RNA–Protein interactions for RNA: YMR123W

PKR1, Transcript of V-ATPase assembly factor, yeast

Gene PKR1, Length 369 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PKR1	YMR123W	RIO1	Q12196	484 aa	Known RBP	1.11	□□□□□ -2.23
PKR1	YMR123W	YDL180W	Q12301	547 aa		1.11	□□□□□ -2.23
PKR1	YMR123W	HTL1	Q9URQ5	78 aa		1.11	□□□□□ -2.23
PKR1	YMR123W	FAS1	P07149	2051 aa	Known RBP	1.11	□□□□□ -2.23
PKR1	YMR123W	CYR1	P08678	2026 aa	Known RBP	1.1	□□□□□ -2.23
PKR1	YMR123W	DDI2	P0CH63	225 aa		1.1	□□□□□ -2.23
PKR1	YMR123W	DDI3	P0CH64	225 aa		1.1	□□□□□ -2.23
PKR1	YMR123W	DBF2	P22204	572 aa		1.1	□□□□□ -2.23
PKR1	YMR123W	MRPL25	P23369	157 aa		1.1	□□□□□ -2.23
PKR1	YMR123W	PBN1	P25580	416 aa		1.1	□□□□□ -2.23
PKR1	YMR123W	OAC1	P32332	324 aa		1.1	□□□□□ -2.23
PKR1	YMR123W	YKR045C	P36138	183 aa		1.1	□□□□□ -2.23
PKR1	YMR123W	RIB1	P38066	345 aa		1.1	□□□□□ -2.23
PKR1	YMR123W	RTC3	P38804	111 aa	Predicted RBP	1.1	□□□□□ -2.23
PKR1	YMR123W	NSG1	P38837	291 aa		1.1	□□□□□ -2.23
PKR1	YMR123W	YER121W	P40076	114 aa		1.1	□□□□□ -2.23
PKR1	YMR123W	ADO1	P47143	340 aa	Known RBP	1.1	□□□□□ -2.23
PKR1	YMR123W	ALG13	P53178	202 aa		1.1	□□□□□ -2.23
PKR1	YMR123W	SED1	Q01589	338 aa		1.1	□□□□□ -2.23
PKR1	YMR123W	KRE28	Q04431	385 aa		1.1	□□□□□ -2.23
PKR1	YMR123W	RNH1	Q04740	348 aa		1.1	□□□□□ -2.23
PKR1	YMR123W	NEJ1	Q06148	342 aa		1.1	□□□□□ -2.23
PKR1	YMR123W	ARR2	Q06597	130 aa		1.1	□□□□□ -2.23
PKR1	YMR123W	USB1	Q12208	290 aa	Known RBP	1.1	□□□□□ -2.23
PKR1	YMR123W	CDC8	P00572	216 aa		1.09	□□□□□ -2.23
PKR1	YMR123W	RPL9A	P05738	191 aa	Known RBP	1.09	□□□□□ -2.23
PKR1	YMR123W	RPL35A	P0CX84	120 aa	Known RBP	1.09	□□□□□ -2.23
PKR1	YMR123W	RPL35B	P0CX85	120 aa	Known RBP	1.09	□□□□□ -2.23
PKR1	YMR123W	KSS1	P14681	368 aa		1.09	□□□□□ -2.23
PKR1	YMR123W	FCY2	P17064	533 aa		1.09	□□□□□ -2.23
PKR1	YMR123W	YGL010W	P25338	174 aa		1.09	□□□□□ -2.23
PKR1	YMR123W	YKL102C	P34249	101 aa		1.09	□□□□□ -2.23
PKR1	YMR123W	PTC1	P35182	281 aa		1.09	□□□□□ -2.23
PKR1	YMR123W	CAF4	P36130	643 aa		1.09	□□□□□ -2.23
PKR1	YMR123W	YAR068W	P39564	161 aa		1.09	□□□□□ -2.23
PKR1	YMR123W	YER085C	P40058	173 aa		1.09	□□□□□ -2.23
PKR1	YMR123W	RFC4	P40339	323 aa	Known RBP	1.09	□□□□□ -2.23
PKR1	YMR123W	YKE4	P40544	346 aa		1.09	□□□□□ -2.23
PKR1	YMR123W	PAC10	P48363	199 aa		1.09	□□□□□ -2.23
PKR1	YMR123W	RPL9B	P51401	191 aa	Known RBP	1.09	□□□□□ -2.23
PKR1	YMR123W	RMR1	P53060	241 aa		1.09	□□□□□ -2.23
PKR1	YMR123W	NOP19	P53317	196 aa	Predicted RBP	1.09	□□□□□ -2.23
PKR1	YMR123W	RCF2	P53721	224 aa		1.09	□□□□□ -2.23
PKR1	YMR123W	RCE1	Q03530	315 aa		1.09	□□□□□ -2.23
PKR1	YMR123W	HEM25	Q07534	307 aa		1.09	□□□□□ -2.23
PKR1	YMR123W	CSI2	Q08054	341 aa		1.09	□□□□□ -2.23
PKR1	YMR123W	MHF1	Q3E835	90 aa		1.09	□□□□□ -2.23
PKR1	YMR123W	URA2	P07259	2214 aa	Known RBP	1.09	□□□□□ -2.24
PKR1	YMR123W	THP2	O13539	261 aa	Known RBP	1.08	□□□□□ -2.24
PKR1	YMR123W	YPR170W-B	P0C5R9	85 aa		1.08	□□□□□ -2.24
PKR1	YMR123W	VMA11	P32842	164 aa		1.08	□□□□□ -2.24
PKR1	YMR123W	ERV15	P38312	142 aa		1.08	□□□□□ -2.24
PKR1	YMR123W	IRC22	P40006	225 aa		1.08	□□□□□ -2.24
PKR1	YMR123W	GLE2	P40066	365 aa		1.08	□□□□□ -2.24
PKR1	YMR123W	SMX2	P40204	77 aa	Known RBP	1.08	□□□□□ -2.24
PKR1	YMR123W	YIR020C	P40575	100 aa		1.08	□□□□□ -2.24
PKR1	YMR123W	YJR056C	P47115	236 aa		1.08	□□□□□ -2.24
PKR1	YMR123W	LIA1	P47120	325 aa	Known RBP	1.08	□□□□□ -2.24
PKR1	YMR123W	MCM22	P47167	239 aa		1.08	□□□□□ -2.24
PKR1	YMR123W	SIP18	P50263	79 aa		1.08	□□□□□ -2.24
PKR1	YMR123W	SBH2	P52871	88 aa		1.08	□□□□□ -2.24
PKR1	YMR123W	NSA1	P53136	463 aa	Predicted RBP	1.08	□□□□□ -2.24
PKR1	YMR123W	YNL010W	P53981	241 aa	Known RBP	1.08	□□□□□ -2.24
PKR1	YMR123W	FMN1	Q03778	218 aa		1.08	□□□□□ -2.24
PKR1	YMR123W	RIM9	Q04734	239 aa		1.08	□□□□□ -2.24
PKR1	YMR123W	SSQ1	Q05931	657 aa	Predicted RBP	1.08	□□□□□ -2.24
PKR1	YMR123W	IRC19	Q07843	230 aa		1.08	□□□□□ -2.24
PKR1	YMR123W	YOR214C	Q12282	236 aa		1.08	□□□□□ -2.24
PKR1	YMR123W	JLP1	Q12358	412 aa		1.08	□□□□□ -2.24
PKR1	YMR123W	RTR2	Q12378	196 aa		1.08	□□□□□ -2.24
PKR1	YMR123W	YKL183C-A	Q3E765	70 aa		1.08	□□□□□ -2.24
PKR1	YMR123W	CDC28	P00546	298 aa	Known RBP	1.07	□□□□□ -2.24
PKR1	YMR123W	MSW1	P04803	379 aa		1.07	□□□□□ -2.24
PKR1	YMR123W	MER1	P16523	270 aa		1.07	□□□□□ -2.24
PKR1	YMR123W	YMR31	P19955	123 aa		1.07	□□□□□ -2.24
PKR1	YMR123W	HSP30	P25619	332 aa		1.07	□□□□□ -2.24
PKR1	YMR123W	LHP1	P33399	275 aa	Known RBP	1.07	□□□□□ -2.24
PKR1	YMR123W	CLG1	P35190	452 aa		1.07	□□□□□ -2.24
PKR1	YMR123W	YBR063C	P38083	404 aa		1.07	□□□□□ -2.24
PKR1	YMR123W	CUE1	P38428	203 aa		1.07	□□□□□ -2.24
PKR1	YMR123W	SVP26	P38869	228 aa		1.07	□□□□□ -2.24
PKR1	YMR123W	GLR1	P41921	483 aa	Known RBP	1.07	□□□□□ -2.24
PKR1	YMR123W	HAM1	P47119	197 aa	Known RBP	1.07	□□□□□ -2.24
PKR1	YMR123W	BRR6	P53062	197 aa		1.07	□□□□□ -2.24
PKR1	YMR123W	CUS2	P53830	285 aa	Predicted RBP	1.07	□□□□□ -2.24
PKR1	YMR123W	BUD25	P85052	153 aa		1.07	□□□□□ -2.24
PKR1	YMR123W	NUP49	Q02199	472 aa		1.07	□□□□□ -2.24
PKR1	YMR123W	YDR476C	Q03362	224 aa		1.07	□□□□□ -2.24
PKR1	YMR123W	YDR102C	Q03864	110 aa		1.07	□□□□□ -2.24
PKR1	YMR123W	BRX1	Q08235	291 aa	Known RBP	1.07	□□□□□ -2.24
PKR1	YMR123W	FIT3	Q08907	204 aa		1.07	□□□□□ -2.24
PKR1	YMR123W	UIP4	Q08926	304 aa		1.07	□□□□□ -2.24
PKR1	YMR123W	GRE1	Q08969	168 aa		1.07	□□□□□ -2.24
PKR1	YMR123W	YPR202W	Q08993	238 aa		1.07	□□□□□ -2.24
PKR1	YMR123W	MCP1	Q12106	302 aa		1.07	□□□□□ -2.24
PKR1	YMR123W	YCL048W-A	Q2V2Q2	79 aa		1.07	□□□□□ -2.24
PKR1	YMR123W	YKL018C-A	Q3E7A7	99 aa		1.07	□□□□□ -2.24
PKR1	YMR123W	YOR020W-A	Q3E824	90 aa		1.07	□□□□□ -2.24
PKR1	YMR123W	YHR214C-E	Q8TGK0	99 aa		1.07	□□□□□ -2.24
PKR1	YMR123W	CDC39	P25655	2108 aa	Known RBP	1.06	□□□□□ -2.24

Retrieved 100 of 5,963 RNA–protein pairs in 60.5 ms