RNA–Protein interactions for RNA: YMR240C

CUS1, Transcript of Protein required for assembly of U2 snRNP into the spliceosome, yeastyeast

Gene CUS1, Length 1,311 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUS1YMR240C TY1B-GR1Q12141 1755 aa2.84□□□□□ -1.95
CUS1YMR240C TY1B-BLQ12490 1755 aa2.84□□□□□ -1.95
CUS1YMR240C RPL25P04456 142 aaKnown RBP2.84□□□□□ -1.96
CUS1YMR240C MAG1P22134 296 aaKnown RBP2.84□□□□□ -1.96
CUS1YMR240C SEC14P24280 304 aaKnown RBP2.84□□□□□ -1.96
CUS1YMR240C PEX4P29340 183 aa2.84□□□□□ -1.96
CUS1YMR240C PTM1P32857 523 aa2.84□□□□□ -1.96
CUS1YMR240C UTP30P36144 274 aaKnown RBP2.84□□□□□ -1.96
CUS1YMR240C YER076CP40049 302 aa2.84□□□□□ -1.96
CUS1YMR240C LSM4P40070 187 aaKnown RBP2.84□□□□□ -1.96
CUS1YMR240C CIS3P47001 227 aa2.84□□□□□ -1.96
CUS1YMR240C MOG1P47123 218 aa2.84□□□□□ -1.96
CUS1YMR240C AIM25P47140 327 aa2.84□□□□□ -1.96
CUS1YMR240C DAN1P47178 298 aa2.84□□□□□ -1.96
CUS1YMR240C AIF1P52923 378 aa2.84□□□□□ -1.96
CUS1YMR240C YGL204CP53089 101 aa2.84□□□□□ -1.96
CUS1YMR240C SWP1Q02795 286 aa2.84□□□□□ -1.96
CUS1YMR240C YLR031WQ07978 186 aa2.84□□□□□ -1.96
CUS1YMR240C MCP1Q12106 302 aa2.84□□□□□ -1.96
CUS1YMR240C PEX11Q12462 236 aa2.84□□□□□ -1.96
CUS1YMR240C YKR041WP36134 250 aa2.83□□□□□ -1.96
CUS1YMR240C AGE2P40529 298 aa2.83□□□□□ -1.96
CUS1YMR240C FMP32P43557 207 aa2.83□□□□□ -1.96
CUS1YMR240C YDR476CQ03362 224 aa2.83□□□□□ -1.96
CUS1YMR240C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.83□□□□□ -1.96not detected
CUS1YMR240C YPL162CQ12042 273 aa2.83□□□□□ -1.96
CUS1YMR240C RKR1Q04781 1562 aa2.82□□□□□ -1.96
CUS1YMR240C RPS24AP0CX31 135 aaKnown RBP2.82□□□□□ -1.96
CUS1YMR240C RPS24BP0CX32 135 aaKnown RBP2.82□□□□□ -1.96
CUS1YMR240C SNF4P12904 322 aa2.82□□□□□ -1.96
CUS1YMR240C SCL1P21243 252 aaKnown RBP2.82□□□□□ -1.96
CUS1YMR240C BUB2P26448 306 aaPredicted RBP2.82□□□□□ -1.96
CUS1YMR240C CLG1P35190 452 aa2.82□□□□□ -1.96
CUS1YMR240C UPS2P35200 230 aa2.82□□□□□ -1.96
CUS1YMR240C ERV15P38312 142 aa2.82□□□□□ -1.96
CUS1YMR240C VMA22P38784 181 aa2.82□□□□□ -1.96
CUS1YMR240C AST2P39945 430 aaKnown RBP2.82□□□□□ -1.96
CUS1YMR240C PGD1P40356 397 aa2.82□□□□□ -1.96
CUS1YMR240C YDR249CQ03787 373 aa2.82□□□□□ -1.96
CUS1YMR240C DYN3Q04949 312 aa2.82□□□□□ -1.96
CUS1YMR240C RIO1Q12196 484 aaKnown RBP2.82□□□□□ -1.96
CUS1YMR240C TAF2P23255 1407 aa2.82□□□□□ -1.96
CUS1YMR240C ESC1Q03661 1658 aaKnown RBP2.81□□□□□ -1.96
CUS1YMR240C SEN2P16658 377 aa2.81□□□□□ -1.96
CUS1YMR240C IDP1P21954 428 aaKnown RBP2.81□□□□□ -1.96
CUS1YMR240C HMF1P40037 129 aaKnown RBP2.81□□□□□ -1.96
CUS1YMR240C YNR062CP53748 327 aa2.81□□□□□ -1.96
CUS1YMR240C YNL184CP53876 108 aa2.81□□□□□ -1.96
CUS1YMR240C SPG3Q04398 127 aaPredicted RBP2.81□□□□□ -1.96
CUS1YMR240C YPR127WQ06494 345 aa2.81□□□□□ -1.96
CUS1YMR240C TSC3Q3E790 80 aa2.81□□□□□ -1.96
CUS1YMR240C SIR2P06700 562 aa2.8□□□□□ -1.96
CUS1YMR240C URA5P13298 226 aaKnown RBP2.8□□□□□ -1.96
CUS1YMR240C MRPS28P21771 286 aa2.8□□□□□ -1.96
CUS1YMR240C PHO88P38264 188 aaPredicted RBP2.8□□□□□ -1.96
CUS1YMR240C NVJ1P38881 321 aa2.8□□□□□ -1.96
CUS1YMR240C CYC2P38909 366 aa2.8□□□□□ -1.96
CUS1YMR240C FCY21P40039 528 aa2.8□□□□□ -1.96
CUS1YMR240C YJL027CP47063 138 aaPredicted RBP2.8□□□□□ -1.96
CUS1YMR240C AIM34Q03673 198 aa2.8□□□□□ -1.96
CUS1YMR240C HNT1Q04344 158 aaKnown RBP2.8□□□□□ -1.96
CUS1YMR240C YOL160WQ08321 113 aa2.8□□□□□ -1.96
CUS1YMR240C EFG1Q3E705 233 aaKnown RBP2.8□□□□□ -1.96
CUS1YMR240C BUD4P47136 1447 aa2.8□□□□□ -1.96
CUS1YMR240C BPT1P14772 1559 aa2.8□□□□□ -1.96
CUS1YMR240C STU1P38198 1513 aa2.79□□□□□ -1.96
CUS1YMR240C TIM9O74700 87 aa2.79□□□□□ -1.96
CUS1YMR240C RPB3P16370 318 aaKnown RBP2.79□□□□□ -1.96
CUS1YMR240C BET1P22804 142 aa2.79□□□□□ -1.96
CUS1YMR240C AHC2P25649 128 aa2.79□□□□□ -1.96
CUS1YMR240C ARO7P32178 256 aa2.79□□□□□ -1.96
CUS1YMR240C MRPL17P36528 281 aa2.79□□□□□ -1.96
CUS1YMR240C NRG2P38082 220 aa2.79□□□□□ -1.96
CUS1YMR240C CIN5P40917 295 aa2.79□□□□□ -1.96
CUS1YMR240C RPL33BP41056 107 aaKnown RBP2.79□□□□□ -1.96
CUS1YMR240C TMA20P89886 181 aaPredicted RBP2.79□□□□□ -1.96
CUS1YMR240C PKR1Q03880 122 aaKnown RBP2.79□□□□□ -1.96
CUS1YMR240C HPT1Q04178 221 aaKnown RBP2.79□□□□□ -1.96
CUS1YMR240C SHH4Q06236 168 aa2.79□□□□□ -1.96
CUS1YMR240C YFR032C-BQ8TGU2 87 aa2.79□□□□□ -1.96
CUS1YMR240C MDS3P53094 1487 aa2.79□□□□□ -1.96
CUS1YMR240C SCC2Q04002 1493 aa2.79□□□□□ -1.96
CUS1YMR240C YPK9Q12697 1472 aa2.79□□□□□ -1.96
CUS1YMR240C PBI2P0CT04 75 aaKnown RBP2.78□□□□□ -1.96
CUS1YMR240C UMP1P38293 148 aa2.78□□□□□ -1.96
CUS1YMR240C UBC12P52491 188 aa2.78□□□□□ -1.96
CUS1YMR240C ERG25P53045 309 aa2.78□□□□□ -1.96
CUS1YMR240C DOC1P53068 250 aa2.78□□□□□ -1.96
CUS1YMR240C MPA43P53583 542 aaPredicted RBP2.78□□□□□ -1.96
CUS1YMR240C POL1P13382 1468 aa2.78□□□□□ -1.96
CUS1YMR240C MMS22Q06164 1454 aa2.78□□□□□ -1.96
CUS1YMR240C ECM5Q03214 1411 aa2.77□□□□□ -1.97
CUS1YMR240C RAS2P01120 322 aaKnown RBP2.77□□□□□ -1.97
CUS1YMR240C PET9P18239 318 aaKnown RBP2.77□□□□□ -1.97
CUS1YMR240C SVP26P38869 228 aa2.77□□□□□ -1.97
CUS1YMR240C GLE2P40066 365 aa2.77□□□□□ -1.97
CUS1YMR240C GVP36P40531 326 aaKnown RBP2.77□□□□□ -1.97
CUS1YMR240C RAV2Q03956 351 aa2.77□□□□□ -1.97
CUS1YMR240C YPR014CQ6B0W2 109 aa2.77□□□□□ -1.97
CUS1YMR240C ULS1Q08562 1619 aa2.77□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 32.8 ms