RNA–Protein interactions for RNA: YGL090W

LIF1, Transcript of Component of the DNA ligase IV complex, yeastyeast

Gene LIF1, Length 1,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LIF1YGL090W HTL1Q9URQ5 78 aa2.72□□□□□ -1.97
LIF1YGL090W VMR1P38735 1592 aa2.71□□□□□ -1.98
LIF1YGL090W YHR139C-AO13536 103 aa2.71□□□□□ -1.98
LIF1YGL090W VAR1P02381 398 aa2.71□□□□□ -1.98
LIF1YGL090W ATP5P09457 212 aa2.71□□□□□ -1.98
LIF1YGL090W MRS3P10566 314 aa2.71□□□□□ -1.98
LIF1YGL090W CKS1P20486 150 aaKnown RBP2.71□□□□□ -1.98
LIF1YGL090W SRP21P32342 167 aa2.71□□□□□ -1.98
LIF1YGL090W CSE2P33308 149 aa2.71□□□□□ -1.98
LIF1YGL090W SHB17P36136 271 aaKnown RBP2.71□□□□□ -1.98
LIF1YGL090W SHE1P38200 338 aa2.71□□□□□ -1.98
LIF1YGL090W PHO89P38361 574 aa2.71□□□□□ -1.98
LIF1YGL090W PTI1P39927 425 aaPredicted RBP2.71□□□□□ -1.98
LIF1YGL090W YJL213WP40896 331 aa2.71□□□□□ -1.98
LIF1YGL090W GPI2P46961 280 aa2.71□□□□□ -1.98
LIF1YGL090W ALG9P53868 555 aaKnown RBP2.71□□□□□ -1.98
LIF1YGL090W APJ1P53940 528 aa2.71□□□□□ -1.98
LIF1YGL090W IES4Q08561 116 aa2.71□□□□□ -1.98
LIF1YGL090W YPL278CQ08990 100 aa2.71□□□□□ -1.98
LIF1YGL090W YPL162CQ12042 273 aa2.71□□□□□ -1.98
LIF1YGL090W SPC3Q12133 184 aa2.71□□□□□ -1.98
LIF1YGL090W NUP188P52593 1655 aaKnown RBP2.71□□□□□ -1.98
LIF1YGL090W TRP1P00912 224 aa2.7□□□□□ -1.98
LIF1YGL090W RPS14AP06367 137 aaKnown RBP2.7□□□□□ -1.98
LIF1YGL090W HAP2P06774 265 aa2.7□□□□□ -1.98
LIF1YGL090W RPS8AP0CX39 200 aaKnown RBP2.7□□□□□ -1.98
LIF1YGL090W RPS8BP0CX40 200 aaKnown RBP2.7□□□□□ -1.98
LIF1YGL090W GPA2P10823 449 aa2.7□□□□□ -1.98
LIF1YGL090W SEC59P20048 519 aa2.7□□□□□ -1.98
LIF1YGL090W CCA1P21269 546 aa2.7□□□□□ -1.98
LIF1YGL090W YCR022CP25620 114 aa2.7□□□□□ -1.98
LIF1YGL090W YOR062CP36025 268 aa2.7□□□□□ -1.98
LIF1YGL090W RPF1P38805 295 aaKnown RBP2.7□□□□□ -1.98
LIF1YGL090W BAT1P38891 393 aaKnown RBP2.7□□□□□ -1.98
LIF1YGL090W RPS14BP39516 138 aaKnown RBP2.7□□□□□ -1.98
LIF1YGL090W AVT2P39981 480 aa2.7□□□□□ -1.98
LIF1YGL090W IRC22P40006 225 aa2.7□□□□□ -1.98
LIF1YGL090W YND1P40009 630 aa2.7□□□□□ -1.98
LIF1YGL090W AVT6P40074 448 aa2.7□□□□□ -1.98
LIF1YGL090W FIP1P45976 327 aa2.7□□□□□ -1.98
LIF1YGL090W RPA43P46669 326 aa2.7□□□□□ -1.98
LIF1YGL090W YGR015CP53208 328 aa2.7□□□□□ -1.98
LIF1YGL090W DAD3P69850 94 aa2.7□□□□□ -1.98
LIF1YGL090W NHP10Q03435 203 aa2.7□□□□□ -1.98
LIF1YGL090W LPP1Q04396 274 aa2.7□□□□□ -1.98
LIF1YGL090W YMR254CQ04838 102 aa2.7□□□□□ -1.98
LIF1YGL090W JID1Q12350 301 aa2.7□□□□□ -1.98
LIF1YGL090W SAS5Q99314 248 aa2.7□□□□□ -1.98
LIF1YGL090W IML1P47170 1584 aa2.7□□□□□ -1.98
LIF1YGL090W YLR462WO13556 202 aa2.69□□□□□ -1.98
LIF1YGL090W RPL15AP05748 204 aaKnown RBP2.69□□□□□ -1.98
LIF1YGL090W ADH3P07246 375 aaKnown RBP2.69□□□□□ -1.98
LIF1YGL090W BGL2P15703 313 aaKnown RBP2.69□□□□□ -1.98
LIF1YGL090W RPB3P16370 318 aaKnown RBP2.69□□□□□ -1.98
LIF1YGL090W YCR025CP25352 136 aa2.69□□□□□ -1.98
LIF1YGL090W RPL14AP36105 138 aaKnown RBP2.69□□□□□ -1.98
LIF1YGL090W SKG1P36169 355 aa2.69□□□□□ -1.98
LIF1YGL090W ETR1P38071 380 aa2.69□□□□□ -1.98
LIF1YGL090W RPL14BP38754 138 aaKnown RBP2.69□□□□□ -1.98
LIF1YGL090W TEM1P38987 245 aa2.69□□□□□ -1.98
LIF1YGL090W GGC1P38988 300 aa2.69□□□□□ -1.98
LIF1YGL090W YEL075CP39972 122 aa2.69□□□□□ -1.98
LIF1YGL090W PRM5P40476 318 aa2.69□□□□□ -1.98
LIF1YGL090W MOB1P40484 314 aa2.69□□□□□ -1.98
LIF1YGL090W PFS2P42841 465 aaKnown RBP2.69□□□□□ -1.98
LIF1YGL090W GON7P46984 123 aa2.69□□□□□ -1.98
LIF1YGL090W YGL262WP53054 175 aa2.69□□□□□ -1.98
LIF1YGL090W FMP48P53233 369 aa2.69□□□□□ -1.98
LIF1YGL090W YDR415CQ04033 374 aaPredicted RBP2.69□□□□□ -1.98
LIF1YGL090W YLR281CQ05863 155 aa2.69□□□□□ -1.98
LIF1YGL090W SMT3Q12306 101 aaKnown RBP2.69□□□□□ -1.98
LIF1YGL090W KTI11Q3E840 82 aa2.69□□□□□ -1.98
LIF1YGL090W TDA8Q6B2U8 126 aa2.69□□□□□ -1.98
LIF1YGL090W URA5P13298 226 aaKnown RBP2.68□□□□□ -1.98
LIF1YGL090W BET1P22804 142 aa2.68□□□□□ -1.98
LIF1YGL090W HYP2P23301 157 aaKnown RBP2.68□□□□□ -1.98
LIF1YGL090W LDB16P25587 256 aa2.68□□□□□ -1.98
LIF1YGL090W ATS1P31386 333 aa2.68□□□□□ -1.98
LIF1YGL090W UTP30P36144 274 aaKnown RBP2.68□□□□□ -1.98
LIF1YGL090W CSH1P38287 376 aa2.68□□□□□ -1.98
LIF1YGL090W RPB11P38902 120 aa2.68□□□□□ -1.98
LIF1YGL090W TIM17P39515 158 aa2.68□□□□□ -1.98
LIF1YGL090W YNL208WP40159 199 aaKnown RBP2.68□□□□□ -1.98
LIF1YGL090W YIL012WP40551 113 aa2.68□□□□□ -1.98
LIF1YGL090W SFT1P43682 97 aa2.68□□□□□ -1.98
LIF1YGL090W NCA3P46955 337 aa2.68□□□□□ -1.98
LIF1YGL090W LSM8P47093 109 aaKnown RBP2.68□□□□□ -1.98
LIF1YGL090W ELC1Q03071 99 aa2.68□□□□□ -1.98
LIF1YGL090W SPG3Q04398 127 aaPredicted RBP2.68□□□□□ -1.98
LIF1YGL090W FMP42Q04991 504 aa2.68□□□□□ -1.98
LIF1YGL090W YPS3Q12303 508 aa2.68□□□□□ -1.98
LIF1YGL090W TIM22Q12328 207 aa2.68□□□□□ -1.98
LIF1YGL090W YIL177CP40434 1758 aa2.67□□□□□ -1.98
LIF1YGL090W YJL225CP40889 1758 aa2.67□□□□□ -1.98
LIF1YGL090W YER039C-AP0CD97 72 aa2.67□□□□□ -1.98
LIF1YGL090W AHT1P29589 182 aa2.67□□□□□ -1.98
LIF1YGL090W YRA2P36036 203 aaKnown RBP RIP-Chip data2.67□□□□□ -1.98not detected
LIF1YGL090W TRS20P38334 175 aa2.67□□□□□ -1.98
LIF1YGL090W YHR140WP38842 239 aa2.67□□□□□ -1.98
LIF1YGL090W YER134CP40081 178 aa2.67□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms