RNA–Protein interactions for RNA: YCL055W

KAR4, Transcript of Transcription factor required for response to pheromones, yeastyeast

Gene KAR4, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KAR4YCL055W MRH4P53166 561 aa2.06□□□□□ -2.08
KAR4YCL055W DIG2Q03373 323 aaKnown RBP2.06□□□□□ -2.08
KAR4YCL055W YDR391CQ04170 232 aa2.06□□□□□ -2.08
KAR4YCL055W YLR283WQ05867 314 aa2.06□□□□□ -2.08
KAR4YCL055W NEJ1Q06148 342 aa2.06□□□□□ -2.08
KAR4YCL055W CSI2Q08054 341 aa2.06□□□□□ -2.08
KAR4YCL055W CSM4Q08955 156 aa2.06□□□□□ -2.08
KAR4YCL055W RTR2Q12378 196 aa2.06□□□□□ -2.08
KAR4YCL055W MPD1Q12404 318 aaKnown RBP2.06□□□□□ -2.08
KAR4YCL055W ATG31Q12421 196 aa2.06□□□□□ -2.08
KAR4YCL055W YGL041W-AP0C5N3 154 aa2.05□□□□□ -2.08
KAR4YCL055W RPL30P14120 105 aaKnown RBP2.05□□□□□ -2.08
KAR4YCL055W SEC22P22214 214 aa2.05□□□□□ -2.08
KAR4YCL055W VMA6P32366 345 aaKnown RBP2.05□□□□□ -2.08
KAR4YCL055W PAU2P32612 120 aa2.05□□□□□ -2.08
KAR4YCL055W YBL010CP32788 280 aa2.05□□□□□ -2.08
KAR4YCL055W YIR020CP40575 100 aa2.05□□□□□ -2.08
KAR4YCL055W ERJ5P43613 295 aaPredicted RBP2.05□□□□□ -2.08
KAR4YCL055W CCC1P47818 322 aa2.05□□□□□ -2.08
KAR4YCL055W NSA1P53136 463 aaPredicted RBP2.05□□□□□ -2.08
KAR4YCL055W YGR042WP53227 271 aa2.05□□□□□ -2.08
KAR4YCL055W NRK1P53915 240 aa2.05□□□□□ -2.08
KAR4YCL055W YDC1Q02896 317 aa2.05□□□□□ -2.08
KAR4YCL055W GPI17Q04080 534 aa2.05□□□□□ -2.08
KAR4YCL055W SPG4Q04438 115 aa2.05□□□□□ -2.08
KAR4YCL055W PAM18Q07914 168 aa2.05□□□□□ -2.08
KAR4YCL055W RFU1Q08003 200 aa2.05□□□□□ -2.08
KAR4YCL055W ATG41Q12048 136 aa2.05□□□□□ -2.08
KAR4YCL055W YCT1Q12235 531 aa2.05□□□□□ -2.08
KAR4YCL055W YOR097CQ12274 175 aaPredicted RBP2.05□□□□□ -2.08
KAR4YCL055W MED4Q12343 284 aa2.05□□□□□ -2.08
KAR4YCL055W COX9P07255 59 aa2.04□□□□□ -2.08
KAR4YCL055W VMA11P32842 164 aa2.04□□□□□ -2.08
KAR4YCL055W SHE2P36068 246 aaKnown RBP RIP-Chip data2.04□□□□□ -2.08not detected
KAR4YCL055W BFR1P38934 470 aaKnown RBP RIP-Chip data2.04□□□□□ -2.08not detected
KAR4YCL055W RMD6P39975 231 aa2.04□□□□□ -2.08
KAR4YCL055W RIO2P40160 425 aaKnown RBP2.04□□□□□ -2.08
KAR4YCL055W YAE1P47118 141 aaPredicted RBP2.04□□□□□ -2.08
KAR4YCL055W CWC23P52868 283 aaPredicted RBP2.04□□□□□ -2.08
KAR4YCL055W YNL046WP53956 172 aa2.04□□□□□ -2.08
KAR4YCL055W HHT1P61830 136 aa2.04□□□□□ -2.08
KAR4YCL055W TMA20P89886 181 aaPredicted RBP2.04□□□□□ -2.08
KAR4YCL055W YKR005CQ02203 525 aa2.04□□□□□ -2.08
KAR4YCL055W YDR248CQ03786 193 aa2.04□□□□□ -2.08
KAR4YCL055W YOL118CQ08259 102 aa2.04□□□□□ -2.08
KAR4YCL055W USB1Q12208 290 aaKnown RBP2.04□□□□□ -2.08
KAR4YCL055W SNU23Q12368 194 aaPredicted RBP2.04□□□□□ -2.08
KAR4YCL055W CCW14O13547 238 aa2.03□□□□□ -2.08
KAR4YCL055W AHC2P25649 128 aa2.03□□□□□ -2.08
KAR4YCL055W RPS5P26783 225 aaKnown RBP2.03□□□□□ -2.08
KAR4YCL055W TMA19P35691 167 aaKnown RBP2.03□□□□□ -2.08
KAR4YCL055W SFK1P35735 353 aa2.03□□□□□ -2.08
KAR4YCL055W RCN1P36054 211 aa2.03□□□□□ -2.08
KAR4YCL055W HTD2P38790 280 aaKnown RBP2.03□□□□□ -2.08
KAR4YCL055W OTU1P43558 301 aa2.03□□□□□ -2.08
KAR4YCL055W BXI1P48558 297 aa2.03□□□□□ -2.08
KAR4YCL055W SBH2P52871 88 aa2.03□□□□□ -2.08
KAR4YCL055W YGL204CP53089 101 aa2.03□□□□□ -2.08
KAR4YCL055W ERV29P53337 310 aa2.03□□□□□ -2.08
KAR4YCL055W MRPL50P53724 139 aa2.03□□□□□ -2.08
KAR4YCL055W YNR064CP53750 290 aa2.03□□□□□ -2.08
KAR4YCL055W SRL4Q03085 281 aa2.03□□□□□ -2.08
KAR4YCL055W YOR186WQ08560 144 aa2.03□□□□□ -2.08
KAR4YCL055W BBP1Q12365 385 aa2.03□□□□□ -2.08
KAR4YCL055W YOR192C-CQ3E736 78 aa2.03□□□□□ -2.08
KAR4YCL055W YMR105W-AQ8TGS8 64 aa2.03□□□□□ -2.08
KAR4YCL055W CDC28P00546 298 aaKnown RBP2.02□□□□□ -2.09
KAR4YCL055W MATALPHA1P0CY06 175 aa2.02□□□□□ -2.09
KAR4YCL055W HMLALPHA1P0CY07 175 aa2.02□□□□□ -2.09
KAR4YCL055W PEX4P29340 183 aa2.02□□□□□ -2.09
KAR4YCL055W SNC2P33328 115 aa2.02□□□□□ -2.09
KAR4YCL055W UMP1P38293 148 aa2.02□□□□□ -2.09
KAR4YCL055W CUE1P38428 203 aa2.02□□□□□ -2.09
KAR4YCL055W CAT5P41735 233 aa2.02□□□□□ -2.09
KAR4YCL055W OST2P46964 130 aa2.02□□□□□ -2.09
KAR4YCL055W GPI14P47088 403 aaKnown RBP2.02□□□□□ -2.09
KAR4YCL055W PRM15Q03262 622 aa2.02□□□□□ -2.09
KAR4YCL055W RRP17Q04031 235 aaPredicted RBP2.02□□□□□ -2.09
KAR4YCL055W RIM9Q04734 239 aa2.02□□□□□ -2.09
KAR4YCL055W SUS1Q6WNK7 96 aa2.02□□□□□ -2.09
KAR4YCL055W ODC2Q99297 307 aa2.02□□□□□ -2.09
KAR4YCL055W RPL25P04456 142 aaKnown RBP2.01□□□□□ -2.09
KAR4YCL055W MRPS28P21771 286 aa2.01□□□□□ -2.09
KAR4YCL055W OCH1P31755 480 aa2.01□□□□□ -2.09
KAR4YCL055W MSA2P36157 363 aa2.01□□□□□ -2.09
KAR4YCL055W MRPL49P40858 161 aaPredicted RBP2.01□□□□□ -2.09
KAR4YCL055W RBL2P48606 106 aaKnown RBP2.01□□□□□ -2.09
KAR4YCL055W GEP7P53171 287 aa2.01□□□□□ -2.09
KAR4YCL055W YPL067CQ02754 198 aa2.01□□□□□ -2.09
KAR4YCL055W MSA1Q08471 629 aa2.01□□□□□ -2.09
KAR4YCL055W ATG40Q99325 256 aa2.01□□□□□ -2.09
KAR4YCL055W QCR7P00128 127 aa2□□□□□ -2.09
KAR4YCL055W SEN2P16658 377 aa2□□□□□ -2.09
KAR4YCL055W ATG22P25568 528 aa2□□□□□ -2.09
KAR4YCL055W COS8P38723 381 aa2□□□□□ -2.09
KAR4YCL055W IPI1P38803 334 aaPredicted RBP2□□□□□ -2.09
KAR4YCL055W HPA3P39979 161 aa2□□□□□ -2.09
KAR4YCL055W XPT1P47165 209 aa2□□□□□ -2.09
KAR4YCL055W HNT1Q04344 158 aaKnown RBP2□□□□□ -2.09
KAR4YCL055W UPS1Q05776 175 aa2□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 46.8 ms