RNA–Protein interactions for RNA: YNL049C

SFB2, Transcript of Component of the Sec23p-Sfb2p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB2, Length 2,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB2YNL049C SUA5P32579 426 aa1.25□□□□□ -2.21
SFB2YNL049C MED8P38304 223 aa1.25□□□□□ -2.21
SFB2YNL049C TAD2P47058 250 aa1.25□□□□□ -2.21
SFB2YNL049C YGR042WP53227 271 aa1.25□□□□□ -2.21
SFB2YNL049C COG5P53951 403 aa1.25□□□□□ -2.21
SFB2YNL049C SYC1Q08553 188 aaPredicted RBP1.25□□□□□ -2.21
SFB2YNL049C VIK1Q12045 647 aa1.25□□□□□ -2.21
SFB2YNL049C SPC3Q12133 184 aa1.25□□□□□ -2.21
SFB2YNL049C MSH5Q12175 901 aa1.25□□□□□ -2.21
SFB2YNL049C TIR4Q12218 487 aaPredicted RBP1.25□□□□□ -2.21
SFB2YNL049C URA2P07259 2214 aaKnown RBP1.25□□□□□ -2.21
SFB2YNL049C THP2O13539 261 aaKnown RBP1.24□□□□□ -2.21
SFB2YNL049C RPL39P04650 51 aa1.24□□□□□ -2.21
SFB2YNL049C MATALPHA1P0CY06 175 aa1.24□□□□□ -2.21
SFB2YNL049C HMLALPHA1P0CY07 175 aa1.24□□□□□ -2.21
SFB2YNL049C MRP1P10662 321 aaKnown RBP1.24□□□□□ -2.21
SFB2YNL049C ATG22P25568 528 aa1.24□□□□□ -2.21
SFB2YNL049C OAC1P32332 324 aa1.24□□□□□ -2.21
SFB2YNL049C IPT1P38954 527 aa1.24□□□□□ -2.21
SFB2YNL049C FMC1P40491 155 aa1.24□□□□□ -2.21
SFB2YNL049C TTI2P47168 421 aa1.24□□□□□ -2.21
SFB2YNL049C MRH4P53166 561 aa1.24□□□□□ -2.21
SFB2YNL049C YML018CQ03730 393 aa1.24□□□□□ -2.21
SFB2YNL049C CTR3Q06686 241 aa1.24□□□□□ -2.21
SFB2YNL049C ARG80P07249 177 aa1.24□□□□□ -2.21
SFB2YNL049C UTP30P36144 274 aaKnown RBP1.24□□□□□ -2.21
SFB2YNL049C YNL200CP40165 246 aaKnown RBP1.24□□□□□ -2.21
SFB2YNL049C YGL204CP53089 101 aa1.24□□□□□ -2.21
SFB2YNL049C COX12Q01519 83 aa1.24□□□□□ -2.21
SFB2YNL049C ECM19Q06011 112 aa1.24□□□□□ -2.21
SFB2YNL049C ATG39Q06159 398 aa1.24□□□□□ -2.21
SFB2YNL049C PAM18Q07914 168 aa1.24□□□□□ -2.21
SFB2YNL049C VAM10Q08474 114 aa1.24□□□□□ -2.21
SFB2YNL049C YPR063CQ12160 140 aa1.24□□□□□ -2.21
SFB2YNL049C DFM1Q12743 341 aaKnown RBP1.24□□□□□ -2.21
SFB2YNL049C YAL063C-AQ3E791 96 aa1.24□□□□□ -2.21
SFB2YNL049C YGL041W-AP0C5N3 154 aa1.23□□□□□ -2.21
SFB2YNL049C PET54P10834 293 aa1.23□□□□□ -2.21
SFB2YNL049C YCR016WP25617 290 aaKnown RBP1.23□□□□□ -2.21
SFB2YNL049C PPA2P28239 310 aa1.23□□□□□ -2.21
SFB2YNL049C ARO7P32178 256 aa1.23□□□□□ -2.21
SFB2YNL049C LHP1P33399 275 aaKnown RBP1.23□□□□□ -2.21
SFB2YNL049C SRL3P36167 246 aa1.23□□□□□ -2.21
SFB2YNL049C YER085CP40058 173 aa1.23□□□□□ -2.21
SFB2YNL049C COX15P40086 486 aa1.23□□□□□ -2.21
SFB2YNL049C MPM1P40364 252 aa1.23□□□□□ -2.21
SFB2YNL049C FLX1P40464 311 aa1.23□□□□□ -2.21
SFB2YNL049C FYV6P53913 173 aa1.23□□□□□ -2.21
SFB2YNL049C SME1Q12330 94 aaPredicted RBP1.23□□□□□ -2.21
SFB2YNL049C TRM10Q12400 293 aa1.23□□□□□ -2.21
SFB2YNL049C TPI1P00942 248 aaKnown RBP1.23□□□□□ -2.21
SFB2YNL049C COX10P21592 462 aa1.23□□□□□ -2.21
SFB2YNL049C VPH2P32341 215 aa1.23□□□□□ -2.21
SFB2YNL049C QRI5P32344 111 aa1.23□□□□□ -2.21
SFB2YNL049C FPR2P32472 135 aa1.23□□□□□ -2.21
SFB2YNL049C TRS20P38334 175 aa1.23□□□□□ -2.21
SFB2YNL049C RTC3P38804 111 aaPredicted RBP1.23□□□□□ -2.21
SFB2YNL049C SMB1P40018 196 aaKnown RBP1.23□□□□□ -2.21
SFB2YNL049C FAR8Q05040 523 aa1.23□□□□□ -2.21
SFB2YNL049C YLR042CQ07990 161 aa1.23□□□□□ -2.21
SFB2YNL049C AGC1Q12482 902 aa1.23□□□□□ -2.21
SFB2YNL049C SNF8Q12483 233 aa1.23□□□□□ -2.21
SFB2YNL049C RIB3Q99258 208 aa1.23□□□□□ -2.21
SFB2YNL049C RFA3P26755 122 aaKnown RBP1.22□□□□□ -2.21
SFB2YNL049C IMP1P28627 190 aa1.22□□□□□ -2.21
SFB2YNL049C MRPL3P36516 390 aa1.22□□□□□ -2.21
SFB2YNL049C CTR2P38865 189 aa1.22□□□□□ -2.21
SFB2YNL049C YGL159WP53110 370 aa1.22□□□□□ -2.21
SFB2YNL049C ALG13P53178 202 aa1.22□□□□□ -2.21
SFB2YNL049C NQM1P53228 333 aaPredicted RBP1.22□□□□□ -2.21
SFB2YNL049C FMP41P53889 259 aaKnown RBP1.22□□□□□ -2.21
SFB2YNL049C AAH1P53909 347 aa1.22□□□□□ -2.21
SFB2YNL049C YNL095CP53932 642 aa1.22□□□□□ -2.21
SFB2YNL049C NUP49Q02199 472 aa1.22□□□□□ -2.21
SFB2YNL049C CTF19Q02732 369 aa1.22□□□□□ -2.21
SFB2YNL049C MRX8Q05473 314 aa1.22□□□□□ -2.21
SFB2YNL049C HEM25Q07534 307 aa1.22□□□□□ -2.21
SFB2YNL049C RFM1Q12192 310 aa1.22□□□□□ -2.21
SFB2YNL049C PEX3P28795 441 aa1.22□□□□□ -2.21
SFB2YNL049C DOA4P32571 926 aa1.22□□□□□ -2.21
SFB2YNL049C AIM29P36154 155 aa1.22□□□□□ -2.21
SFB2YNL049C PIR5P46999 287 aa1.22□□□□□ -2.21
SFB2YNL049C TDA4P47153 279 aa1.22□□□□□ -2.21
SFB2YNL049C YGL118CP53132 145 aa1.22□□□□□ -2.21
SFB2YNL049C HRD1Q08109 551 aa1.22□□□□□ -2.21
SFB2YNL049C SOD1P00445 154 aaKnown RBP1.21□□□□□ -2.22
SFB2YNL049C POP8P38208 133 aa1.21□□□□□ -2.22
SFB2YNL049C BFR1P38934 470 aaKnown RBP RIP-Chip data1.21□□□□□ -2.22not detected
SFB2YNL049C GAT4P40569 121 aa1.21□□□□□ -2.22
SFB2YNL049C MRPL49P40858 161 aaPredicted RBP1.21□□□□□ -2.22
SFB2YNL049C MSS2P40990 351 aa1.21□□□□□ -2.22
SFB2YNL049C OTU1P43558 301 aa1.21□□□□□ -2.22
SFB2YNL049C SSU72P53538 206 aaPredicted RBP1.21□□□□□ -2.22
SFB2YNL049C MRPL50P53724 139 aa1.21□□□□□ -2.22
SFB2YNL049C SNO1Q03144 224 aa1.21□□□□□ -2.22
SFB2YNL049C ELP6Q04868 273 aa1.21□□□□□ -2.22
SFB2YNL049C YPD1Q07688 167 aa1.21□□□□□ -2.22
SFB2YNL049C YPL119C-AQ3E751 87 aa1.21□□□□□ -2.22
SFB2YNL049C YMR316C-AI2HB70 103 aa1.21□□□□□ -2.22
SFB2YNL049C STF2P16965 84 aa1.21□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 126.7 ms