RNA–Protein interactions for RNA: YER127W

LCP5, Essential protein involved in maturation of 18S rRNA, yeast

Gene LCP5, Length 1,074 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCP5	YER127W	SPC2	Q04969	178 aa		4.28	□□□□□ -1.72
LCP5	YER127W	CSM4	Q08955	156 aa		4.28	□□□□□ -1.72
LCP5	YER127W	YCT1	Q12235	531 aa		4.28	□□□□□ -1.72
LCP5	YER127W	RTR2	Q12378	196 aa		4.28	□□□□□ -1.72
LCP5	YER127W	YCR016W	P25617	290 aa	Known RBP	4.27	□□□□□ -1.73
LCP5	YER127W	SED1	Q01589	338 aa		4.27	□□□□□ -1.73
LCP5	YER127W	YDR102C	Q03864	110 aa		4.27	□□□□□ -1.73
LCP5	YER127W	BNA7	Q04066	261 aa		4.27	□□□□□ -1.73
LCP5	YER127W	YDR391C	Q04170	232 aa		4.27	□□□□□ -1.73
LCP5	YER127W	AGC1	Q12482	902 aa		4.27	□□□□□ -1.73
LCP5	YER127W	SNF6	P18888	332 aa		4.26	□□□□□ -1.73
LCP5	YER127W	YKL102C	P34249	101 aa		4.26	□□□□□ -1.73
LCP5	YER127W	SKG1	P36169	355 aa		4.26	□□□□□ -1.73
LCP5	YER127W	FAR7	P43592	221 aa		4.26	□□□□□ -1.73
LCP5	YER127W	GPI17	Q04080	534 aa		4.26	□□□□□ -1.73
LCP5	YER127W	SYC1	Q08553	188 aa	Predicted RBP	4.26	□□□□□ -1.73
LCP5	YER127W	UIP4	Q08926	304 aa		4.26	□□□□□ -1.73
LCP5	YER127W	NTG1	P31378	399 aa		4.25	□□□□□ -1.73
LCP5	YER127W	SRP102	P36057	244 aa	Predicted RBP	4.25	□□□□□ -1.73
LCP5	YER127W	GOS1	P38736	223 aa		4.25	□□□□□ -1.73
LCP5	YER127W	DIA1	P54005	336 aa		4.25	□□□□□ -1.73
LCP5	YER127W	SPG4	Q04438	115 aa		4.25	□□□□□ -1.73
LCP5	YER127W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	RIP-Chip
LCP5	YER127W	NQM1	P53228	333 aa	Predicted RBP	4.24	□□□□□ -1.73
LCP5	YER127W	SSU72	P53538	206 aa	Predicted RBP	4.24	□□□□□ -1.73
LCP5	YER127W	YNR064C	P53750	290 aa		4.24	□□□□□ -1.73
LCP5	YER127W	YLR179C	Q06252	201 aa	Known RBP	4.24	□□□□□ -1.73
LCP5	YER127W	SPC3	Q12133	184 aa		4.24	□□□□□ -1.73
LCP5	YER127W	TIM9	O74700	87 aa		4.23	□□□□□ -1.73
LCP5	YER127W	DSF1	P0CX08	502 aa		4.23	□□□□□ -1.73
LCP5	YER127W	YNR073C	P0CX09	502 aa		4.23	□□□□□ -1.73
LCP5	YER127W	GON7	P46984	123 aa		4.23	□□□□□ -1.73
LCP5	YER127W	YGL034C	P53186	121 aa		4.23	□□□□□ -1.73
LCP5	YER127W	MIX17	Q03667	156 aa		4.23	□□□□□ -1.73
LCP5	YER127W	CSI2	Q08054	341 aa		4.23	□□□□□ -1.73
LCP5	YER127W	USB1	Q12208	290 aa	Known RBP	4.23	□□□□□ -1.73
LCP5	YER127W	PPA2	P28239	310 aa		4.22	□□□□□ -1.73
LCP5	YER127W	THO1	P40040	218 aa	Known RBP	4.22	□□□□□ -1.73
LCP5	YER127W	GLR1	P41921	483 aa	Known RBP	4.22	□□□□□ -1.73
LCP5	YER127W	MRH4	P53166	561 aa		4.22	□□□□□ -1.73
LCP5	YER127W	GEP7	P53171	287 aa		4.22	□□□□□ -1.73
LCP5	YER127W	PRM8	P53174	237 aa		4.22	□□□□□ -1.73
LCP5	YER127W	YDC1	Q02896	317 aa		4.22	□□□□□ -1.73
LCP5	YER127W	YMR279C	Q03263	540 aa		4.22	□□□□□ -1.73
LCP5	YER127W	GRH1	Q04410	372 aa	Known RBP	4.22	□□□□□ -1.73
LCP5	YER127W	RIM9	Q04734	239 aa		4.22	□□□□□ -1.73
LCP5	YER127W	PRP11	Q07350	266 aa	Predicted RBP	4.22	□□□□□ -1.73
LCP5	YER127W	MRPS28	P21771	286 aa		4.21	□□□□□ -1.74
LCP5	YER127W	DBF2	P22204	572 aa		4.21	□□□□□ -1.74
LCP5	YER127W	AIM36	Q03798	255 aa		4.21	□□□□□ -1.74
LCP5	YER127W	RDS3	Q06835	107 aa	Predicted RBP	4.21	□□□□□ -1.74
LCP5	YER127W	YOR268C	Q08734	132 aa		4.21	□□□□□ -1.74
LCP5	YER127W	YOR289W	Q12012	251 aa	Predicted RBP	4.21	□□□□□ -1.74
LCP5	YER127W	RIB3	Q99258	208 aa		4.21	□□□□□ -1.74
LCP5	YER127W	YGL041W-A	P0C5N3	154 aa		4.2	□□□□□ -1.74
LCP5	YER127W	UTR5	P32630	166 aa		4.2	□□□□□ -1.74
LCP5	YER127W	FLX1	P40464	311 aa		4.2	□□□□□ -1.74
LCP5	YER127W	YJL016W	P47072	561 aa		4.2	□□□□□ -1.74
LCP5	YER127W	TMA22	P47089	198 aa	Predicted RBP	4.2	□□□□□ -1.74
LCP5	YER127W	NUP49	Q02199	472 aa		4.2	□□□□□ -1.74
LCP5	YER127W	YMR315W	Q04869	349 aa	Known RBP	4.2	□□□□□ -1.74
LCP5	YER127W	MSA1	Q08471	629 aa		4.2	□□□□□ -1.74
LCP5	YER127W	COX5B	P00425	151 aa		4.19	□□□□□ -1.74
LCP5	YER127W	FBA1	P14540	359 aa	Known RBP	4.19	□□□□□ -1.74
LCP5	YER127W	VMA11	P32842	164 aa		4.19	□□□□□ -1.74
LCP5	YER127W	NRK1	P53915	240 aa		4.19	□□□□□ -1.74
LCP5	YER127W	YMR226C	Q05016	267 aa	Known RBP	4.19	□□□□□ -1.74
LCP5	YER127W	YCL048W-A	Q2V2Q2	79 aa		4.19	□□□□□ -1.74
LCP5	YER127W	MATALPHA1	P0CY06	175 aa		4.18	□□□□□ -1.74
LCP5	YER127W	HMLALPHA1	P0CY07	175 aa		4.18	□□□□□ -1.74
LCP5	YER127W	STE18	P18852	110 aa		4.18	□□□□□ -1.74
LCP5	YER127W	TMA19	P35691	167 aa	Known RBP	4.18	□□□□□ -1.74
LCP5	YER127W	CCC1	P47818	322 aa		4.18	□□□□□ -1.74
LCP5	YER127W	RMR1	P53060	241 aa		4.18	□□□□□ -1.74
LCP5	YER127W	YPL067C	Q02754	198 aa		4.18	□□□□□ -1.74
LCP5	YER127W	ARR2	Q06597	130 aa		4.18	□□□□□ -1.74
LCP5	YER127W	YOR186W	Q08560	144 aa		4.18	□□□□□ -1.74
LCP5	YER127W	SEC22	P22214	214 aa		4.17	□□□□□ -1.74
LCP5	YER127W	PDX3	P38075	228 aa	Known RBP	4.17	□□□□□ -1.74
LCP5	YER127W	YBR063C	P38083	404 aa		4.17	□□□□□ -1.74
LCP5	YER127W	YER085C	P40058	173 aa		4.17	□□□□□ -1.74
LCP5	YER127W	YDR248C	Q03786	193 aa		4.17	□□□□□ -1.74
LCP5	YER127W	GAL83	Q04739	417 aa		4.17	□□□□□ -1.74
LCP5	YER127W	ELP6	Q04868	273 aa		4.17	□□□□□ -1.74
LCP5	YER127W	YLR283W	Q05867	314 aa		4.17	□□□□□ -1.74
LCP5	YER127W	YLR126C	Q12288	251 aa		4.17	□□□□□ -1.74
LCP5	YER127W	RPL39	P04650	51 aa		4.16	□□□□□ -1.74
LCP5	YER127W	RPL30	P14120	105 aa	Known RBP	4.16	□□□□□ -1.74
LCP5	YER127W	UBC8	P28263	218 aa		4.16	□□□□□ -1.74
LCP5	YER127W	SUA7	P29055	345 aa	Predicted RBP	4.16	□□□□□ -1.74
LCP5	YER127W	RCN1	P36054	211 aa		4.16	□□□□□ -1.74
LCP5	YER127W	TIR3	P40552	269 aa		4.16	□□□□□ -1.74
LCP5	YER127W	PGA1	P53896	198 aa		4.16	□□□□□ -1.74
LCP5	YER127W	COG5	P53951	403 aa		4.16	□□□□□ -1.74
LCP5	YER127W	HHT1	P61830	136 aa		4.16	□□□□□ -1.74
LCP5	YER127W	RFU1	Q08003	200 aa		4.16	□□□□□ -1.74
LCP5	YER127W	YGR035W-A	Q45U48	73 aa		4.16	□□□□□ -1.74
LCP5	YER127W	OAC1	P32332	324 aa		4.15	□□□□□ -1.75
LCP5	YER127W	CTR2	P38865	189 aa		4.15	□□□□□ -1.75
LCP5	YER127W	IPT1	P38954	527 aa		4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 54.4 ms