RNA–Protein interactions for RNA: YDR427W

RPN9, Transcript of Non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN9, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN9YDR427W FUS2Q05670 677 aa1.6□□□□□ -2.15
RPN9YDR427W RAD28Q12021 506 aa1.6□□□□□ -2.15
RPN9YDR427W YDL180WQ12301 547 aa1.6□□□□□ -2.15
RPN9YDR427W USO1P25386 1790 aa1.59□□□□□ -2.15
RPN9YDR427W GEA1P47102 1408 aaPredicted RBP1.59□□□□□ -2.15
RPN9YDR427W DNF3Q12674 1656 aa1.59□□□□□ -2.15
RPN9YDR427W SER2P42941 309 aa1.59□□□□□ -2.15
RPN9YDR427W YNL184CP53876 108 aa1.59□□□□□ -2.15
RPN9YDR427W DGA1Q08650 418 aa1.59□□□□□ -2.15
RPN9YDR427W APA2P22108 325 aa1.58□□□□□ -2.16
RPN9YDR427W ADE1P27616 306 aa1.58□□□□□ -2.16
RPN9YDR427W TVP38P36164 337 aa1.58□□□□□ -2.16
RPN9YDR427W AIM2P39721 246 aa1.58□□□□□ -2.16
RPN9YDR427W UBC12P52491 188 aa1.58□□□□□ -2.16
RPN9YDR427W FAS1P07149 2051 aaKnown RBP1.58□□□□□ -2.16
RPN9YDR427W IML1P47170 1584 aa1.58□□□□□ -2.16
RPN9YDR427W RAD9P14737 1309 aa1.58□□□□□ -2.16
RPN9YDR427W NUP188P52593 1655 aaKnown RBP1.58□□□□□ -2.16
RPN9YDR427W LTE1P07866 1435 aa1.57□□□□□ -2.16
RPN9YDR427W TY1B-NL2Q99337 1749 aaKnown RBP1.57□□□□□ -2.16
RPN9YDR427W IQG1Q12280 1495 aa1.57□□□□□ -2.16
RPN9YDR427W YJR111CP47148 283 aaKnown RBP1.57□□□□□ -2.16
RPN9YDR427W ARO8P53090 500 aaKnown RBP1.57□□□□□ -2.16
RPN9YDR427W DYN3Q04949 312 aa1.57□□□□□ -2.16
RPN9YDR427W IGO2Q9P305 131 aa1.57□□□□□ -2.16
RPN9YDR427W NUP192P47054 1683 aa1.57□□□□□ -2.16
RPN9YDR427W YAR023CD6VPM8 179 aa1.56□□□□□ -2.16
RPN9YDR427W FMP23P38231 175 aa1.56□□□□□ -2.16
RPN9YDR427W YER076CP40049 302 aa1.56□□□□□ -2.16
RPN9YDR427W YER134CP40081 178 aa1.56□□□□□ -2.16
RPN9YDR427W MPA43P53583 542 aaPredicted RBP1.56□□□□□ -2.16
RPN9YDR427W YMR099CQ03161 297 aaKnown RBP1.56□□□□□ -2.16
RPN9YDR427W YLR031WQ07978 186 aa1.56□□□□□ -2.16
RPN9YDR427W PDR5P33302 1511 aaKnown RBP1.56□□□□□ -2.16
RPN9YDR427W SNF4P12904 322 aa1.55□□□□□ -2.16
RPN9YDR427W TVP23P38962 199 aa1.55□□□□□ -2.16
RPN9YDR427W PDS1P40316 373 aaPredicted RBP1.55□□□□□ -2.16
RPN9YDR427W TDA4P47153 279 aa1.55□□□□□ -2.16
RPN9YDR427W RTC4P53850 401 aa1.55□□□□□ -2.16
RPN9YDR427W YMR315WQ04869 349 aaKnown RBP1.55□□□□□ -2.16
RPN9YDR427W NAT3Q06504 195 aa1.55□□□□□ -2.16
RPN9YDR427W YOL014WQ08110 124 aa1.55□□□□□ -2.16
RPN9YDR427W YOL024WQ08172 172 aa1.55□□□□□ -2.16
RPN9YDR427W SEC7P11075 2009 aaKnown RBP1.55□□□□□ -2.16
RPN9YDR427W YSP2Q06681 1438 aa1.55□□□□□ -2.16
RPN9YDR427W TRM3Q07527 1436 aa1.55□□□□□ -2.16
RPN9YDR427W UBC7Q02159 165 aa1.54□□□□□ -2.16
RPN9YDR427W YNL146C-AQ3E7Z1 64 aa1.54□□□□□ -2.16
RPN9YDR427W MSB2P32334 1306 aa1.54□□□□□ -2.16
RPN9YDR427W MMS1Q06211 1407 aa1.54□□□□□ -2.16
RPN9YDR427W TY4B-HP0C2J7 1802 aa1.54□□□□□ -2.16
RPN9YDR427W TY4B-JP47024 1803 aa1.54□□□□□ -2.16
RPN9YDR427W PHO85P17157 305 aa1.53□□□□□ -2.16
RPN9YDR427W TAH1P25638 111 aaPredicted RBP1.53□□□□□ -2.16
RPN9YDR427W CAT8P39113 1433 aa1.53□□□□□ -2.16
RPN9YDR427W MTW1P39731 289 aa1.53□□□□□ -2.16
RPN9YDR427W YPL073CP40323 161 aa1.53□□□□□ -2.16
RPN9YDR427W FLX1P40464 311 aa1.53□□□□□ -2.16
RPN9YDR427W NOC4Q06512 552 aaPredicted RBP1.53□□□□□ -2.16
RPN9YDR427W YPR174CQ06616 221 aaPredicted RBP1.53□□□□□ -2.16
RPN9YDR427W YHR007C-AQ07074 71 aa1.53□□□□□ -2.16
RPN9YDR427W YLR036CQ07986 203 aa1.53□□□□□ -2.16
RPN9YDR427W IRC23Q08416 157 aa1.53□□□□□ -2.16
RPN9YDR427W YML100W-AQ8TGT0 57 aa1.53□□□□□ -2.16
RPN9YDR427W PDR11P40550 1411 aa1.52□□□□□ -2.17
RPN9YDR427W MDM35O60200 86 aa1.52□□□□□ -2.17
RPN9YDR427W RIO2P40160 425 aaKnown RBP1.52□□□□□ -2.17
RPN9YDR427W YAE1P47118 141 aaPredicted RBP1.52□□□□□ -2.17
RPN9YDR427W YMR295CQ03559 197 aa1.52□□□□□ -2.17
RPN9YDR427W RNH202Q05635 350 aa1.52□□□□□ -2.17
RPN9YDR427W YDL085C-AQ3E7B7 68 aaKnown RBP1.52□□□□□ -2.17
RPN9YDR427W TIR1P10863 254 aa1.51□□□□□ -2.17
RPN9YDR427W MGT1P26188 188 aa1.51□□□□□ -2.17
RPN9YDR427W CAF4P36130 643 aa1.51□□□□□ -2.17
RPN9YDR427W ECM4P36156 370 aa1.51□□□□□ -2.17
RPN9YDR427W YNL247WP53852 767 aaKnown RBP1.51□□□□□ -2.17
RPN9YDR427W DAD4P69851 72 aa1.51□□□□□ -2.17
RPN9YDR427W SHH3Q04487 196 aa1.51□□□□□ -2.17
RPN9YDR427W VAR1P02381 398 aa1.5□□□□□ -2.17
RPN9YDR427W SHG1P38337 142 aa1.5□□□□□ -2.17
RPN9YDR427W YHL018WP38744 120 aaPredicted RBP1.5□□□□□ -2.17
RPN9YDR427W YFL019CP43576 117 aa1.5□□□□□ -2.17
RPN9YDR427W TMA22P47089 198 aaPredicted RBP1.5□□□□□ -2.17
RPN9YDR427W PGA1P53896 198 aa1.5□□□□□ -2.17
RPN9YDR427W GIM3P53900 129 aa1.5□□□□□ -2.17
RPN9YDR427W NRK1P53915 240 aa1.5□□□□□ -2.17
RPN9YDR427W GRX8Q05926 109 aa1.5□□□□□ -2.17
RPN9YDR427W YRF1-2P40105 1681 aa1.5□□□□□ -2.17
RPN9YDR427W SRB8P25648 1427 aa1.49□□□□□ -2.17
RPN9YDR427W FKS3Q04952 1785 aa1.49□□□□□ -2.17
RPN9YDR427W RRP5Q05022 1729 aaKnown RBP1.49□□□□□ -2.17
RPN9YDR427W TRX3P25372 127 aa1.49□□□□□ -2.17
RPN9YDR427W HOP2P53187 214 aa1.49□□□□□ -2.17
RPN9YDR427W CWC27Q02770 301 aa1.49□□□□□ -2.17
RPN9YDR427W VPS71Q03433 280 aa1.49□□□□□ -2.17
RPN9YDR427W RCE1Q03530 315 aa1.49□□□□□ -2.17
RPN9YDR427W PRP11Q07350 266 aaPredicted RBP1.49□□□□□ -2.17
RPN9YDR427W ATP7P30902 174 aa1.48□□□□□ -2.17
RPN9YDR427W PAM17P36147 197 aa1.48□□□□□ -2.17
RPN9YDR427W YHL042WP38729 150 aa1.48□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms