202ENST00000422687 FBXO3Q9UK99 471 aa10.03□□□□□ -0.8
CDC42EP3-202ENST00000422687 FARP1Q9Y4F1 1045 aaPredicted RBP10.02□□□□□ -0.81
CDC42EP3-202ENST00000422687 C19orf67A6NJJ6 358 aa10□□□□□ -0.81
CDC42EP3-202ENST00000422687 LHX8Q68G74 356 aa9.99□□□□□ -0.81
CDC42EP3-202ENST00000422687 MNX1P50219 401 aaPredicted RBP9.96□□□□□ -0.82
CDC42EP3-202ENST00000422687 MYO15BQ96JP2 1530 aa9.92□□□□□ -0.82
CDC42EP3-202ENST00000422687 VASPP50552 380 aaPredicted RBP9.91□□□□□ -0.82
CDC42EP3-202ENST00000422687 GABBR2O75899 941 aa9.9□□□□□ -0.82
CDC42EP3-202ENST00000422687 NPM1P06748 294 aaKnown RBP eCLIP9.89□□□□□ -0.83
CDC42EP3-202ENST00000422687 BICRAQ9NZM4 1560 aa9.88□□□□□ -0.83
CDC42EP3-202ENST00000422687 PLEKHG5O94827 1062 aa9.87□□□□□ -0.83
CDC42EP3-202ENST00000422687 CD44P16070 742 aaKnown RBP9.87□□□□□ -0.83
CDC42EP3-202ENST00000422687 MIER1Q8N108 512 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 207.8 ms