RNA–Protein interactions for RNA: YOR373W

NUD1, Transcript of Component of the spindle pole body outer plaque, yeast

Gene NUD1, Length 2,556 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUD1	YOR373W	TRA1	P38811	3744 aa		4.58	□□□□□ -1.68
NUD1	YOR373W	CDC39	P25655	2108 aa	Known RBP	4.58	□□□□□ -1.68
NUD1	YOR373W	ADK1	P07170	222 aa	Known RBP	4.58	□□□□□ -1.68
NUD1	YOR373W	UPS1	Q05776	175 aa		4.58	□□□□□ -1.68
NUD1	YOR373W	SEC4	P07560	215 aa	Known RBP	4.57	□□□□□ -1.68
NUD1	YOR373W	PEX4	P29340	183 aa		4.57	□□□□□ -1.68
NUD1	YOR373W	LAG1	P38703	411 aa		4.57	□□□□□ -1.68
NUD1	YOR373W	PRM5	P40476	318 aa		4.57	□□□□□ -1.68
NUD1	YOR373W	AVT4	P50944	713 aa		4.57	□□□□□ -1.68
NUD1	YOR373W	LAS17	Q12446	633 aa		4.57	□□□□□ -1.68
NUD1	YOR373W	GEP4	P38812	185 aa		4.57	□□□□□ -1.68
NUD1	YOR373W	MIT1	P40002	666 aa		4.57	□□□□□ -1.68
NUD1	YOR373W	YER188W	P40103	239 aa		4.57	□□□□□ -1.68
NUD1	YOR373W	YLR099W-A	Q3E798	87 aa		4.57	□□□□□ -1.68
NUD1	YOR373W	CCS1	P40202	249 aa	Known RBP	4.56	□□□□□ -1.68
NUD1	YOR373W	DIE2	P50076	525 aa		4.56	□□□□□ -1.68
NUD1	YOR373W	RSM27	P53305	110 aa		4.56	□□□□□ -1.68
NUD1	YOR373W	ATP23	P53722	227 aa		4.56	□□□□□ -1.68
NUD1	YOR373W	ERG24	P32462	438 aa	Known RBP	4.56	□□□□□ -1.68
NUD1	YOR373W	SNC2	P33328	115 aa		4.56	□□□□□ -1.68
NUD1	YOR373W	YNR064C	P53750	290 aa		4.56	□□□□□ -1.68
NUD1	YOR373W	SPG4	Q04438	115 aa		4.56	□□□□□ -1.68
NUD1	YOR373W	YMR317W	Q04893	1140 aa		4.56	□□□□□ -1.68
NUD1	YOR373W	CNL1	Q06333	122 aa		4.56	□□□□□ -1.68
NUD1	YOR373W	FSF1	Q12029	327 aa	Known RBP	4.56	□□□□□ -1.68
NUD1	YOR373W	YEL009C-A	A0A023PZF2	135 aa		4.55	□□□□□ -1.68
NUD1	YOR373W	SIR2	P06700	562 aa		4.55	□□□□□ -1.68
NUD1	YOR373W	MIR1	P23641	311 aa	Known RBP	4.55	□□□□□ -1.68
NUD1	YOR373W	YFL015C	P43578	164 aa		4.55	□□□□□ -1.68
NUD1	YOR373W	ATG18	P43601	500 aa		4.55	□□□□□ -1.68
NUD1	YOR373W	AIM25	P47140	327 aa		4.55	□□□□□ -1.68
NUD1	YOR373W	SOL1	P50278	321 aa		4.55	□□□□□ -1.68
NUD1	YOR373W	LSM7	P53905	115 aa	Known RBP	4.55	□□□□□ -1.68
NUD1	YOR373W	YMR253C	Q04835	414 aa		4.55	□□□□□ -1.68
NUD1	YOR373W	CSI2	Q08054	341 aa		4.55	□□□□□ -1.68
NUD1	YOR373W	AIR2	Q12476	344 aa	Known RBP	4.55	□□□□□ -1.68
NUD1	YOR373W	YCR007C	P25354	239 aa		4.55	□□□□□ -1.68
NUD1	YOR373W	ALK2	P32789	676 aa	Predicted RBP	4.55	□□□□□ -1.68
NUD1	YOR373W	PDC2	P32896	925 aa		4.55	□□□□□ -1.68
NUD1	YOR373W	TMA19	P35691	167 aa	Known RBP	4.55	□□□□□ -1.68
NUD1	YOR373W	PAN3	P36102	679 aa	Predicted RBP	4.55	□□□□□ -1.68
NUD1	YOR373W	YEA4	P40004	342 aa		4.55	□□□□□ -1.68
NUD1	YOR373W	TIR3	P40552	269 aa		4.55	□□□□□ -1.68
NUD1	YOR373W	TMA23	Q03525	211 aa		4.55	□□□□□ -1.68
NUD1	YOR373W	PRM4	Q12498	284 aa		4.55	□□□□□ -1.68
NUD1	YOR373W	CCW14	O13547	238 aa		4.54	□□□□□ -1.68
NUD1	YOR373W	PBI2	P0CT04	75 aa	Known RBP	4.54	□□□□□ -1.68
NUD1	YOR373W	RPL2A	P0CX45	254 aa	Known RBP	4.54	□□□□□ -1.68
NUD1	YOR373W	RPL2B	P0CX46	254 aa	Known RBP	4.54	□□□□□ -1.68
NUD1	YOR373W	PMU1	P36069	295 aa		4.54	□□□□□ -1.68
NUD1	YOR373W	YCR041W	P37265	110 aa		4.54	□□□□□ -1.68
NUD1	YOR373W	RPA43	P46669	326 aa		4.54	□□□□□ -1.68
NUD1	YOR373W	LIP2	Q06005	328 aa		4.54	□□□□□ -1.68
NUD1	YOR373W	ATG39	Q06159	398 aa		4.54	□□□□□ -1.68
NUD1	YOR373W	PCL1	P24867	279 aa		4.54	□□□□□ -1.68
NUD1	YOR373W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
NUD1	YOR373W	NAT2	P37293	288 aa		4.54	□□□□□ -1.68
NUD1	YOR373W	TRS20	P38334	175 aa		4.54	□□□□□ -1.68
NUD1	YOR373W	RNH201	P53942	307 aa		4.54	□□□□□ -1.68
NUD1	YOR373W	BET5	Q03630	159 aa		4.54	□□□□□ -1.68
NUD1	YOR373W	YCL048W-A	Q2V2Q2	79 aa		4.54	□□□□□ -1.68
NUD1	YOR373W	VMA11	P32842	164 aa		4.53	□□□□□ -1.68
NUD1	YOR373W	SYS1	P41544	203 aa		4.53	□□□□□ -1.68
NUD1	YOR373W	GON7	P46984	123 aa		4.53	□□□□□ -1.68
NUD1	YOR373W	ERV29	P53337	310 aa		4.53	□□□□□ -1.68
NUD1	YOR373W	COF1	Q03048	143 aa	Known RBP	4.53	□□□□□ -1.68
NUD1	YOR373W	SHH4	Q06236	168 aa		4.53	□□□□□ -1.68
NUD1	YOR373W	FRE8	Q12209	686 aa		4.53	□□□□□ -1.68
NUD1	YOR373W	RPL39	P04650	51 aa		4.53	□□□□□ -1.68
NUD1	YOR373W	SPS2	P08459	502 aa		4.53	□□□□□ -1.68
NUD1	YOR373W	YND1	P40009	630 aa		4.53	□□□□□ -1.68
NUD1	YOR373W	DFG10	P40526	253 aa		4.53	□□□□□ -1.68
NUD1	YOR373W	GWT1	P47026	490 aa		4.53	□□□□□ -1.68
NUD1	YOR373W	MCH1	Q07376	486 aa		4.53	□□□□□ -1.68
NUD1	YOR373W	YBL112C	Q3E7Y4	105 aa		4.53	□□□□□ -1.68
NUD1	YOR373W	GNA1	P43577	159 aa	Predicted RBP	4.52	□□□□□ -1.69
NUD1	YOR373W	YLR224W	Q05947	369 aa		4.52	□□□□□ -1.69
NUD1	YOR373W	SCP1	Q08873	200 aa		4.52	□□□□□ -1.69
NUD1	YOR373W	MPD1	Q12404	318 aa	Known RBP	4.52	□□□□□ -1.69
NUD1	YOR373W	PET8	P38921	284 aa		4.52	□□□□□ -1.69
NUD1	YOR373W	PEX17	P40155	199 aa		4.52	□□□□□ -1.69
NUD1	YOR373W	YMR252C	Q04814	134 aa		4.52	□□□□□ -1.69
NUD1	YOR373W	BGL2	P15703	313 aa	Known RBP	4.51	□□□□□ -1.69
NUD1	YOR373W	APS1	P35181	156 aa		4.51	□□□□□ -1.69
NUD1	YOR373W	SEC16	P48415	2195 aa	Known RBP	4.51	□□□□□ -1.69
NUD1	YOR373W	YKL102C	P34249	101 aa		4.51	□□□□□ -1.69
NUD1	YOR373W	PRY2	P36110	329 aa		4.51	□□□□□ -1.69
NUD1	YOR373W	YPT31	P38555	223 aa	Known RBP	4.51	□□□□□ -1.69
NUD1	YOR373W	BUL1	P48524	976 aa		4.51	□□□□□ -1.69
NUD1	YOR373W	IRC25	Q07951	179 aa		4.51	□□□□□ -1.69
NUD1	YOR373W	YOR186W	Q08560	144 aa		4.51	□□□□□ -1.69
NUD1	YOR373W	DGK1	Q12382	290 aa		4.51	□□□□□ -1.69
NUD1	YOR373W	YMR105W-A	Q8TGS8	64 aa		4.51	□□□□□ -1.69
NUD1	YOR373W	UMP1	P38293	148 aa		4.5	□□□□□ -1.69
NUD1	YOR373W	HPA3	P39979	161 aa		4.5	□□□□□ -1.69
NUD1	YOR373W	ERP1	Q05359	219 aa	Known RBP	4.5	□□□□□ -1.69
NUD1	YOR373W	YOL160W	Q08321	113 aa		4.5	□□□□□ -1.69
NUD1	YOR373W	ATG40	Q99325	256 aa		4.5	□□□□□ -1.69
NUD1	YOR373W	PHO85	P17157	305 aa		4.5	□□□□□ -1.69
NUD1	YOR373W	IMP1	P28627	190 aa		4.5	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms