RNA–Protein interactions for RNA: YHR148W

IMP3, Transcript of Component of the SSU processome, yeastyeast

Gene IMP3, Length 552 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IMP3YHR148W YPR014CQ6B0W2 109 aa1.62□□□□□ -2.15
IMP3YHR148W DUR1,2P32528 1835 aaKnown RBP1.61□□□□□ -2.15
IMP3YHR148W AHC2P25649 128 aa1.61□□□□□ -2.15
IMP3YHR148W ALB1P47019 175 aaPredicted RBP1.61□□□□□ -2.15
IMP3YHR148W HOP2P53187 214 aa1.61□□□□□ -2.15
IMP3YHR148W DGK1Q12382 290 aa1.61□□□□□ -2.15
IMP3YHR148W MPD1Q12404 318 aaKnown RBP1.61□□□□□ -2.15
IMP3YHR148W COA3Q3E7B2 85 aa1.61□□□□□ -2.15
IMP3YHR148W RPS24AP0CX31 135 aaKnown RBP1.6□□□□□ -2.15
IMP3YHR148W RPS24BP0CX32 135 aaKnown RBP1.6□□□□□ -2.15
IMP3YHR148W GCY1P14065 312 aaKnown RBP RIP-Chip data1.6□□□□□ -2.15not detected
IMP3YHR148W RPL37AP49166 88 aaKnown RBP1.6□□□□□ -2.15
IMP3YHR148W UPS3Q04006 179 aa1.6□□□□□ -2.15
IMP3YHR148W NSA2P40078 261 aaKnown RBP1.59□□□□□ -2.15
IMP3YHR148W FMP32P43557 207 aa1.59□□□□□ -2.15
IMP3YHR148W SBH1P52870 82 aa1.59□□□□□ -2.15
IMP3YHR148W YLR460CP54007 376 aa1.59□□□□□ -2.15
IMP3YHR148W SHH4Q06236 168 aa1.59□□□□□ -2.15
IMP3YHR148W DAS2Q12084 232 aa1.59□□□□□ -2.15
IMP3YHR148W YCR023CP25351 611 aa1.58□□□□□ -2.16
IMP3YHR148W YKL102CP34249 101 aa1.58□□□□□ -2.16
IMP3YHR148W CLG1P35190 452 aa1.58□□□□□ -2.16
IMP3YHR148W HUA1P40325 198 aa1.58□□□□□ -2.16
IMP3YHR148W GIM3P53900 129 aa1.58□□□□□ -2.16
IMP3YHR148W RRP17Q04031 235 aaPredicted RBP1.58□□□□□ -2.16
IMP3YHR148W GAL83Q04739 417 aa1.58□□□□□ -2.16
IMP3YHR148W SEN2P16658 377 aa1.57□□□□□ -2.16
IMP3YHR148W STP22P25604 385 aa1.57□□□□□ -2.16
IMP3YHR148W ATP7P30902 174 aa1.57□□□□□ -2.16
IMP3YHR148W GPI17Q04080 534 aa1.57□□□□□ -2.16
IMP3YHR148W CPR5P35176 225 aa1.56□□□□□ -2.16
IMP3YHR148W RRT1P38192 103 aa1.56□□□□□ -2.16
IMP3YHR148W NVJ1P38881 321 aa1.56□□□□□ -2.16
IMP3YHR148W MPM1P40364 252 aa1.56□□□□□ -2.16
IMP3YHR148W SOL1P50278 321 aa1.55□□□□□ -2.16
IMP3YHR148W MET31Q03081 177 aa1.55□□□□□ -2.16
IMP3YHR148W PIR1Q03178 341 aa1.55□□□□□ -2.16
IMP3YHR148W YMR007WQ03675 126 aa1.55□□□□□ -2.16
IMP3YHR148W YET3Q07451 203 aa1.55□□□□□ -2.16
IMP3YHR148W YOR015WQ12169 119 aa1.55□□□□□ -2.16
IMP3YHR148W STF2P16965 84 aa1.54□□□□□ -2.16
IMP3YHR148W FYV4P38783 130 aaPredicted RBP1.54□□□□□ -2.16
IMP3YHR148W POG1P40473 351 aa1.54□□□□□ -2.16
IMP3YHR148W NSE4P43124 402 aa1.54□□□□□ -2.16
IMP3YHR148W UPS1Q05776 175 aa1.54□□□□□ -2.16
IMP3YHR148W TAR1Q8TGM6 124 aa1.54□□□□□ -2.16
IMP3YHR148W YNL200CP40165 246 aaKnown RBP1.53□□□□□ -2.16
IMP3YHR148W RFC2P40348 353 aa1.53□□□□□ -2.16
IMP3YHR148W YGL235WP53071 178 aa1.53□□□□□ -2.16
IMP3YHR148W YDR391CQ04170 232 aa1.53□□□□□ -2.16
IMP3YHR148W JAC1P53193 184 aa1.52□□□□□ -2.17
IMP3YHR148W HPT1Q04178 221 aaKnown RBP1.52□□□□□ -2.17
IMP3YHR148W YIP3P53633 176 aa1.51□□□□□ -2.17
IMP3YHR148W DML1Q03652 475 aa1.51□□□□□ -2.17
IMP3YHR148W YHP1Q04116 353 aa1.51□□□□□ -2.17
IMP3YHR148W ELP6Q04868 273 aa1.51□□□□□ -2.17
IMP3YHR148W YOR381W-AQ3E804 55 aa1.51□□□□□ -2.17
IMP3YHR148W SEC14P24280 304 aaKnown RBP1.5□□□□□ -2.17
IMP3YHR148W MRPL15P36523 253 aa1.5□□□□□ -2.17
IMP3YHR148W MAK5P38112 773 aaPredicted RBP1.5□□□□□ -2.17
IMP3YHR148W SEC72P39742 193 aaKnown RBP1.5□□□□□ -2.17
IMP3YHR148W ATG41Q12048 136 aa1.5□□□□□ -2.17
IMP3YHR148W TRR1P29509 319 aaKnown RBP1.49□□□□□ -2.17
IMP3YHR148W ETR1P38071 380 aa1.49□□□□□ -2.17
IMP3YHR148W YBR242WP38331 238 aa1.49□□□□□ -2.17
IMP3YHR148W TTI2P47168 421 aa1.49□□□□□ -2.17
IMP3YHR148W RIM9Q04734 239 aa1.49□□□□□ -2.17
IMP3YHR148W ATG38Q05789 226 aaKnown RBP1.49□□□□□ -2.17
IMP3YHR148W YPR203WQ08994 102 aa1.49□□□□□ -2.17
IMP3YHR148W HSP30P25619 332 aa1.48□□□□□ -2.17
IMP3YHR148W UBC8P28263 218 aa1.48□□□□□ -2.17
IMP3YHR148W YBL010CP32788 280 aa1.48□□□□□ -2.17
IMP3YHR148W VPS28Q02767 242 aa1.48□□□□□ -2.17
IMP3YHR148W RIF1P29539 1916 aa1.48□□□□□ -2.17
IMP3YHR148W YPR127WQ06494 345 aa1.47□□□□□ -2.17
IMP3YHR148W YOR214CQ12282 236 aa1.47□□□□□ -2.17
IMP3YHR148W PEX11Q12462 236 aa1.47□□□□□ -2.17
IMP3YHR148W CSH1P38287 376 aa1.46□□□□□ -2.18
IMP3YHR148W CCS1P40202 249 aaKnown RBP1.46□□□□□ -2.18
IMP3YHR148W YKR005CQ02203 525 aa1.46□□□□□ -2.18
IMP3YHR148W MAK31P23059 88 aa1.45□□□□□ -2.18
IMP3YHR148W EGD2P38879 174 aaKnown RBP1.45□□□□□ -2.18
IMP3YHR148W LCL2Q08045 131 aa1.45□□□□□ -2.18
IMP3YHR148W YMR030W-AQ3E760 96 aa1.45□□□□□ -2.18
IMP3YHR148W YHL037CP38733 133 aa1.44□□□□□ -2.18
IMP3YHR148W SRP14P38985 146 aa1.44□□□□□ -2.18
IMP3YHR148W RPL37BP51402 88 aaKnown RBP1.44□□□□□ -2.18
IMP3YHR148W CHD1P32657 1468 aa1.43□□□□□ -2.18
IMP3YHR148W YER188C-AP0C0V2 99 aa1.43□□□□□ -2.18
IMP3YHR148W RPL35AP0CX84 120 aaKnown RBP1.43□□□□□ -2.18
IMP3YHR148W RPL35BP0CX85 120 aaKnown RBP1.43□□□□□ -2.18
IMP3YHR148W RAD51P25454 400 aa1.43□□□□□ -2.18
IMP3YHR148W SBH2P52871 88 aa1.43□□□□□ -2.18
IMP3YHR148W AHT1P29589 182 aa1.42□□□□□ -2.18
IMP3YHR148W YRA2P36036 203 aaKnown RBP RIP-Chip data1.42□□□□□ -2.18not detected
IMP3YHR148W GRX5Q02784 150 aa1.42□□□□□ -2.18
IMP3YHR148W YLR050CQ12155 161 aaKnown RBP1.42□□□□□ -2.18
IMP3YHR148W YFL051CP43552 160 aa1.41□□□□□ -2.18
IMP3YHR148W TIM13P53299 105 aa1.41□□□□□ -2.18
IMP3YHR148W YNL140CP53910 189 aa1.41□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 48.8 ms