RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W ANT1Q06497 328 aa1.36□□□□□ -2.19
SNC1YAL030W YLR046CQ12253 270 aa1.36□□□□□ -2.19
SNC1YAL030W BOL1Q3E793 110 aa1.36□□□□□ -2.19
SNC1YAL030W UBR2Q07963 1872 aa1.35□□□□□ -2.19
SNC1YAL030W NSP1P14907 823 aaKnown RBP1.35□□□□□ -2.19
SNC1YAL030W SEC11P15367 167 aa1.35□□□□□ -2.19
SNC1YAL030W IDP1P21954 428 aaKnown RBP1.35□□□□□ -2.19
SNC1YAL030W BUB2P26448 306 aaPredicted RBP1.35□□□□□ -2.19
SNC1YAL030W TMA19P35691 167 aaKnown RBP1.35□□□□□ -2.19
SNC1YAL030W SRP102P36057 244 aaPredicted RBP1.35□□□□□ -2.19
SNC1YAL030W NRG2P38082 220 aa1.35□□□□□ -2.19
SNC1YAL030W FYV4P38783 130 aaPredicted RBP1.35□□□□□ -2.19
SNC1YAL030W AYR1P40471 297 aa1.35□□□□□ -2.19
SNC1YAL030W SBH2P52871 88 aa1.35□□□□□ -2.19
SNC1YAL030W YGL101WP53144 215 aa1.35□□□□□ -2.19
SNC1YAL030W TIM13P53299 105 aa1.35□□□□□ -2.19
SNC1YAL030W BUD25P85052 153 aa1.35□□□□□ -2.19
SNC1YAL030W SML1Q04964 104 aa1.35□□□□□ -2.19
SNC1YAL030W IRC23Q08416 157 aa1.35□□□□□ -2.19
SNC1YAL030W ATP20Q12233 115 aa1.35□□□□□ -2.19
SNC1YAL030W YOR214CQ12282 236 aa1.35□□□□□ -2.19
SNC1YAL030W RPS28BP0C0X0 67 aaKnown RBP1.34□□□□□ -2.19
SNC1YAL030W UBI4P0CG63 381 aaKnown RBP1.34□□□□□ -2.19
SNC1YAL030W PBI2P0CT04 75 aaKnown RBP1.34□□□□□ -2.19
SNC1YAL030W PAM17P36147 197 aa1.34□□□□□ -2.19
SNC1YAL030W VMA22P38784 181 aa1.34□□□□□ -2.19
SNC1YAL030W PEP8P40335 379 aa1.34□□□□□ -2.19
SNC1YAL030W DLS1P40366 167 aa1.34□□□□□ -2.19
SNC1YAL030W APQ12P40532 138 aa1.34□□□□□ -2.19
SNC1YAL030W KNH1P50112 268 aa1.34□□□□□ -2.19
SNC1YAL030W NQM1P53228 333 aaPredicted RBP1.34□□□□□ -2.19
SNC1YAL030W YNL033WP53964 284 aa1.34□□□□□ -2.19
SNC1YAL030W DAD4P69851 72 aa1.34□□□□□ -2.19
SNC1YAL030W YKR005CQ02203 525 aa1.34□□□□□ -2.19
SNC1YAL030W VPS28Q02767 242 aa1.34□□□□□ -2.19
SNC1YAL030W GRX5Q02784 150 aa1.34□□□□□ -2.19
SNC1YAL030W YDC1Q02896 317 aa1.34□□□□□ -2.19
SNC1YAL030W GAL83Q04739 417 aa1.34□□□□□ -2.19
SNC1YAL030W YMR253CQ04835 414 aa1.34□□□□□ -2.19
SNC1YAL030W RPS28AQ3E7X9 67 aaPredicted RBP1.34□□□□□ -2.19
SNC1YAL030W UBR1P19812 1950 aa1.34□□□□□ -2.2
SNC1YAL030W TAF2P23255 1407 aa1.33□□□□□ -2.2
SNC1YAL030W YOR1P53049 1477 aa1.33□□□□□ -2.2
SNC1YAL030W STP22P25604 385 aa1.33□□□□□ -2.2
SNC1YAL030W HSP30P25619 332 aa1.33□□□□□ -2.2
SNC1YAL030W CSH1P38287 376 aa1.33□□□□□ -2.2
SNC1YAL030W YBR220CP38318 560 aa1.33□□□□□ -2.2
SNC1YAL030W TVP23P38962 199 aa1.33□□□□□ -2.2
SNC1YAL030W ORM1P53224 222 aa1.33□□□□□ -2.2
SNC1YAL030W DIG2Q03373 323 aaKnown RBP1.33□□□□□ -2.2
SNC1YAL030W RRP17Q04031 235 aaPredicted RBP1.33□□□□□ -2.2
SNC1YAL030W YPD1Q07688 167 aa1.33□□□□□ -2.2
SNC1YAL030W RAD28Q12021 506 aa1.33□□□□□ -2.2
SNC1YAL030W RAD6P06104 172 aa1.32□□□□□ -2.2
SNC1YAL030W ATP5P09457 212 aa1.32□□□□□ -2.2
SNC1YAL030W RPL2AP0CX45 254 aaKnown RBP1.32□□□□□ -2.2
SNC1YAL030W RPL2BP0CX46 254 aaKnown RBP1.32□□□□□ -2.2
SNC1YAL030W RPL30P14120 105 aaKnown RBP1.32□□□□□ -2.2
SNC1YAL030W UBC8P28263 218 aa1.32□□□□□ -2.2
SNC1YAL030W SFK1P35735 353 aa1.32□□□□□ -2.2
SNC1YAL030W YRA2P36036 203 aaKnown RBP RIP-Chip data1.32□□□□□ -2.2not detected
SNC1YAL030W RRT1P38192 103 aa1.32□□□□□ -2.2
SNC1YAL030W IPI1P38803 334 aaPredicted RBP1.32□□□□□ -2.2
SNC1YAL030W IGO1P53897 168 aa1.32□□□□□ -2.2
SNC1YAL030W PKR1Q03880 122 aaKnown RBP1.32□□□□□ -2.2
SNC1YAL030W RNH202Q05635 350 aa1.32□□□□□ -2.2
SNC1YAL030W YPR174CQ06616 221 aaPredicted RBP1.32□□□□□ -2.2
SNC1YAL030W PRP11Q07350 266 aaPredicted RBP1.32□□□□□ -2.2
SNC1YAL030W YPR202WQ08993 238 aa1.32□□□□□ -2.2
SNC1YAL030W YOR015WQ12169 119 aa1.32□□□□□ -2.2
SNC1YAL030W YOR381W-AQ3E804 55 aa1.32□□□□□ -2.2
SNC1YAL030W TRM3Q07527 1436 aa1.32□□□□□ -2.2
SNC1YAL030W PET54P10834 293 aa1.31□□□□□ -2.2
SNC1YAL030W PEX34P25584 144 aa1.31□□□□□ -2.2
SNC1YAL030W YHL018WP38744 120 aaPredicted RBP1.31□□□□□ -2.2
SNC1YAL030W PAC10P48363 199 aa1.31□□□□□ -2.2
SNC1YAL030W SBH1P52870 82 aa1.31□□□□□ -2.2
SNC1YAL030W THG1P53215 237 aaKnown RBP1.31□□□□□ -2.2
SNC1YAL030W RAV2Q03956 351 aa1.31□□□□□ -2.2
SNC1YAL030W SYM1Q06563 197 aa1.31□□□□□ -2.2
SNC1YAL030W YPR013CQ12145 317 aa1.31□□□□□ -2.2
SNC1YAL030W YHR086W-AQ3E746 53 aa1.31□□□□□ -2.2
SNC1YAL030W MDM35O60200 86 aa1.3□□□□□ -2.2
SNC1YAL030W MAK31P23059 88 aa1.3□□□□□ -2.2
SNC1YAL030W ACP1P32463 125 aa1.3□□□□□ -2.2
SNC1YAL030W GSP2P32836 220 aaKnown RBP1.3□□□□□ -2.2
SNC1YAL030W CPR5P35176 225 aa1.3□□□□□ -2.2
SNC1YAL030W YEL073CP39974 107 aa1.3□□□□□ -2.2
SNC1YAL030W YER135CP40082 130 aa1.3□□□□□ -2.2
SNC1YAL030W YER181CP40097 107 aa1.3□□□□□ -2.2
SNC1YAL030W SOK1P40317 901 aa1.3□□□□□ -2.2
SNC1YAL030W NSE4P43124 402 aa1.3□□□□□ -2.2
SNC1YAL030W HHT1P61830 136 aa1.3□□□□□ -2.2
SNC1YAL030W DML1Q03652 475 aa1.3□□□□□ -2.2
SNC1YAL030W YLR162WQ06235 118 aa1.3□□□□□ -2.2
SNC1YAL030W FYV12Q08559 129 aa1.3□□□□□ -2.2
SNC1YAL030W COX8P04039 78 aa1.29□□□□□ -2.2
SNC1YAL030W PTC1P35182 281 aa1.29□□□□□ -2.2
SNC1YAL030W YEL028WP39989 153 aa1.29□□□□□ -2.2
SNC1YAL030W YPL073CP40323 161 aa1.29□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 105.7 ms