RNA–Protein interactions for RNA: YBR260C

RGD1, Transcript of GTPase-activating protein (RhoGAP) for Rho3p and Rho4p, yeastyeast

Gene RGD1, Length 2,001 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGD1YBR260C YCH1P42937 148 aa5.28□□□□□ -1.56
RGD1YBR260C CRH1P53301 507 aa5.28□□□□□ -1.56
RGD1YBR260C TUB4P53378 473 aa5.28□□□□□ -1.56
RGD1YBR260C YPL039WQ03080 316 aa5.28□□□□□ -1.56
RGD1YBR260C POC4Q12245 148 aaPredicted RBP5.28□□□□□ -1.56
RGD1YBR260C YIL102C-AQ2V2P5 75 aa5.28□□□□□ -1.56
RGD1YBR260C YBL112CQ3E7Y4 105 aa5.28□□□□□ -1.56
RGD1YBR260C YLR358CO13565 187 aa5.27□□□□□ -1.57
RGD1YBR260C SOD1P00445 154 aaKnown RBP5.27□□□□□ -1.57
RGD1YBR260C GEX1P25596 615 aa5.27□□□□□ -1.57
RGD1YBR260C YBR090CP38253 122 aa5.27□□□□□ -1.57
RGD1YBR260C YBR184WP38299 523 aa5.27□□□□□ -1.57
RGD1YBR260C LCL3P53153 274 aa5.27□□□□□ -1.57
RGD1YBR260C OGG1P53397 376 aaPredicted RBP5.27□□□□□ -1.57
RGD1YBR260C LPP1Q04396 274 aa5.27□□□□□ -1.57
RGD1YBR260C CUP2P15315 225 aa5.26□□□□□ -1.57
RGD1YBR260C ZRT1P32804 376 aa5.26□□□□□ -1.57
RGD1YBR260C SRP14P38985 146 aa5.26□□□□□ -1.57
RGD1YBR260C DUO1P53168 247 aaKnown RBP5.26□□□□□ -1.57
RGD1YBR260C MCP1Q12106 302 aa5.26□□□□□ -1.57
RGD1YBR260C USV1Q12132 391 aa5.26□□□□□ -1.57
RGD1YBR260C INH1P01097 85 aa5.26□□□□□ -1.57
RGD1YBR260C CTA1P15202 515 aa5.26□□□□□ -1.57
RGD1YBR260C YCR023CP25351 611 aa5.26□□□□□ -1.57
RGD1YBR260C YKL071WP36086 256 aa5.26□□□□□ -1.57
RGD1YBR260C YER121WP40076 114 aa5.26□□□□□ -1.57
RGD1YBR260C YIL161WP40449 235 aaKnown RBP5.26□□□□□ -1.57
RGD1YBR260C GPI2P46961 280 aa5.26□□□□□ -1.57
RGD1YBR260C YIP5P53108 310 aa5.26□□□□□ -1.57
RGD1YBR260C YNR040WP53736 256 aa5.26□□□□□ -1.57
RGD1YBR260C ERG13P54839 491 aaKnown RBP5.26□□□□□ -1.57
RGD1YBR260C RIM9Q04734 239 aa5.26□□□□□ -1.57
RGD1YBR260C YDR344CQ05510 147 aa5.26□□□□□ -1.57
RGD1YBR260C GRE1Q08969 168 aa5.26□□□□□ -1.57
RGD1YBR260C YIR021W-AQ3E739 70 aa5.26□□□□□ -1.57
RGD1YBR260C VAR1P02381 398 aa5.25□□□□□ -1.57
RGD1YBR260C YKR104WP0CE69 306 aa5.25□□□□□ -1.57
RGD1YBR260C DOG2P38773 246 aa5.25□□□□□ -1.57
RGD1YBR260C FYV4P38783 130 aaPredicted RBP5.25□□□□□ -1.57
RGD1YBR260C SWT21P53873 357 aaPredicted RBP5.25□□□□□ -1.57
RGD1YBR260C WSC3Q12215 556 aa5.25□□□□□ -1.57
RGD1YBR260C SMT3Q12306 101 aaKnown RBP5.25□□□□□ -1.57
RGD1YBR260C YER190C-BP0CX94 160 aa5.24□□□□□ -1.57
RGD1YBR260C YEL077W-AP0CX95 160 aa5.24□□□□□ -1.57
RGD1YBR260C YGR296C-BP0CX96 160 aa5.24□□□□□ -1.57
RGD1YBR260C YPL283W-BP0CX97 160 aa5.24□□□□□ -1.57
RGD1YBR260C YPR204C-AP0CX98 160 aa5.24□□□□□ -1.57
RGD1YBR260C NPR1P22211 790 aa5.24□□□□□ -1.57
RGD1YBR260C ATX1P38636 73 aa5.24□□□□□ -1.57
RGD1YBR260C YHL026CP38740 315 aa5.24□□□□□ -1.57
RGD1YBR260C ECM14P38836 430 aa5.24□□□□□ -1.57
RGD1YBR260C YNL200CP40165 246 aaKnown RBP5.24□□□□□ -1.57
RGD1YBR260C ATG4P53867 494 aa5.24□□□□□ -1.57
RGD1YBR260C YMR007WQ03675 126 aa5.24□□□□□ -1.57
RGD1YBR260C OPI3P05375 206 aa5.24□□□□□ -1.57
RGD1YBR260C YGP1P38616 354 aaKnown RBP5.24□□□□□ -1.57
RGD1YBR260C TDA4P47153 279 aa5.24□□□□□ -1.57
RGD1YBR260C PET191Q02772 108 aa5.24□□□□□ -1.57
RGD1YBR260C RPL7AP05737 244 aaKnown RBP5.23□□□□□ -1.57
RGD1YBR260C FCY2P17064 533 aa5.23□□□□□ -1.57
RGD1YBR260C ARF2P19146 181 aaKnown RBP5.23□□□□□ -1.57
RGD1YBR260C IMG2P25642 146 aaPredicted RBP5.23□□□□□ -1.57
RGD1YBR260C DFG10P40526 253 aa5.23□□□□□ -1.57
RGD1YBR260C OST2P46964 130 aa5.23□□□□□ -1.57
RGD1YBR260C YNR021WP53723 404 aaKnown RBP5.23□□□□□ -1.57
RGD1YBR260C YNR071CP53757 342 aa5.23□□□□□ -1.57
RGD1YBR260C RPS22BQ3E7Y3 130 aaKnown RBP5.23□□□□□ -1.57
RGD1YBR260C RPS22AP0C0W1 130 aaKnown RBP5.23□□□□□ -1.57
RGD1YBR260C POX1P13711 748 aa5.23□□□□□ -1.57
RGD1YBR260C COX10P21592 462 aa5.23□□□□□ -1.57
RGD1YBR260C PAD1P33751 242 aaKnown RBP RIP-Chip data5.23□□□□□ -1.57not detected
RGD1YBR260C MCH2P36032 473 aa5.23□□□□□ -1.57
RGD1YBR260C YGR269WP40326 108 aa5.23□□□□□ -1.57
RGD1YBR260C SAS2P40963 338 aa5.23□□□□□ -1.57
RGD1YBR260C YLR460CP54007 376 aa5.23□□□□□ -1.57
RGD1YBR260C VPS71Q03433 280 aa5.23□□□□□ -1.57
RGD1YBR260C MRPL1Q04599 285 aa5.23□□□□□ -1.57
RGD1YBR260C AIM7Q12156 149 aa5.23□□□□□ -1.57
RGD1YBR260C RPL1AP0CX43 217 aaKnown RBP5.22□□□□□ -1.57
RGD1YBR260C RPL1BP0CX44 217 aaKnown RBP5.22□□□□□ -1.57
RGD1YBR260C REC114P32841 428 aa5.22□□□□□ -1.57
RGD1YBR260C NUP53Q03790 475 aa5.22□□□□□ -1.57
RGD1YBR260C DPP1Q05521 289 aa5.22□□□□□ -1.57
RGD1YBR260C DIC1Q06143 298 aa5.22□□□□□ -1.57
RGD1YBR260C YDR157WA0A023PZE8 133 aa5.21□□□□□ -1.57
RGD1YBR260C MRS1P07266 363 aa5.21□□□□□ -1.57
RGD1YBR260C ERV1P27882 189 aa5.21□□□□□ -1.57
RGD1YBR260C GAR1P28007 205 aaKnown RBP5.21□□□□□ -1.57
RGD1YBR260C YBL059WP34224 193 aa5.21□□□□□ -1.57
RGD1YBR260C WSC4P38739 605 aa5.21□□□□□ -1.57
RGD1YBR260C ANS1P38832 159 aa5.21□□□□□ -1.57
RGD1YBR260C YJL213WP40896 331 aa5.21□□□□□ -1.57
RGD1YBR260C YML079WQ03629 201 aa5.21□□□□□ -1.57
RGD1YBR260C MCH4Q08268 501 aa5.21□□□□□ -1.57
RGD1YBR260C YPL264CQ08980 353 aa5.21□□□□□ -1.57
RGD1YBR260C JID1Q12350 301 aa5.21□□□□□ -1.57
RGD1YBR260C ATG40Q99325 256 aa5.21□□□□□ -1.57
RGD1YBR260C RPB8P20436 146 aa5.21□□□□□ -1.58
RGD1YBR260C YAR068WP39564 161 aa5.21□□□□□ -1.58
RGD1YBR260C YNL208WP40159 199 aaKnown RBP5.21□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms