RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W YDL180WQ12301 547 aa1.55□□□□□ -2.16
PEP12YOR036W EFG1Q3E705 233 aaKnown RBP1.55□□□□□ -2.16
PEP12YOR036W PBI2P0CT04 75 aaKnown RBP1.54□□□□□ -2.16
PEP12YOR036W TIR1P10863 254 aa1.54□□□□□ -2.16
PEP12YOR036W YNL200CP40165 246 aaKnown RBP1.54□□□□□ -2.16
PEP12YOR036W XPT1P47165 209 aa1.54□□□□□ -2.16
PEP12YOR036W TTI2P47168 421 aa1.54□□□□□ -2.16
PEP12YOR036W SAY1P53324 424 aa1.54□□□□□ -2.16
PEP12YOR036W YMR295CQ03559 197 aa1.54□□□□□ -2.16
PEP12YOR036W CUE4Q04201 117 aaPredicted RBP1.54□□□□□ -2.16
PEP12YOR036W MET5P47169 1442 aa1.54□□□□□ -2.16
PEP12YOR036W SEC11P15367 167 aa1.53□□□□□ -2.16
PEP12YOR036W IDP1P21954 428 aaKnown RBP1.53□□□□□ -2.16
PEP12YOR036W UBC8P28263 218 aa1.53□□□□□ -2.16
PEP12YOR036W NUF2P33895 451 aa1.53□□□□□ -2.16
PEP12YOR036W UPS2P35200 230 aa1.53□□□□□ -2.16
PEP12YOR036W TMA19P35691 167 aaKnown RBP1.53□□□□□ -2.16
PEP12YOR036W SLM6P38343 150 aa1.53□□□□□ -2.16
PEP12YOR036W SPC25P40014 221 aa1.53□□□□□ -2.16
PEP12YOR036W ERJ5P43613 295 aaPredicted RBP1.53□□□□□ -2.16
PEP12YOR036W SOL1P50278 321 aa1.53□□□□□ -2.16
PEP12YOR036W YGL204CP53089 101 aa1.53□□□□□ -2.16
PEP12YOR036W YGR042WP53227 271 aa1.53□□□□□ -2.16
PEP12YOR036W PKR1Q03880 122 aaKnown RBP1.53□□□□□ -2.16
PEP12YOR036W SHH3Q04487 196 aa1.53□□□□□ -2.16
PEP12YOR036W IRC23Q08416 157 aa1.53□□□□□ -2.16
PEP12YOR036W YPR202WQ08993 238 aa1.53□□□□□ -2.16
PEP12YOR036W PEX34P25584 144 aa1.52□□□□□ -2.17
PEP12YOR036W CYC2P38909 366 aa1.52□□□□□ -2.17
PEP12YOR036W NSA2P40078 261 aaKnown RBP1.52□□□□□ -2.17
PEP12YOR036W YER135CP40082 130 aa1.52□□□□□ -2.17
PEP12YOR036W CUP9P41817 306 aa1.52□□□□□ -2.17
PEP12YOR036W RAD28Q12021 506 aa1.52□□□□□ -2.17
PEP12YOR036W DAS2Q12084 232 aa1.52□□□□□ -2.17
PEP12YOR036W ATP20Q12233 115 aa1.52□□□□□ -2.17
PEP12YOR036W UBI4P0CG63 381 aaKnown RBP1.51□□□□□ -2.17
PEP12YOR036W YKR045CP36138 183 aa1.51□□□□□ -2.17
PEP12YOR036W PAM17P36147 197 aa1.51□□□□□ -2.17
PEP12YOR036W CSH1P38287 376 aa1.51□□□□□ -2.17
PEP12YOR036W FYV4P38783 130 aaPredicted RBP1.51□□□□□ -2.17
PEP12YOR036W YNL033WP53964 284 aa1.51□□□□□ -2.17
PEP12YOR036W HHT1P61830 136 aa1.51□□□□□ -2.17
PEP12YOR036W DAD4P69851 72 aa1.51□□□□□ -2.17
PEP12YOR036W RAV2Q03956 351 aa1.51□□□□□ -2.17
PEP12YOR036W THI74Q04083 370 aa1.51□□□□□ -2.17
PEP12YOR036W YMR253CQ04835 414 aa1.51□□□□□ -2.17
PEP12YOR036W RNH202Q05635 350 aa1.51□□□□□ -2.17
PEP12YOR036W YLR046CQ12253 270 aa1.51□□□□□ -2.17
PEP12YOR036W YOR1P53049 1477 aa1.5□□□□□ -2.17
PEP12YOR036W RPL2AP0CX45 254 aaKnown RBP1.5□□□□□ -2.17
PEP12YOR036W RPL2BP0CX46 254 aaKnown RBP1.5□□□□□ -2.17
PEP12YOR036W NSP1P14907 823 aaKnown RBP1.5□□□□□ -2.17
PEP12YOR036W IPI1P38803 334 aaPredicted RBP1.5□□□□□ -2.17
PEP12YOR036W TVP23P38962 199 aa1.5□□□□□ -2.17
PEP12YOR036W APQ12P40532 138 aa1.5□□□□□ -2.17
PEP12YOR036W YGR201CP42936 225 aa1.5□□□□□ -2.17
PEP12YOR036W TIM13P53299 105 aa1.5□□□□□ -2.17
PEP12YOR036W LSM3P57743 89 aaKnown RBP1.5□□□□□ -2.17
PEP12YOR036W DIG2Q03373 323 aaKnown RBP1.5□□□□□ -2.17
PEP12YOR036W GAL83Q04739 417 aa1.5□□□□□ -2.17
PEP12YOR036W YLR162WQ06235 118 aa1.5□□□□□ -2.17
PEP12YOR036W CPR5P35176 225 aa1.49□□□□□ -2.17
PEP12YOR036W RRT1P38192 103 aa1.49□□□□□ -2.17
PEP12YOR036W YBR219CP38317 127 aa1.49□□□□□ -2.17
PEP12YOR036W YPL073CP40323 161 aa1.49□□□□□ -2.17
PEP12YOR036W DLS1P40366 167 aa1.49□□□□□ -2.17
PEP12YOR036W YJR015WP47090 510 aa1.49□□□□□ -2.17
PEP12YOR036W ORM1P53224 222 aa1.49□□□□□ -2.17
PEP12YOR036W YPR174CQ06616 221 aaPredicted RBP1.49□□□□□ -2.17
PEP12YOR036W PRP11Q07350 266 aaPredicted RBP1.49□□□□□ -2.17
PEP12YOR036W FYV12Q08559 129 aa1.49□□□□□ -2.17
PEP12YOR036W YOR214CQ12282 236 aa1.49□□□□□ -2.17
PEP12YOR036W FLO9P39712 1322 aa1.48□□□□□ -2.17
PEP12YOR036W RPL30P14120 105 aaKnown RBP1.48□□□□□ -2.17
PEP12YOR036W STP22P25604 385 aa1.48□□□□□ -2.17
PEP12YOR036W SFK1P35735 353 aa1.48□□□□□ -2.17
PEP12YOR036W YHL018WP38744 120 aaPredicted RBP1.48□□□□□ -2.17
PEP12YOR036W RBL2P48606 106 aaKnown RBP1.48□□□□□ -2.17
PEP12YOR036W SBH1P52870 82 aa1.48□□□□□ -2.17
PEP12YOR036W THG1P53215 237 aaKnown RBP1.48□□□□□ -2.17
PEP12YOR036W YKR005CQ02203 525 aa1.48□□□□□ -2.17
PEP12YOR036W YPR013CQ12145 317 aa1.48□□□□□ -2.17
PEP12YOR036W TAF2P23255 1407 aa1.48□□□□□ -2.17
PEP12YOR036W MDM35O60200 86 aa1.47□□□□□ -2.17
PEP12YOR036W YGL010WP25338 174 aa1.47□□□□□ -2.17
PEP12YOR036W HSP30P25619 332 aa1.47□□□□□ -2.17
PEP12YOR036W YBR220CP38318 560 aa1.47□□□□□ -2.17
PEP12YOR036W RPL13BP40212 199 aaKnown RBP1.47□□□□□ -2.17
PEP12YOR036W GLR1P41921 483 aaKnown RBP1.47□□□□□ -2.17
PEP12YOR036W CCC1P47818 322 aa1.47□□□□□ -2.17
PEP12YOR036W VPS28Q02767 242 aa1.47□□□□□ -2.17
PEP12YOR036W CSI2Q08054 341 aa1.47□□□□□ -2.17
PEP12YOR036W YOR015WQ12169 119 aa1.47□□□□□ -2.17
PEP12YOR036W PST2Q12335 198 aaKnown RBP1.47□□□□□ -2.17
PEP12YOR036W RPL13AQ12690 199 aaPredicted RBP1.47□□□□□ -2.17
PEP12YOR036W YLR361C-AQ3E795 98 aa1.47□□□□□ -2.17
PEP12YOR036W YOR381W-AQ3E804 55 aa1.47□□□□□ -2.17
PEP12YOR036W RIB3Q99258 208 aa1.47□□□□□ -2.17
PEP12YOR036W COX8P04039 78 aa1.46□□□□□ -2.18
PEP12YOR036W ATP5P09457 212 aa1.46□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 85.7 ms