RNA–Protein interactions for RNA: YPL018W

CTF19, Transcript of Outer kinetochore protein, needed for accurate chromosome segregation, yeastyeast

Gene CTF19, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF19YPL018W YLR224WQ05947 369 aa5.36□□□□□ -1.55
CTF19YPL018W SOR2Q07786 357 aa5.36□□□□□ -1.55
CTF19YPL018W YCT1Q12235 531 aa5.36□□□□□ -1.55
CTF19YPL018W YLR122CQ12312 125 aa5.36□□□□□ -1.55
CTF19YPL018W YOS1Q3E834 85 aa5.36□□□□□ -1.55
CTF19YPL018W CKS1P20486 150 aaKnown RBP5.35□□□□□ -1.55
CTF19YPL018W YCR061WP25639 631 aa5.35□□□□□ -1.55
CTF19YPL018W ERG2P32352 222 aa5.35□□□□□ -1.55
CTF19YPL018W YPC1P38298 316 aa5.35□□□□□ -1.55
CTF19YPL018W LSM12P38828 187 aaKnown RBP5.35□□□□□ -1.55
CTF19YPL018W LSM4P40070 187 aaKnown RBP5.35□□□□□ -1.55
CTF19YPL018W SWM2P40342 146 aa5.35□□□□□ -1.55
CTF19YPL018W COX16P47081 118 aa5.35□□□□□ -1.55
CTF19YPL018W YGL114WP53134 725 aa5.35□□□□□ -1.55
CTF19YPL018W YPD1Q07688 167 aa5.35□□□□□ -1.55
CTF19YPL018W PAM18Q07914 168 aa5.35□□□□□ -1.55
CTF19YPL018W YJR112W-AQ3E743 109 aa5.35□□□□□ -1.55
CTF19YPL018W RPL13BP40212 199 aaKnown RBP5.34□□□□□ -1.55
CTF19YPL018W YFL015CP43578 164 aa5.34□□□□□ -1.55
CTF19YPL018W ECM27P47144 725 aa5.34□□□□□ -1.55
CTF19YPL018W GLO1P50107 326 aa5.34□□□□□ -1.55
CTF19YPL018W YDR415CQ04033 374 aaPredicted RBP5.34□□□□□ -1.55
CTF19YPL018W YDL086WQ07505 273 aa5.34□□□□□ -1.55
CTF19YPL018W RRT7Q07829 113 aa5.34□□□□□ -1.55
CTF19YPL018W HRD1Q08109 551 aa5.34□□□□□ -1.55
CTF19YPL018W RPL13AQ12690 199 aaPredicted RBP5.34□□□□□ -1.55
CTF19YPL018W YLR146W-AQ2V2P1 62 aa5.34□□□□□ -1.55
CTF19YPL018W ROX3P25046 220 aa5.33□□□□□ -1.56
CTF19YPL018W SIP1P32578 815 aa5.33□□□□□ -1.56
CTF19YPL018W VMA11P32842 164 aa5.33□□□□□ -1.56
CTF19YPL018W PDC2P32896 925 aa5.33□□□□□ -1.56
CTF19YPL018W MRPL4P36517 319 aa5.33□□□□□ -1.56
CTF19YPL018W YHR138CP38841 114 aaPredicted RBP5.33□□□□□ -1.56
CTF19YPL018W YFL054CP43549 646 aa5.33□□□□□ -1.56
CTF19YPL018W YJR012CP47087 207 aa5.33□□□□□ -1.56
CTF19YPL018W PKP2P53170 491 aa5.33□□□□□ -1.56
CTF19YPL018W JAC1P53193 184 aa5.33□□□□□ -1.56
CTF19YPL018W GPI15P53961 229 aa5.33□□□□□ -1.56
CTF19YPL018W DID2P69771 204 aa5.33□□□□□ -1.56
CTF19YPL018W YNG1Q08465 219 aa5.33□□□□□ -1.56
CTF19YPL018W YGL194C-AQ2V2P6 80 aa5.33□□□□□ -1.56
CTF19YPL018W RPL9AP05738 191 aaKnown RBP5.32□□□□□ -1.56
CTF19YPL018W CDS1P38221 457 aa5.32□□□□□ -1.56
CTF19YPL018W SEC72P39742 193 aaKnown RBP5.32□□□□□ -1.56
CTF19YPL018W CIN5P40917 295 aa5.32□□□□□ -1.56
CTF19YPL018W YJR111CP47148 283 aaKnown RBP5.32□□□□□ -1.56
CTF19YPL018W RPL9BP51401 191 aaKnown RBP5.32□□□□□ -1.56
CTF19YPL018W YGL185CP53100 379 aa5.32□□□□□ -1.56
CTF19YPL018W YGL117WP53133 265 aa5.32□□□□□ -1.56
CTF19YPL018W DIA1P54005 336 aa5.32□□□□□ -1.56
CTF19YPL018W ATG5Q12380 294 aa5.32□□□□□ -1.56
CTF19YPL018W DFR1P07807 211 aaKnown RBP RIP-Chip data5.31□□□□□ -1.56not detected
CTF19YPL018W RPL11AP0C0W9 174 aaKnown RBP5.31□□□□□ -1.56
CTF19YPL018W YMR31P19955 123 aa5.31□□□□□ -1.56
CTF19YPL018W SEC22P22214 214 aa5.31□□□□□ -1.56
CTF19YPL018W SRY1P36007 326 aa5.31□□□□□ -1.56
CTF19YPL018W CBT1P36038 271 aaPredicted RBP5.31□□□□□ -1.56
CTF19YPL018W PMU1P36069 295 aa5.31□□□□□ -1.56
CTF19YPL018W PHM8P40025 321 aa5.31□□□□□ -1.56
CTF19YPL018W TAD2P47058 250 aa5.31□□□□□ -1.56
CTF19YPL018W YJR056CP47115 236 aa5.31□□□□□ -1.56
CTF19YPL018W APJ1P53940 528 aa5.31□□□□□ -1.56
CTF19YPL018W ACT1P60010 375 aaKnown RBP5.31□□□□□ -1.56
CTF19YPL018W ADH6Q04894 360 aaKnown RBP5.31□□□□□ -1.56
CTF19YPL018W HOF1Q05080 669 aa5.31□□□□□ -1.56
CTF19YPL018W COA4Q05809 96 aa5.31□□□□□ -1.56
CTF19YPL018W FCF2Q12035 217 aaPredicted RBP5.31□□□□□ -1.56
CTF19YPL018W ATG31Q12421 196 aa5.31□□□□□ -1.56
CTF19YPL018W RPL11BQ3E757 174 aaPredicted RBP5.31□□□□□ -1.56
CTF19YPL018W BOL1Q3E793 110 aa5.31□□□□□ -1.56
CTF19YPL018W ILV5P06168 395 aaKnown RBP5.3□□□□□ -1.56
CTF19YPL018W STF2P16965 84 aa5.3□□□□□ -1.56
CTF19YPL018W PEX7P39108 375 aa5.3□□□□□ -1.56
CTF19YPL018W YJL118WP47022 219 aa5.3□□□□□ -1.56
CTF19YPL018W YIP1P53039 248 aa5.3□□□□□ -1.56
CTF19YPL018W MSO1P53604 210 aaKnown RBP5.3□□□□□ -1.56
CTF19YPL018W YIF1P53845 314 aaKnown RBP5.3□□□□□ -1.56
CTF19YPL018W FSH2Q05015 223 aa5.3□□□□□ -1.56
CTF19YPL018W YBR255C-AQ3E776 120 aa5.3□□□□□ -1.56
CTF19YPL018W YBR298C-AQ8TGK4 73 aa5.3□□□□□ -1.56
CTF19YPL018W BGL2P15703 313 aaKnown RBP5.29□□□□□ -1.56
CTF19YPL018W MRS4P23500 304 aa5.29□□□□□ -1.56
CTF19YPL018W RPB9P27999 122 aa5.29□□□□□ -1.56
CTF19YPL018W YKL162CP36052 402 aa5.29□□□□□ -1.56
CTF19YPL018W GEP4P38812 185 aa5.29□□□□□ -1.56
CTF19YPL018W YEA6P39953 335 aa5.29□□□□□ -1.56
CTF19YPL018W RFC2P40348 353 aa5.29□□□□□ -1.56
CTF19YPL018W YGR151CP53287 111 aa5.29□□□□□ -1.56
CTF19YPL018W FYV6P53913 173 aa5.29□□□□□ -1.56
CTF19YPL018W MIX17Q03667 156 aa5.29□□□□□ -1.56
CTF19YPL018W YMR090WQ04304 227 aaKnown RBP5.29□□□□□ -1.56
CTF19YPL018W YMR317WQ04893 1140 aa5.29□□□□□ -1.56
CTF19YPL018W ERP1Q05359 219 aaKnown RBP5.29□□□□□ -1.56
CTF19YPL018W ANT1Q06497 328 aa5.29□□□□□ -1.56
CTF19YPL018W ATO3Q12359 275 aa5.29□□□□□ -1.56
CTF19YPL018W AIM45Q12480 344 aaKnown RBP5.29□□□□□ -1.56
CTF19YPL018W RPL27AP0C2H6 136 aaKnown RBP5.28□□□□□ -1.56
CTF19YPL018W RPL27BP0C2H7 136 aaKnown RBP5.28□□□□□ -1.56
CTF19YPL018W URA5P13298 226 aaKnown RBP5.28□□□□□ -1.56
CTF19YPL018W PHO85P17157 305 aa5.28□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms