RNA–Protein interactions for RNA: YMR308C

PSE1, Transcript of Karyopherin/importin that interacts with the nuclear pore complex, yeastyeast

Gene PSE1, Length 3,270 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PSE1YMR308C YMC2P38087 329 aa4.29□□□□□ -1.72
PSE1YMR308C YNL198CP40166 100 aa4.29□□□□□ -1.72
PSE1YMR308C YFR045WP43617 309 aa4.29□□□□□ -1.72
PSE1YMR308C PIN3Q06449 215 aa4.29□□□□□ -1.72
PSE1YMR308C PBP4Q07362 185 aaKnown RBP4.29□□□□□ -1.72
PSE1YMR308C IES4Q08561 116 aa4.29□□□□□ -1.72
PSE1YMR308C RNH203Q12338 110 aa4.29□□□□□ -1.72
PSE1YMR308C YPR064WQ12492 139 aa4.29□□□□□ -1.72
PSE1YMR308C ARN2P38724 620 aa4.29□□□□□ -1.72
PSE1YMR308C RPB11P38902 120 aa4.29□□□□□ -1.72
PSE1YMR308C YAR029WP39549 74 aa4.29□□□□□ -1.72
PSE1YMR308C SWM2P40342 146 aa4.29□□□□□ -1.72
PSE1YMR308C BAT2P47176 376 aaKnown RBP4.29□□□□□ -1.72
PSE1YMR308C UBP8P50102 471 aa4.29□□□□□ -1.72
PSE1YMR308C UTP15Q04305 513 aaKnown RBP4.29□□□□□ -1.72
PSE1YMR308C YML053CQ04978 212 aa4.29□□□□□ -1.72
PSE1YMR308C NMA1Q06178 401 aaKnown RBP4.29□□□□□ -1.72
PSE1YMR308C FIT3Q08907 204 aa4.29□□□□□ -1.72
PSE1YMR308C DOP1Q03921 1698 aa4.29□□□□□ -1.72
PSE1YMR308C PBI2P0CT04 75 aaKnown RBP4.29□□□□□ -1.72
PSE1YMR308C ERG24P32462 438 aaKnown RBP4.29□□□□□ -1.72
PSE1YMR308C YDR209CQ03480 137 aa4.29□□□□□ -1.72
PSE1YMR308C UPS1Q05776 175 aa4.29□□□□□ -1.72
PSE1YMR308C SLM3Q12093 417 aa4.29□□□□□ -1.72
PSE1YMR308C FCY1Q12178 158 aa4.29□□□□□ -1.72
PSE1YMR308C BOL1Q3E793 110 aa4.29□□□□□ -1.72
PSE1YMR308C YOR093CQ12275 1648 aa4.29□□□□□ -1.72
PSE1YMR308C RPL14AP36105 138 aaKnown RBP4.28□□□□□ -1.72
PSE1YMR308C MRPS9P38120 278 aa4.28□□□□□ -1.72
PSE1YMR308C CSH1P38287 376 aa4.28□□□□□ -1.72
PSE1YMR308C MHF1Q3E835 90 aa4.28□□□□□ -1.72
PSE1YMR308C COX5AP00424 153 aa4.28□□□□□ -1.72
PSE1YMR308C MCR1P36060 302 aaKnown RBP4.28□□□□□ -1.72
PSE1YMR308C YIL029CP40538 142 aa4.28□□□□□ -1.72
PSE1YMR308C RPS10AQ08745 105 aaPredicted RBP4.28□□□□□ -1.72
PSE1YMR308C SWM1Q12379 170 aa4.28□□□□□ -1.72
PSE1YMR308C KTI11Q3E840 82 aa4.28□□□□□ -1.72
PSE1YMR308C TAD3Q9URQ3 322 aa4.28□□□□□ -1.72
PSE1YMR308C RPL7AP05737 244 aaKnown RBP4.27□□□□□ -1.73
PSE1YMR308C YHR140WP38842 239 aa4.27□□□□□ -1.73
PSE1YMR308C YFR054CP43622 192 aa4.27□□□□□ -1.73
PSE1YMR308C Q0010Q9ZZX9 128 aa4.27□□□□□ -1.73
PSE1YMR308C YHR138CP38841 114 aaPredicted RBP4.27□□□□□ -1.73
PSE1YMR308C ATP23P53722 227 aa4.27□□□□□ -1.73
PSE1YMR308C LSM3P57743 89 aaKnown RBP4.27□□□□□ -1.73
PSE1YMR308C YPL062WQ02781 134 aa4.27□□□□□ -1.73
PSE1YMR308C MCA1Q08601 432 aa4.27□□□□□ -1.73
PSE1YMR308C JID1Q12350 301 aa4.27□□□□□ -1.73
PSE1YMR308C GAS1P22146 559 aaKnown RBP4.27□□□□□ -1.73
PSE1YMR308C YMC1P32331 307 aa4.27□□□□□ -1.73
PSE1YMR308C YIL054WP40524 105 aa4.26□□□□□ -1.73
PSE1YMR308C RIM8P53179 542 aa4.26□□□□□ -1.73
PSE1YMR308C ATG12P38316 186 aa4.26□□□□□ -1.73
PSE1YMR308C YPL039WQ03080 316 aa4.26□□□□□ -1.73
PSE1YMR308C PRS5Q12265 496 aaKnown RBP4.26□□□□□ -1.73
PSE1YMR308C YOR097CQ12274 175 aaPredicted RBP4.26□□□□□ -1.73
PSE1YMR308C ALK2P32789 676 aaPredicted RBP4.26□□□□□ -1.73
PSE1YMR308C TTI2P47168 421 aa4.26□□□□□ -1.73
PSE1YMR308C LSM7P53905 115 aaKnown RBP4.26□□□□□ -1.73
PSE1YMR308C YPR098CQ06089 161 aa4.26□□□□□ -1.73
PSE1YMR308C TIR4Q12218 487 aaPredicted RBP4.26□□□□□ -1.73
PSE1YMR308C POC4Q12245 148 aaPredicted RBP4.26□□□□□ -1.73
PSE1YMR308C RPL30P14120 105 aaKnown RBP4.25□□□□□ -1.73
PSE1YMR308C MKK1P32490 508 aa4.25□□□□□ -1.73
PSE1YMR308C SWD2P36104 329 aaPredicted RBP4.25□□□□□ -1.73
PSE1YMR308C PAM17P36147 197 aa4.25□□□□□ -1.73
PSE1YMR308C HXT10P43581 546 aa4.25□□□□□ -1.73
PSE1YMR308C ATG27P46989 271 aa4.25□□□□□ -1.73
PSE1YMR308C KNH1P50112 268 aa4.25□□□□□ -1.73
PSE1YMR308C GEP7P53171 287 aa4.25□□□□□ -1.73
PSE1YMR308C YMR252CQ04814 134 aa4.25□□□□□ -1.73
PSE1YMR308C KEI1Q06346 221 aa4.25□□□□□ -1.73
PSE1YMR308C YLR412C-AQ3E742 68 aa4.25□□□□□ -1.73
PSE1YMR308C ECM12O13529 151 aa4.25□□□□□ -1.73
PSE1YMR308C MRS3P10566 314 aa4.25□□□□□ -1.73
PSE1YMR308C YRA2P36036 203 aaKnown RBP RIP-Chip data4.25□□□□□ -1.73not detected
PSE1YMR308C BCK1Q01389 1478 aa4.24□□□□□ -1.73
PSE1YMR308C SRP21P32342 167 aa4.24□□□□□ -1.73
PSE1YMR308C HNT2P49775 206 aa4.24□□□□□ -1.73
PSE1YMR308C CPD1P53314 239 aa4.24□□□□□ -1.73
PSE1YMR308C YNL033WP53964 284 aa4.24□□□□□ -1.73
PSE1YMR308C YNL019CP53975 284 aa4.24□□□□□ -1.73
PSE1YMR308C YDL009CQ12210 107 aa4.24□□□□□ -1.73
PSE1YMR308C CYC1P00044 109 aaPredicted RBP4.24□□□□□ -1.73
PSE1YMR308C RPL11AP0C0W9 174 aaKnown RBP4.24□□□□□ -1.73
PSE1YMR308C YBR144CP34215 104 aa4.24□□□□□ -1.73
PSE1YMR308C MSL1P40567 111 aaPredicted RBP4.24□□□□□ -1.73
PSE1YMR308C TDA7P53882 636 aaPredicted RBP4.24□□□□□ -1.73
PSE1YMR308C RPL11BQ3E757 174 aaPredicted RBP4.24□□□□□ -1.73
PSE1YMR308C INM1P38710 295 aa4.24□□□□□ -1.73
PSE1YMR308C EMC4P53073 190 aa4.24□□□□□ -1.73
PSE1YMR308C NUP100Q02629 959 aa4.24□□□□□ -1.73
PSE1YMR308C SHH4Q06236 168 aa4.24□□□□□ -1.73
PSE1YMR308C YDL157CQ12082 118 aa4.24□□□□□ -1.73
PSE1YMR308C NCE102Q12207 173 aaRIP-Chip data4.24□□□□□ -1.73not detected
PSE1YMR308C SME1Q12330 94 aaPredicted RBP4.24□□□□□ -1.73
PSE1YMR308C RAD6P06104 172 aa4.23□□□□□ -1.73
PSE1YMR308C MSI1P13712 422 aa4.23□□□□□ -1.73
PSE1YMR308C TFS1P14306 219 aa4.23□□□□□ -1.73
PSE1YMR308C YKL102CP34249 101 aa4.23□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 78.4 ms