RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W KEI1Q06346 221 aa1.25□□□□□ -2.21
TRM3YDL112W PBP4Q07362 185 aaKnown RBP1.25□□□□□ -2.21
TRM3YDL112W TIM18Q08749 192 aa1.25□□□□□ -2.21
TRM3YDL112W YPL225WQ08971 146 aaKnown RBP1.25□□□□□ -2.21
TRM3YDL112W YPR063CQ12160 140 aa1.25□□□□□ -2.21
TRM3YDL112W FCY1Q12178 158 aa1.25□□□□□ -2.21
TRM3YDL112W JID1Q12350 301 aa1.25□□□□□ -2.21
TRM3YDL112W AGC1Q12482 902 aa1.25□□□□□ -2.21
TRM3YDL112W UBA3Q99344 299 aa1.25□□□□□ -2.21
TRM3YDL112W ARG80P07249 177 aa1.25□□□□□ -2.21
TRM3YDL112W DFR1P07807 211 aaKnown RBP RIP-Chip data1.25□□□□□ -2.21not detected
TRM3YDL112W RPL5P26321 297 aaKnown RBP1.25□□□□□ -2.21
TRM3YDL112W LST8P41318 303 aa1.25□□□□□ -2.21
TRM3YDL112W ATG18P43601 500 aa1.25□□□□□ -2.21
TRM3YDL112W ATG41Q12048 136 aa1.25□□□□□ -2.21
TRM3YDL112W SOD1P00445 154 aaKnown RBP1.25□□□□□ -2.21
TRM3YDL112W HTB1P02293 131 aaKnown RBP1.25□□□□□ -2.21
TRM3YDL112W PET494P07390 489 aaPredicted RBP1.25□□□□□ -2.21
TRM3YDL112W AGA2P32781 87 aa1.25□□□□□ -2.21
TRM3YDL112W POR2P40478 281 aa1.25□□□□□ -2.21
TRM3YDL112W CWC23P52868 283 aaPredicted RBP1.25□□□□□ -2.21
TRM3YDL112W SLX9P53251 210 aaPredicted RBP1.25□□□□□ -2.21
TRM3YDL112W GIM3P53900 129 aa1.25□□□□□ -2.21
TRM3YDL112W DCS1Q06151 350 aa1.25□□□□□ -2.21
TRM3YDL112W MSH5Q12175 901 aa1.25□□□□□ -2.21
TRM3YDL112W RBD2Q12270 262 aa1.25□□□□□ -2.21
TRM3YDL112W YOR192C-CQ3E736 78 aa1.25□□□□□ -2.21
TRM3YDL112W SEN2P16658 377 aa1.24□□□□□ -2.21
TRM3YDL112W YRA2P36036 203 aaKnown RBP RIP-Chip data1.24□□□□□ -2.21not detected
TRM3YDL112W RPL13BP40212 199 aaKnown RBP1.24□□□□□ -2.21
TRM3YDL112W OTU1P43558 301 aa1.24□□□□□ -2.21
TRM3YDL112W ERV29P53337 310 aa1.24□□□□□ -2.21
TRM3YDL112W GRX5Q02784 150 aa1.24□□□□□ -2.21
TRM3YDL112W BET5Q03630 159 aa1.24□□□□□ -2.21
TRM3YDL112W LDS2Q08218 356 aa1.24□□□□□ -2.21
TRM3YDL112W YOL118CQ08259 102 aa1.24□□□□□ -2.21
TRM3YDL112W VAM10Q08474 114 aa1.24□□□□□ -2.21
TRM3YDL112W FEX1Q08913 375 aa1.24□□□□□ -2.21
TRM3YDL112W FEX2Q08991 375 aa1.24□□□□□ -2.21
TRM3YDL112W RPL13AQ12690 199 aaPredicted RBP1.24□□□□□ -2.21
TRM3YDL112W PET20Q99373 253 aa1.24□□□□□ -2.21
TRM3YDL112W YDR157WA0A023PZE8 133 aa1.24□□□□□ -2.21
TRM3YDL112W GIS2P53849 153 aaKnown RBP RIP-Chip data1.24□□□□□ -2.21not detected
TRM3YDL112W SWT21P53873 357 aaPredicted RBP1.24□□□□□ -2.21
TRM3YDL112W NMA1Q06178 401 aaKnown RBP1.24□□□□□ -2.21
TRM3YDL112W ASR1Q06834 288 aa1.24□□□□□ -2.21
TRM3YDL112W SCP1Q08873 200 aa1.24□□□□□ -2.21
TRM3YDL112W DCP1Q12517 231 aaPredicted RBP1.24□□□□□ -2.21
TRM3YDL112W YNL146C-AQ3E7Z1 64 aa1.24□□□□□ -2.21
TRM3YDL112W TAR1Q8TGM6 124 aa1.24□□□□□ -2.21
TRM3YDL112W YCR022CP25620 114 aa1.24□□□□□ -2.21
TRM3YDL112W ECM33P38248 429 aaKnown RBP1.24□□□□□ -2.21
TRM3YDL112W SNF11P38956 169 aa1.24□□□□□ -2.21
TRM3YDL112W VHT1P53241 593 aa1.24□□□□□ -2.21
TRM3YDL112W MEH1Q02205 184 aa1.24□□□□□ -2.21
TRM3YDL112W SPO19Q03029 223 aa1.24□□□□□ -2.21
TRM3YDL112W THI74Q04083 370 aa1.24□□□□□ -2.21
TRM3YDL112W YOS1Q3E834 85 aa1.24□□□□□ -2.21
TRM3YDL112W ISN1Q99312 450 aa1.24□□□□□ -2.21
TRM3YDL112W YAR068WP39564 161 aa1.24□□□□□ -2.21
TRM3YDL112W YJL027CP47063 138 aaPredicted RBP1.24□□□□□ -2.21
TRM3YDL112W EST3Q03096 181 aa1.24□□□□□ -2.21
TRM3YDL112W AEP3Q12089 606 aa1.24□□□□□ -2.21
TRM3YDL112W HUG1Q6Q5K6 68 aa1.24□□□□□ -2.21
TRM3YDL112W ODC2Q99297 307 aa1.24□□□□□ -2.21
TRM3YDL112W QCR2P07257 368 aa1.23□□□□□ -2.21
TRM3YDL112W ATP3P38077 311 aaKnown RBP1.23□□□□□ -2.21
TRM3YDL112W RIB5P38145 238 aa1.23□□□□□ -2.21
TRM3YDL112W QDR3P38227 689 aa1.23□□□□□ -2.21
TRM3YDL112W MRPL49P40858 161 aaPredicted RBP1.23□□□□□ -2.21
TRM3YDL112W ARP3P47117 449 aaKnown RBP1.23□□□□□ -2.21
TRM3YDL112W NIF3P53081 288 aa1.23□□□□□ -2.21
TRM3YDL112W FMP48P53233 369 aa1.23□□□□□ -2.21
TRM3YDL112W CPD1P53314 239 aa1.23□□□□□ -2.21
TRM3YDL112W TMA20P89886 181 aaPredicted RBP1.23□□□□□ -2.21
TRM3YDL112W RTT103Q05543 409 aa1.23□□□□□ -2.21
TRM3YDL112W PAM18Q07914 168 aa1.23□□□□□ -2.21
TRM3YDL112W SAL1D6W196 494 aa1.23□□□□□ -2.21
TRM3YDL112W YBL071CP38185 102 aa1.23□□□□□ -2.21
TRM3YDL112W RRT1P38192 103 aa1.23□□□□□ -2.21
TRM3YDL112W GDT1P38301 280 aaPredicted RBP1.23□□□□□ -2.21
TRM3YDL112W KRE9P39005 276 aa1.23□□□□□ -2.21
TRM3YDL112W BDH1P39714 382 aa1.23□□□□□ -2.21
TRM3YDL112W SPI1P40092 148 aa1.23□□□□□ -2.21
TRM3YDL112W IRC18P47056 224 aa1.23□□□□□ -2.21
TRM3YDL112W TPN1P53099 579 aa1.23□□□□□ -2.21
TRM3YDL112W YPR013CQ12145 317 aa1.23□□□□□ -2.21
TRM3YDL112W TIR4Q12218 487 aaPredicted RBP1.23□□□□□ -2.21
TRM3YDL112W YPL229WQ99395 206 aa1.23□□□□□ -2.21
TRM3YDL112W YPS1P32329 569 aa1.23□□□□□ -2.21
TRM3YDL112W ACP1P32463 125 aa1.23□□□□□ -2.21
TRM3YDL112W CSH1P38287 376 aa1.23□□□□□ -2.21
TRM3YDL112W PCL7P40186 285 aa1.23□□□□□ -2.21
TRM3YDL112W YGR018CP53211 109 aa1.23□□□□□ -2.21
TRM3YDL112W SNO1Q03144 224 aa1.23□□□□□ -2.21
TRM3YDL112W FRQ1Q06389 190 aa1.23□□□□□ -2.21
TRM3YDL112W CCW12Q12127 133 aa1.23□□□□□ -2.21
TRM3YDL112W RPS11AP0CX47 156 aaKnown RBP1.22□□□□□ -2.21
TRM3YDL112W RPS11BP0CX48 156 aaKnown RBP1.22□□□□□ -2.21
TRM3YDL112W MRP17P28778 131 aa1.22□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms