RNA–Protein interactions for RNA: YNL260C

LTO1, Transcript of Essential protein that forms a complex with Rli1p and Yae1p, yeast

Gene LTO1, Length 597 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LTO1	YNL260C	POR1	P04840	283 aa	Known RBP	2.67	□□□□□ -1.98
LTO1	YNL260C	MGT1	P26188	188 aa		2.67	□□□□□ -1.98
LTO1	YNL260C	YBR209W	P38311	105 aa		2.67	□□□□□ -1.98
LTO1	YNL260C	TVP23	P38962	199 aa		2.67	□□□□□ -1.98
LTO1	YNL260C	YER134C	P40081	178 aa		2.67	□□□□□ -1.98
LTO1	YNL260C	AYR1	P40471	297 aa		2.67	□□□□□ -1.98
LTO1	YNL260C	TMA22	P47089	198 aa	Predicted RBP	2.67	□□□□□ -1.98
LTO1	YNL260C	SAY1	P53324	424 aa		2.67	□□□□□ -1.98
LTO1	YNL260C	DYN3	Q04949	312 aa		2.67	□□□□□ -1.98
LTO1	YNL260C	SML1	Q04964	104 aa		2.67	□□□□□ -1.98
LTO1	YNL260C	SHH4	Q06236	168 aa		2.67	□□□□□ -1.98
LTO1	YNL260C	ATG40	Q99325	256 aa		2.67	□□□□□ -1.98
LTO1	YNL260C	SEC14	P24280	304 aa	Known RBP	2.66	□□□□□ -1.98
LTO1	YNL260C	ECM4	P36156	370 aa		2.66	□□□□□ -1.98
LTO1	YNL260C	LSM4	P40070	187 aa	Known RBP	2.66	□□□□□ -1.98
LTO1	YNL260C	TDA4	P47153	279 aa		2.66	□□□□□ -1.98
LTO1	YNL260C	YMR315W	Q04869	349 aa	Known RBP	2.66	□□□□□ -1.98
LTO1	YNL260C	PEX11	Q12462	236 aa		2.66	□□□□□ -1.98
LTO1	YNL260C	YAR023C	D6VPM8	179 aa		2.65	□□□□□ -1.99
LTO1	YNL260C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	2.65	□□□□□ -1.99	not detected
LTO1	YNL260C	GAA1	P39012	614 aa		2.65	□□□□□ -1.99
LTO1	YNL260C	PGA1	P53896	198 aa		2.65	□□□□□ -1.99
LTO1	YNL260C	BUD25	P85052	153 aa		2.65	□□□□□ -1.99
LTO1	YNL260C	YOR342C	Q12182	319 aa		2.65	□□□□□ -1.99
LTO1	YNL260C	YLR236C	A0A023PZG4	107 aa		2.64	□□□□□ -1.99
LTO1	YNL260C	CLG1	P35190	452 aa		2.64	□□□□□ -1.99
LTO1	YNL260C	NVJ1	P38881	321 aa		2.64	□□□□□ -1.99
LTO1	YNL260C	MTW1	P39731	289 aa		2.64	□□□□□ -1.99
LTO1	YNL260C	MPC3	P53311	146 aa		2.64	□□□□□ -1.99
LTO1	YNL260C	YNL247W	P53852	767 aa	Known RBP	2.64	□□□□□ -1.99
LTO1	YNL260C	YNL140C	P53910	189 aa		2.64	□□□□□ -1.99
LTO1	YNL260C	YMR295C	Q03559	197 aa		2.64	□□□□□ -1.99
LTO1	YNL260C	MPD1	Q12404	318 aa	Known RBP	2.64	□□□□□ -1.99
LTO1	YNL260C	FLO9	P39712	1322 aa		2.64	□□□□□ -1.99
LTO1	YNL260C	NSP1	P14907	823 aa	Known RBP	2.63	□□□□□ -1.99
LTO1	YNL260C	RAD51	P25454	400 aa		2.63	□□□□□ -1.99
LTO1	YNL260C	YKL102C	P34249	101 aa		2.63	□□□□□ -1.99
LTO1	YNL260C	JAC1	P53193	184 aa		2.63	□□□□□ -1.99
LTO1	YNL260C	SPO13	P23624	291 aa		2.62	□□□□□ -1.99
LTO1	YNL260C	MAK5	P38112	773 aa	Predicted RBP	2.62	□□□□□ -1.99
LTO1	YNL260C	FMP23	P38231	175 aa		2.62	□□□□□ -1.99
LTO1	YNL260C	GPI17	Q04080	534 aa		2.62	□□□□□ -1.99
LTO1	YNL260C	CUE4	Q04201	117 aa	Predicted RBP	2.62	□□□□□ -1.99
LTO1	YNL260C	TFC1	P32367	649 aa		2.61	□□□□□ -1.99
LTO1	YNL260C	ERJ5	P43613	295 aa	Predicted RBP	2.61	□□□□□ -1.99
LTO1	YNL260C	GPI14	P47088	403 aa	Known RBP	2.61	□□□□□ -1.99
LTO1	YNL260C	VPS71	Q03433	280 aa		2.61	□□□□□ -1.99
LTO1	YNL260C	NAT3	Q06504	195 aa		2.61	□□□□□ -1.99
LTO1	YNL260C	RAD28	Q12021	506 aa		2.61	□□□□□ -1.99
LTO1	YNL260C	YLR050C	Q12155	161 aa	Known RBP	2.61	□□□□□ -1.99
LTO1	YNL260C	FAS1	P07149	2051 aa	Known RBP	2.61	□□□□□ -1.99
LTO1	YNL260C	ARO7	P32178	256 aa		2.6	□□□□□ -1.99
LTO1	YNL260C	NSG1	P38837	291 aa		2.6	□□□□□ -1.99
LTO1	YNL260C	YER121W	P40076	114 aa		2.6	□□□□□ -1.99
LTO1	YNL260C	YFL019C	P43576	117 aa		2.6	□□□□□ -1.99
LTO1	YNL260C	KNH1	P50112	268 aa		2.6	□□□□□ -1.99
LTO1	YNL260C	HPT1	Q04178	221 aa	Known RBP	2.6	□□□□□ -1.99
LTO1	YNL260C	SHH3	Q04487	196 aa		2.6	□□□□□ -1.99
LTO1	YNL260C	YBR219C	P38317	127 aa		2.59	□□□□□ -1.99
LTO1	YNL260C	PLP1	Q04004	230 aa		2.59	□□□□□ -1.99
LTO1	YNL260C	TVP38	P36164	337 aa		2.58	□□□□□ -2
LTO1	YNL260C	CUP9	P41817	306 aa		2.58	□□□□□ -2
LTO1	YNL260C	YFR054C	P43622	192 aa		2.58	□□□□□ -2
LTO1	YNL260C	POP3	P53833	195 aa	Predicted RBP	2.58	□□□□□ -2
LTO1	YNL260C	ANT1	Q06497	328 aa		2.58	□□□□□ -2
LTO1	YNL260C	CMD1	P06787	147 aa	Known RBP	2.57	□□□□□ -2
LTO1	YNL260C	QCR2	P07257	368 aa		2.57	□□□□□ -2
LTO1	YNL260C	TIR1	P10863	254 aa		2.57	□□□□□ -2
LTO1	YNL260C	RFC2	P40348	353 aa		2.57	□□□□□ -2
LTO1	YNL260C	SBH1	P52870	82 aa		2.57	□□□□□ -2
LTO1	YNL260C	DIG2	Q03373	323 aa	Known RBP	2.57	□□□□□ -2
LTO1	YNL260C	YMR253C	Q04835	414 aa		2.57	□□□□□ -2
LTO1	YNL260C	IRC23	Q08416	157 aa		2.57	□□□□□ -2
LTO1	YNL260C	DGK1	Q12382	290 aa		2.57	□□□□□ -2
LTO1	YNL260C	YLR412C-A	Q3E742	68 aa		2.57	□□□□□ -2
LTO1	YNL260C	CYR1	P08678	2026 aa	Known RBP	2.56	□□□□□ -2
LTO1	YNL260C	SEC11	P15367	167 aa		2.56	□□□□□ -2
LTO1	YNL260C	TMA19	P35691	167 aa	Known RBP	2.56	□□□□□ -2
LTO1	YNL260C	VMA22	P38784	181 aa		2.56	□□□□□ -2
LTO1	YNL260C	SMD2	Q06217	110 aa	Known RBP	2.56	□□□□□ -2
LTO1	YNL260C	FYV12	Q08559	129 aa		2.56	□□□□□ -2
LTO1	YNL260C	ARC19	P33204	171 aa	Known RBP	2.55	□□□□□ -2
LTO1	YNL260C	PAM17	P36147	197 aa		2.55	□□□□□ -2
LTO1	YNL260C	SPC25	P40014	221 aa		2.55	□□□□□ -2
LTO1	YNL260C	FES1	P38260	290 aa		2.54	□□□□□ -2
LTO1	YNL260C	YPL073C	P40323	161 aa		2.54	□□□□□ -2
LTO1	YNL260C	BAT2	P47176	376 aa	Known RBP	2.54	□□□□□ -2
LTO1	YNL260C	YPR174C	Q06616	221 aa	Predicted RBP	2.54	□□□□□ -2
LTO1	YNL260C	YKR045C	P36138	183 aa		2.53	□□□□□ -2
LTO1	YNL260C	AME1	P38313	324 aa		2.53	□□□□□ -2
LTO1	YNL260C	SOL1	P50278	321 aa		2.53	□□□□□ -2
LTO1	YNL260C	CSI2	Q08054	341 aa		2.53	□□□□□ -2
LTO1	YNL260C	YDL180W	Q12301	547 aa		2.53	□□□□□ -2
LTO1	YNL260C	IDP1	P21954	428 aa	Known RBP	2.52	□□□□□ -2.01
LTO1	YNL260C	NSA2	P40078	261 aa	Known RBP	2.52	□□□□□ -2.01
LTO1	YNL260C	YGL235W	P53071	178 aa		2.52	□□□□□ -2.01
LTO1	YNL260C	YNL033W	P53964	284 aa		2.52	□□□□□ -2.01
LTO1	YNL260C	BEM2	P39960	2167 aa	Known RBP	2.51	□□□□□ -2.01
LTO1	YNL260C	QCR6	P00127	147 aa		2.51	□□□□□ -2.01
LTO1	YNL260C	RPS28B	P0C0X0	67 aa	Known RBP	2.51	□□□□□ -2.01

Retrieved 100 of 5,963 RNA–protein pairs in 32.1 ms