RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 PAPLNO95428 1278 aa12.11□□□□□ -0.47
ERCC8-208ENST00000497892 CYP11A1P05108 521 aa12.11□□□□□ -0.47
ERCC8-208ENST00000497892 TNNI1P19237 187 aa12.11□□□□□ -0.47
ERCC8-208ENST00000497892 BMP6P22004 513 aa12.11□□□□□ -0.47
ERCC8-208ENST00000497892 RPL13P26373 211 aaKnown RBP12.11□□□□□ -0.47
ERCC8-208ENST00000497892 PPP1R2P41236 205 aa12.11□□□□□ -0.47
ERCC8-208ENST00000497892 RBP5P82980 135 aa12.11□□□□□ -0.47
ERCC8-208ENST00000497892 ROR1Q01973 937 aa12.11□□□□□ -0.47
ERCC8-208ENST00000497892 LRRC63Q05C16 580 aa12.11□□□□□ -0.47
ERCC8-208ENST00000497892 CBX2Q14781 532 aaPredicted RBP12.11□□□□□ -0.47
ERCC8-208ENST00000497892 CTXN3Q4LDR2 81 aa12.11□□□□□ -0.47
ERCC8-208ENST00000497892 CEP135Q66GS9 1140 aa12.11□□□□□ -0.47
ERCC8-208ENST00000497892 SCARA3Q6AZY7 606 aa12.11□□□□□ -0.47
ERCC8-208ENST00000497892 TRAPPC11Q7Z392 1133 aa12.11□□□□□ -0.47
ERCC8-208ENST00000497892 CSGALNACT2Q8N6G5 542 aa12.11□□□□□ -0.47
ERCC8-208ENST00000497892 KREMEN2Q8NCW0 462 aa12.11□□□□□ -0.47
ERCC8-208ENST00000497892 CMASQ8NFW8 434 aaPredicted RBP12.11□□□□□ -0.47
ERCC8-208ENST00000497892 PARD3BQ8TEW8 1205 aa12.11□□□□□ -0.47
ERCC8-208ENST00000497892 BORCS6Q96GS4 357 aa12.11□□□□□ -0.47
ERCC8-208ENST00000497892 POP1Q99575 1024 aaKnown RBP12.11□□□□□ -0.47
ERCC8-208ENST00000497892 OXCT2Q9BYC2 517 aaPredicted RBP12.11□□□□□ -0.47
ERCC8-208ENST00000497892 FBXL5Q9UKA1 691 aa12.11□□□□□ -0.47
ERCC8-208ENST00000497892 AGAP1Q9UPQ3 857 aa12.11□□□□□ -0.47
ERCC8-208ENST00000497892 FRMD4BQ9Y2L6 1034 aa12.11□□□□□ -0.47
ERCC8-208ENST00000497892 TIMM13Q9Y5L4 95 aaPredicted RBP12.11□□□□□ -0.47
ERCC8-208ENST00000497892 ADGRG1Q9Y653 693 aa12.11□□□□□ -0.47
ERCC8-208ENST00000497892 WDR27A2RRH5 827 aa12.1□□□□□ -0.47
ERCC8-208ENST00000497892 LRRIQ3A6PVS8 624 aaPredicted RBP12.1□□□□□ -0.47
ERCC8-208ENST00000497892 PSMA7O14818 248 aa12.1□□□□□ -0.47
ERCC8-208ENST00000497892 KRT19P08727 400 aa12.1□□□□□ -0.47
ERCC8-208ENST00000497892 SPATA31D3P0C874 917 aa12.1□□□□□ -0.47
ERCC8-208ENST00000497892 AP3M2P53677 418 aa12.1□□□□□ -0.47
ERCC8-208ENST00000497892 BFSP1Q12934 665 aa12.1□□□□□ -0.47
ERCC8-208ENST00000497892 STIM1Q13586 685 aa12.1□□□□□ -0.47
ERCC8-208ENST00000497892 CAMK4Q16566 473 aa12.1□□□□□ -0.47
ERCC8-208ENST00000497892 RARS2Q5T160 578 aaKnown RBP12.1□□□□□ -0.47
ERCC8-208ENST00000497892 ISM2Q6H9L7 571 aa12.1□□□□□ -0.47
ERCC8-208ENST00000497892 OVOS1Q6IE37 1185 aa12.1□□□□□ -0.47
ERCC8-208ENST00000497892 CES5AQ6NT32 575 aa12.1□□□□□ -0.47
ERCC8-208ENST00000497892 C15orf39Q6ZRI6 1047 aa12.1□□□□□ -0.47
ERCC8-208ENST00000497892 SPATA31D4Q6ZUB0 917 aa12.1□□□□□ -0.47
ERCC8-208ENST00000497892 USP37Q86T82 979 aa12.1□□□□□ -0.47
ERCC8-208ENST00000497892 ZC3H3Q8IXZ2 948 aaKnown RBP12.1□□□□□ -0.47
ERCC8-208ENST00000497892 C12orf76Q8N812 135 aaPredicted RBP12.1□□□□□ -0.47
ERCC8-208ENST00000497892 TRIML1Q8N9V2 468 aa12.1□□□□□ -0.47
ERCC8-208ENST00000497892 DHTKD1Q96HY7 919 aaPredicted RBP12.1□□□□□ -0.47
ERCC8-208ENST00000497892 TSG101Q99816 390 aa12.1□□□□□ -0.47
ERCC8-208ENST00000497892 APOL5Q9BWW9 433 aa12.1□□□□□ -0.47
ERCC8-208ENST00000497892 COL25A1Q9BXS0 654 aaPredicted RBP12.1□□□□□ -0.47
ERCC8-208ENST00000497892 RHOBTB2Q9BYZ6 727 aa12.1□□□□□ -0.47
ERCC8-208ENST00000497892 CLSTN2Q9H4D0 955 aa12.1□□□□□ -0.47
ERCC8-208ENST00000497892 ZDHHC7Q9NXF8 308 aa12.1□□□□□ -0.47
ERCC8-208ENST00000497892 GDAP2Q9NXN4 497 aa12.1□□□□□ -0.47
ERCC8-208ENST00000497892 PRKAG3Q9UGI9 489 aa12.1□□□□□ -0.47
ERCC8-208ENST00000497892 CDH22Q9UJ99 828 aa12.1□□□□□ -0.47
ERCC8-208ENST00000497892 DSEQ9UL01 958 aa12.1□□□□□ -0.47
ERCC8-208ENST00000497892 OR6C75A6NL08 312 aa12.09□□□□□ -0.47
ERCC8-208ENST00000497892 GOLGA6L22H0YM25 854 aa12.09□□□□□ -0.47
ERCC8-208ENST00000497892 BIN1O00499 593 aa12.09□□□□□ -0.47
ERCC8-208ENST00000497892 CYB561D2O14569 222 aa12.09□□□□□ -0.47
ERCC8-208ENST00000497892 RFPL2O75678 378 aa12.09□□□□□ -0.47
ERCC8-208ENST00000497892 ZMYND10O75800 440 aa12.09□□□□□ -0.47
ERCC8-208ENST00000497892 ABLIM3O94929 683 aa12.09□□□□□ -0.47
ERCC8-208ENST00000497892 PSMC2P35998 433 aaKnown RBP12.09□□□□□ -0.47
ERCC8-208ENST00000497892 PMS1P54277 932 aaKnown RBP12.09□□□□□ -0.47
ERCC8-208ENST00000497892 DLG4P78352 724 aa12.09□□□□□ -0.47
ERCC8-208ENST00000497892 ZP2Q05996 745 aa12.09□□□□□ -0.47
ERCC8-208ENST00000497892 ENPEPQ07075 957 aa12.09□□□□□ -0.47
ERCC8-208ENST00000497892 MYO1EQ12965 1108 aa12.09□□□□□ -0.47
ERCC8-208ENST00000497892 ADAM9Q13443 819 aa12.09□□□□□ -0.47
ERCC8-208ENST00000497892 LIN9Q5TKA1 542 aa12.09□□□□□ -0.47
ERCC8-208ENST00000497892 FOXR2Q6PJQ5 311 aa12.09□□□□□ -0.47
ERCC8-208ENST00000497892 TMC5Q6UXY8 1006 aa12.09□□□□□ -0.47
ERCC8-208ENST00000497892 CYP26C1Q6V0L0 522 aa12.09□□□□□ -0.47
ERCC8-208ENST00000497892 INTS8Q75QN2 995 aaKnown RBP12.09□□□□□ -0.47
ERCC8-208ENST00000497892 GPR149Q86SP6 731 aa12.09□□□□□ -0.47
ERCC8-208ENST00000497892 FAM186BQ8IYM0 893 aa12.09□□□□□ -0.47
ERCC8-208ENST00000497892 ZNF461Q8TAF7 563 aa12.09□□□□□ -0.47
ERCC8-208ENST00000497892 FEZF2Q8TBJ5 459 aa12.09□□□□□ -0.47
ERCC8-208ENST00000497892 HPDLQ96IR7 371 aa12.09□□□□□ -0.47
ERCC8-208ENST00000497892 RIPOR3Q96MK2 946 aa12.09□□□□□ -0.47
ERCC8-208ENST00000497892 NECTIN4Q96NY8 510 aa12.09□□□□□ -0.47
ERCC8-208ENST00000497892 NECAB3Q96P71 396 aaPredicted RBP12.09□□□□□ -0.47
ERCC8-208ENST00000497892 UHRF1Q96T88 793 aaPredicted RBP12.09□□□□□ -0.47
ERCC8-208ENST00000497892 MKNK1Q9BUB5 465 aa12.09□□□□□ -0.47
ERCC8-208ENST00000497892 TRIM49BA6NDI0 452 aa12.08□□□□□ -0.48
ERCC8-208ENST00000497892 IKBKBO14920 756 aa12.08□□□□□ -0.48
ERCC8-208ENST00000497892 CETN3O15182 167 aa12.08□□□□□ -0.48
ERCC8-208ENST00000497892 SLC16A3O15427 465 aaKnown RBP12.08□□□□□ -0.48
ERCC8-208ENST00000497892 STAU1O95793 577 aaKnown RBP12.08□□□□□ -0.48
ERCC8-208ENST00000497892 C8AP07357 584 aa12.08□□□□□ -0.48
ERCC8-208ENST00000497892 CPB1P15086 417 aa12.08□□□□□ -0.48
ERCC8-208ENST00000497892 ATF2P15336 505 aa12.08□□□□□ -0.48
ERCC8-208ENST00000497892 CCNE1P24864 410 aa12.08□□□□□ -0.48
ERCC8-208ENST00000497892 HOXA9P31269 272 aa12.08□□□□□ -0.48
ERCC8-208ENST00000497892 MTHFRP42898 656 aa12.08□□□□□ -0.48
ERCC8-208ENST00000497892 VAMP7P51809 220 aa12.08□□□□□ -0.48
ERCC8-208ENST00000497892 MCCD1P59942 119 aaPredicted RBP12.08□□□□□ -0.48
ERCC8-208ENST00000497892 ZACNQ401N2 412 aa12.08□□□□□ -0.48
ERCC8-208ENST00000497892 C1orf220Q5T0J3 134 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms