RNA–Protein interactions for RNA: YJL006C

CTK2, Transcript of Beta subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK2, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK2YJL006C YNL140CP53910 189 aa1.58□□□□□ -2.16
CTK2YJL006C AIM34Q03673 198 aa1.58□□□□□ -2.16
CTK2YJL006C YMR315WQ04869 349 aaKnown RBP1.58□□□□□ -2.16
CTK2YJL006C DGA1Q08650 418 aa1.58□□□□□ -2.16
CTK2YJL006C YPR014CQ6B0W2 109 aa1.58□□□□□ -2.16
CTK2YJL006C TY4B-JP47024 1803 aa1.58□□□□□ -2.16
CTK2YJL006C QCR2P07257 368 aa1.57□□□□□ -2.16
CTK2YJL006C RPS24AP0CX31 135 aaKnown RBP1.57□□□□□ -2.16
CTK2YJL006C RPS24BP0CX32 135 aaKnown RBP1.57□□□□□ -2.16
CTK2YJL006C ATP15P21306 62 aa1.57□□□□□ -2.16
CTK2YJL006C OCH1P31755 480 aa1.57□□□□□ -2.16
CTK2YJL006C TFC1P32367 649 aa1.57□□□□□ -2.16
CTK2YJL006C CLG1P35190 452 aa1.57□□□□□ -2.16
CTK2YJL006C YKR041WP36134 250 aa1.57□□□□□ -2.16
CTK2YJL006C NVJ1P38881 321 aa1.57□□□□□ -2.16
CTK2YJL006C YER076CP40049 302 aa1.57□□□□□ -2.16
CTK2YJL006C ARO8P53090 500 aaKnown RBP1.57□□□□□ -2.16
CTK2YJL006C HPT1Q04178 221 aaKnown RBP1.57□□□□□ -2.16
CTK2YJL006C DYN3Q04949 312 aa1.57□□□□□ -2.16
CTK2YJL006C SHH4Q06236 168 aa1.57□□□□□ -2.16
CTK2YJL006C BRX1Q08235 291 aaKnown RBP1.57□□□□□ -2.16
CTK2YJL006C URA2P07259 2214 aaKnown RBP1.56□□□□□ -2.16
CTK2YJL006C LAA1P39526 2014 aa1.56□□□□□ -2.16
CTK2YJL006C CMD1P06787 147 aaKnown RBP1.56□□□□□ -2.16
CTK2YJL006C CPA1P07258 411 aaKnown RBP1.56□□□□□ -2.16
CTK2YJL006C AHC2P25649 128 aa1.56□□□□□ -2.16
CTK2YJL006C ARO7P32178 256 aa1.56□□□□□ -2.16
CTK2YJL006C SHE2P36068 246 aaKnown RBP RIP-Chip data1.56□□□□□ -2.16not detected
CTK2YJL006C FMP23P38231 175 aa1.56□□□□□ -2.16
CTK2YJL006C OPY1P38271 328 aa1.56□□□□□ -2.16
CTK2YJL006C YBR285WP38354 144 aa1.56□□□□□ -2.16
CTK2YJL006C YER121WP40076 114 aa1.56□□□□□ -2.16
CTK2YJL006C YER134CP40081 178 aa1.56□□□□□ -2.16
CTK2YJL006C PLP1Q04004 230 aa1.56□□□□□ -2.16
CTK2YJL006C PEX11Q12462 236 aa1.56□□□□□ -2.16
CTK2YJL006C ODC2Q99297 307 aa1.56□□□□□ -2.16
CTK2YJL006C ATG40Q99325 256 aa1.56□□□□□ -2.16
CTK2YJL006C TY4B-HP0C2J7 1802 aa1.55□□□□□ -2.16
CTK2YJL006C PAN3P36102 679 aaPredicted RBP1.55□□□□□ -2.16
CTK2YJL006C AME1P38313 324 aa1.55□□□□□ -2.16
CTK2YJL006C SER2P42941 309 aa1.55□□□□□ -2.16
CTK2YJL006C ERJ5P43613 295 aaPredicted RBP1.55□□□□□ -2.16
CTK2YJL006C YJR111CP47148 283 aaKnown RBP1.55□□□□□ -2.16
CTK2YJL006C TDA4P47153 279 aa1.55□□□□□ -2.16
CTK2YJL006C PGA1P53896 198 aa1.55□□□□□ -2.16
CTK2YJL006C YDR274CP87283 123 aa1.55□□□□□ -2.16
CTK2YJL006C GPI17Q04080 534 aa1.55□□□□□ -2.16
CTK2YJL006C MPD1Q12404 318 aaKnown RBP1.55□□□□□ -2.16
CTK2YJL006C QCR8P08525 94 aa1.54□□□□□ -2.16
CTK2YJL006C YKL102CP34249 101 aa1.54□□□□□ -2.16
CTK2YJL006C TVP38P36164 337 aa1.54□□□□□ -2.16
CTK2YJL006C NSG1P38837 291 aa1.54□□□□□ -2.16
CTK2YJL006C MTW1P39731 289 aa1.54□□□□□ -2.16
CTK2YJL006C YEA4P40004 342 aa1.54□□□□□ -2.16
CTK2YJL006C KNH1P50112 268 aa1.54□□□□□ -2.16
CTK2YJL006C YLR053CQ12026 108 aa1.54□□□□□ -2.16
CTK2YJL006C YOR342CQ12182 319 aa1.54□□□□□ -2.16
CTK2YJL006C POL2P21951 2222 aaKnown RBP1.54□□□□□ -2.16
CTK2YJL006C YLR236CA0A023PZG4 107 aa1.53□□□□□ -2.16
CTK2YJL006C YAR023CD6VPM8 179 aa1.53□□□□□ -2.16
CTK2YJL006C UBC6P33296 250 aaPredicted RBP1.53□□□□□ -2.16
CTK2YJL006C KDX1P36005 433 aa1.53□□□□□ -2.16
CTK2YJL006C MAK3Q03503 176 aa1.53□□□□□ -2.16
CTK2YJL006C YOL014WQ08110 124 aa1.53□□□□□ -2.16
CTK2YJL006C YLR412C-AQ3E742 68 aa1.53□□□□□ -2.16
CTK2YJL006C YML100W-AQ8TGT0 57 aa1.53□□□□□ -2.16
CTK2YJL006C FIG1P38224 298 aa1.52□□□□□ -2.17
CTK2YJL006C TMA20P89886 181 aaPredicted RBP1.52□□□□□ -2.17
CTK2YJL006C YMR295CQ03559 197 aa1.52□□□□□ -2.17
CTK2YJL006C YDL180WQ12301 547 aa1.52□□□□□ -2.17
CTK2YJL006C BRR2P32639 2163 aaKnown RBP1.51□□□□□ -2.17
CTK2YJL006C KRE5P22023 1365 aa1.51□□□□□ -2.17
CTK2YJL006C RFC2P40348 353 aa1.51□□□□□ -2.17
CTK2YJL006C YFL019CP43576 117 aa1.51□□□□□ -2.17
CTK2YJL006C YFH7P43591 353 aa1.51□□□□□ -2.17
CTK2YJL006C GPI14P47088 403 aaKnown RBP1.51□□□□□ -2.17
CTK2YJL006C YGL235WP53071 178 aa1.51□□□□□ -2.17
CTK2YJL006C VPS71Q03433 280 aa1.51□□□□□ -2.17
CTK2YJL006C NSL1Q12143 216 aa1.51□□□□□ -2.17
CTK2YJL006C DGK1Q12382 290 aa1.51□□□□□ -2.17
CTK2YJL006C RDI1Q12434 202 aa1.51□□□□□ -2.17
CTK2YJL006C POR1P04840 283 aaKnown RBP1.5□□□□□ -2.17
CTK2YJL006C RPS28BP0C0X0 67 aaKnown RBP1.5□□□□□ -2.17
CTK2YJL006C SPO13P23624 291 aa1.5□□□□□ -2.17
CTK2YJL006C VMA22P38784 181 aa1.5□□□□□ -2.17
CTK2YJL006C XPT1P47165 209 aa1.5□□□□□ -2.17
CTK2YJL006C MPA43P53583 542 aaPredicted RBP1.5□□□□□ -2.17
CTK2YJL006C YDR476CQ03362 224 aa1.5□□□□□ -2.17
CTK2YJL006C CUE4Q04201 117 aaPredicted RBP1.5□□□□□ -2.17
CTK2YJL006C NAT3Q06504 195 aa1.5□□□□□ -2.17
CTK2YJL006C RPS28AQ3E7X9 67 aaPredicted RBP1.5□□□□□ -2.17
CTK2YJL006C DER1P38307 211 aa1.49□□□□□ -2.17
CTK2YJL006C EDC3P39998 551 aaKnown RBP1.49□□□□□ -2.17
CTK2YJL006C CUP9P41817 306 aa1.49□□□□□ -2.17
CTK2YJL006C TTI2P47168 421 aa1.49□□□□□ -2.17
CTK2YJL006C MPC3P53311 146 aa1.49□□□□□ -2.17
CTK2YJL006C HSK3P69852 69 aa1.49□□□□□ -2.17
CTK2YJL006C YMR099CQ03161 297 aaKnown RBP1.49□□□□□ -2.17
CTK2YJL006C SHH3Q04487 196 aa1.49□□□□□ -2.17
CTK2YJL006C RAD28Q12021 506 aa1.49□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 8.3 ms