RNA–Protein interactions for RNA: YCL020W

YCL020W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YCL020W, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCL020WYCL020W YOR342CQ12182 319 aa0.77□□□□□ -2.29
YCL020WYCL020W DGK1Q12382 290 aa0.77□□□□□ -2.29
YCL020WYCL020W MPD1Q12404 318 aaKnown RBP0.77□□□□□ -2.29
YCL020WYCL020W GCY1P14065 312 aaKnown RBP RIP-Chip data0.76□□□□□ -2.29not detected
YCL020WYCL020W ATP7P30902 174 aa0.76□□□□□ -2.29
YCL020WYCL020W CAF4P36130 643 aa0.76□□□□□ -2.29
YCL020WYCL020W ECM4P36156 370 aa0.76□□□□□ -2.29
YCL020WYCL020W NSG1P38837 291 aa0.76□□□□□ -2.29
YCL020WYCL020W YNL200CP40165 246 aaKnown RBP0.76□□□□□ -2.29
YCL020WYCL020W GPI14P47088 403 aaKnown RBP0.76□□□□□ -2.29
YCL020WYCL020W GIM3P53900 129 aa0.76□□□□□ -2.29
YCL020WYCL020W AIM36Q03798 255 aa0.76□□□□□ -2.29
YCL020WYCL020W UPS3Q04006 179 aa0.76□□□□□ -2.29
YCL020WYCL020W GPI17Q04080 534 aa0.76□□□□□ -2.29
YCL020WYCL020W DAS2Q12084 232 aa0.76□□□□□ -2.29
YCL020WYCL020W ATP20Q12233 115 aa0.76□□□□□ -2.29
YCL020WYCL020W RPS24AP0CX31 135 aaKnown RBP0.75□□□□□ -2.29
YCL020WYCL020W RPS24BP0CX32 135 aaKnown RBP0.75□□□□□ -2.29
YCL020WYCL020W SEN2P16658 377 aa0.75□□□□□ -2.29
YCL020WYCL020W YKL102CP34249 101 aa0.75□□□□□ -2.29
YCL020WYCL020W SFK1P35735 353 aa0.75□□□□□ -2.29
YCL020WYCL020W NVJ1P38881 321 aa0.75□□□□□ -2.29
YCL020WYCL020W CUP9P41817 306 aa0.75□□□□□ -2.29
YCL020WYCL020W HOP2P53187 214 aa0.75□□□□□ -2.29
YCL020WYCL020W MET31Q03081 177 aa0.75□□□□□ -2.29
YCL020WYCL020W AIM34Q03673 198 aa0.75□□□□□ -2.29
YCL020WYCL020W HPT1Q04178 221 aaKnown RBP0.75□□□□□ -2.29
YCL020WYCL020W ATG38Q05789 226 aaKnown RBP0.75□□□□□ -2.29
YCL020WYCL020W YET3Q07451 203 aa0.75□□□□□ -2.29
YCL020WYCL020W YOR381W-AQ3E804 55 aa0.75□□□□□ -2.29
YCL020WYCL020W YPR014CQ6B0W2 109 aa0.75□□□□□ -2.29
YCL020WYCL020W YCR023CP25351 611 aa0.74□□□□□ -2.29
YCL020WYCL020W TRX3P25372 127 aa0.74□□□□□ -2.29
YCL020WYCL020W GSP2P32836 220 aaKnown RBP0.74□□□□□ -2.29
YCL020WYCL020W RRT1P38192 103 aa0.74□□□□□ -2.29
YCL020WYCL020W FYV4P38783 130 aaPredicted RBP0.74□□□□□ -2.29
YCL020WYCL020W EGD2P38879 174 aaKnown RBP0.74□□□□□ -2.29
YCL020WYCL020W NSA2P40078 261 aaKnown RBP0.74□□□□□ -2.29
YCL020WYCL020W MPM1P40364 252 aa0.74□□□□□ -2.29
YCL020WYCL020W POG1P40473 351 aa0.74□□□□□ -2.29
YCL020WYCL020W ALB1P47019 175 aaPredicted RBP0.74□□□□□ -2.29
YCL020WYCL020W GAL83Q04739 417 aa0.74□□□□□ -2.29
YCL020WYCL020W SHH4Q06236 168 aa0.74□□□□□ -2.29
YCL020WYCL020W CHD1P32657 1468 aa0.74□□□□□ -2.29
YCL020WYCL020W RPL35AP0CX84 120 aaKnown RBP0.73□□□□□ -2.29
YCL020WYCL020W RPL35BP0CX85 120 aaKnown RBP0.73□□□□□ -2.29
YCL020WYCL020W RAD51P25454 400 aa0.73□□□□□ -2.29
YCL020WYCL020W RFC2P40348 353 aa0.73□□□□□ -2.29
YCL020WYCL020W TTI2P47168 421 aa0.73□□□□□ -2.29
YCL020WYCL020W SOL1P50278 321 aa0.73□□□□□ -2.29
YCL020WYCL020W YIP3P53633 176 aa0.73□□□□□ -2.29
YCL020WYCL020W BRX1Q08235 291 aaKnown RBP0.73□□□□□ -2.29
YCL020WYCL020W GRE1Q08969 168 aa0.73□□□□□ -2.29
YCL020WYCL020W YLR050CQ12155 161 aaKnown RBP0.73□□□□□ -2.29
YCL020WYCL020W YOR015WQ12169 119 aa0.73□□□□□ -2.29
YCL020WYCL020W TAR1Q8TGM6 124 aa0.73□□□□□ -2.29
YCL020WYCL020W MAK31P23059 88 aa0.72□□□□□ -2.29
YCL020WYCL020W SEC14P24280 304 aaKnown RBP0.72□□□□□ -2.29
YCL020WYCL020W UBC8P28263 218 aa0.72□□□□□ -2.29
YCL020WYCL020W TRR1P29509 319 aaKnown RBP0.72□□□□□ -2.29
YCL020WYCL020W CPR5P35176 225 aa0.72□□□□□ -2.29
YCL020WYCL020W YBR242WP38331 238 aa0.72□□□□□ -2.29
YCL020WYCL020W SEC72P39742 193 aaKnown RBP0.72□□□□□ -2.29
YCL020WYCL020W NSE4P43124 402 aa0.72□□□□□ -2.29
YCL020WYCL020W YNL140CP53910 189 aa0.72□□□□□ -2.29
YCL020WYCL020W DML1Q03652 475 aa0.72□□□□□ -2.29
YCL020WYCL020W RRP17Q04031 235 aaPredicted RBP0.72□□□□□ -2.29
YCL020WYCL020W YHP1Q04116 353 aa0.72□□□□□ -2.29
YCL020WYCL020W YDR391CQ04170 232 aa0.72□□□□□ -2.29
YCL020WYCL020W UPS1Q05776 175 aa0.72□□□□□ -2.29
YCL020WYCL020W YPR127WQ06494 345 aa0.72□□□□□ -2.29
YCL020WYCL020W YPR203WQ08994 102 aa0.72□□□□□ -2.29
YCL020WYCL020W STP22P25604 385 aa0.71□□□□□ -2.3
YCL020WYCL020W YRA2P36036 203 aaKnown RBP RIP-Chip data0.71□□□□□ -2.3not detected
YCL020WYCL020W ETR1P38071 380 aa0.71□□□□□ -2.3
YCL020WYCL020W PAC10P48363 199 aa0.71□□□□□ -2.3
YCL020WYCL020W SBH1P52870 82 aa0.71□□□□□ -2.3
YCL020WYCL020W HSK3P69852 69 aa0.71□□□□□ -2.3
YCL020WYCL020W STF2P16965 84 aa0.7□□□□□ -2.3
YCL020WYCL020W YBL010CP32788 280 aa0.7□□□□□ -2.3
YCL020WYCL020W NUF2P33895 451 aa0.7□□□□□ -2.3
YCL020WYCL020W MRPL15P36523 253 aa0.7□□□□□ -2.3
YCL020WYCL020W XPT1P47165 209 aa0.7□□□□□ -2.3
YCL020WYCL020W YGL235WP53071 178 aa0.7□□□□□ -2.3
YCL020WYCL020W GIM5Q04493 163 aa0.7□□□□□ -2.3
YCL020WYCL020W ELP6Q04868 273 aa0.7□□□□□ -2.3
YCL020WYCL020W LCL2Q08045 131 aa0.7□□□□□ -2.3
YCL020WYCL020W ATG41Q12048 136 aa0.7□□□□□ -2.3
YCL020WYCL020W HSP30P25619 332 aa0.69□□□□□ -2.3
YCL020WYCL020W CSH1P38287 376 aa0.69□□□□□ -2.3
YCL020WYCL020W SRP14P38985 146 aa0.69□□□□□ -2.3
YCL020WYCL020W CCS1P40202 249 aaKnown RBP0.69□□□□□ -2.3
YCL020WYCL020W YFL051CP43552 160 aa0.69□□□□□ -2.3
YCL020WYCL020W YKR005CQ02203 525 aa0.69□□□□□ -2.3
YCL020WYCL020W PIR1Q03178 341 aa0.69□□□□□ -2.3
YCL020WYCL020W RIM9Q04734 239 aa0.69□□□□□ -2.3
YCL020WYCL020W YOR214CQ12282 236 aa0.69□□□□□ -2.3
YCL020WYCL020W YHL037CP38733 133 aa0.68□□□□□ -2.3
YCL020WYCL020W YEL073CP39974 107 aa0.68□□□□□ -2.3
YCL020WYCL020W YER121WP40076 114 aa0.68□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms