RNA–Protein interactions for RNA: YLR062C

BUD28, Transcript of Dubious open reading frame, yeastyeast

Gene BUD28, Length 378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD28YLR062C HTB1P02293 131 aaKnown RBP3.98□□□□□ -1.77
BUD28YLR062C RPP2AP05319 106 aaKnown RBP3.98□□□□□ -1.77
BUD28YLR062C YHR212W-AP0CX91 67 aa3.98□□□□□ -1.77
BUD28YLR062C STF2P16965 84 aa3.98□□□□□ -1.77
BUD28YLR062C OLE1P21147 510 aaKnown RBP3.98□□□□□ -1.77
BUD28YLR062C AFR1P33304 620 aa3.98□□□□□ -1.77
BUD28YLR062C LAG1P38703 411 aa3.98□□□□□ -1.77
BUD28YLR062C COS8P38723 381 aa3.98□□□□□ -1.77
BUD28YLR062C GEP4P38812 185 aa3.98□□□□□ -1.77
BUD28YLR062C AIM20P40451 204 aa3.98□□□□□ -1.77
BUD28YLR062C IMD3P50095 523 aaKnown RBP3.98□□□□□ -1.77
BUD28YLR062C COX18P53239 316 aa3.98□□□□□ -1.77
BUD28YLR062C CRH1P53301 507 aa3.98□□□□□ -1.77
BUD28YLR062C CAB5Q03941 241 aa3.98□□□□□ -1.77
BUD28YLR062C RXT3Q07458 294 aa3.98□□□□□ -1.77
BUD28YLR062C NDE2Q07500 545 aa3.98□□□□□ -1.77
BUD28YLR062C YOL029CQ08187 201 aa3.98□□□□□ -1.77
BUD28YLR062C YLR125WQ12138 136 aa3.98□□□□□ -1.77
BUD28YLR062C CAP2P13517 287 aa3.97□□□□□ -1.77
BUD28YLR062C NOP1P15646 327 aaKnown RBP3.97□□□□□ -1.77
BUD28YLR062C ELO2P25358 347 aa3.97□□□□□ -1.77
BUD28YLR062C YKL075CP36083 450 aa3.97□□□□□ -1.77
BUD28YLR062C IRC24P40580 263 aa3.97□□□□□ -1.77
BUD28YLR062C PBP4Q07362 185 aaKnown RBP3.97□□□□□ -1.77
BUD28YLR062C YJR112W-AQ3E743 109 aa3.97□□□□□ -1.77
BUD28YLR062C YBR255C-AQ3E776 120 aa3.97□□□□□ -1.77
BUD28YLR062C QCR2P07257 368 aa3.96□□□□□ -1.78
BUD28YLR062C NHP6BP11633 99 aaKnown RBP3.96□□□□□ -1.78
BUD28YLR062C MRS4P23500 304 aa3.96□□□□□ -1.78
BUD28YLR062C YCR016WP25617 290 aaKnown RBP3.96□□□□□ -1.78
BUD28YLR062C RPD3P32561 433 aa3.96□□□□□ -1.78
BUD28YLR062C ATP3P38077 311 aaKnown RBP3.96□□□□□ -1.78
BUD28YLR062C COX15P40086 486 aa3.96□□□□□ -1.78
BUD28YLR062C RFC2P40348 353 aa3.96□□□□□ -1.78
BUD28YLR062C LST8P41318 303 aa3.96□□□□□ -1.78
BUD28YLR062C ARP3P47117 449 aaKnown RBP3.96□□□□□ -1.78
BUD28YLR062C TOS8P53147 276 aa3.96□□□□□ -1.78
BUD28YLR062C YHP1Q04116 353 aa3.96□□□□□ -1.78
BUD28YLR062C FSH2Q05015 223 aa3.96□□□□□ -1.78
BUD28YLR062C YNG1Q08465 219 aa3.96□□□□□ -1.78
BUD28YLR062C PRM3Q08931 133 aa3.96□□□□□ -1.78
BUD28YLR062C ENV7Q12003 364 aa3.96□□□□□ -1.78
BUD28YLR062C RKI1Q12189 258 aa3.96□□□□□ -1.78
BUD28YLR062C RDI1Q12434 202 aa3.96□□□□□ -1.78
BUD28YLR062C SPS2P08459 502 aa3.95□□□□□ -1.78
BUD28YLR062C YPS1P32329 569 aa3.95□□□□□ -1.78
BUD28YLR062C YBR144CP34215 104 aa3.95□□□□□ -1.78
BUD28YLR062C MRPL38P35996 138 aaPredicted RBP3.95□□□□□ -1.78
BUD28YLR062C DFG10P40526 253 aa3.95□□□□□ -1.78
BUD28YLR062C YKE4P40544 346 aa3.95□□□□□ -1.78
BUD28YLR062C ERG25P53045 309 aa3.95□□□□□ -1.78
BUD28YLR062C NIF3P53081 288 aa3.95□□□□□ -1.78
BUD28YLR062C GPG1P53130 126 aa3.95□□□□□ -1.78
BUD28YLR062C YGR219WP53307 113 aa3.95□□□□□ -1.78
BUD28YLR062C PAM18Q07914 168 aa3.95□□□□□ -1.78
BUD28YLR062C FEX2Q08991 375 aa3.95□□□□□ -1.78
BUD28YLR062C ATG5Q12380 294 aa3.95□□□□□ -1.78
BUD28YLR062C TRM13Q12383 476 aa3.95□□□□□ -1.78
BUD28YLR062C TDH1P00360 332 aaKnown RBP3.94□□□□□ -1.78
BUD28YLR062C SOD1P00445 154 aaKnown RBP3.94□□□□□ -1.78
BUD28YLR062C UTR5P32630 166 aa3.94□□□□□ -1.78
BUD28YLR062C MRPL3P36516 390 aa3.94□□□□□ -1.78
BUD28YLR062C ERV15P38312 142 aa3.94□□□□□ -1.78
BUD28YLR062C YPT31P38555 223 aaKnown RBP3.94□□□□□ -1.78
BUD28YLR062C LSM12P38828 187 aaKnown RBP3.94□□□□□ -1.78
BUD28YLR062C SYG1P40528 902 aa3.94□□□□□ -1.78
BUD28YLR062C YJR012CP47087 207 aa3.94□□□□□ -1.78
BUD28YLR062C IRC23Q08416 157 aa3.94□□□□□ -1.78
BUD28YLR062C YCT1Q12235 531 aa3.94□□□□□ -1.78
BUD28YLR062C ATG31Q12421 196 aa3.94□□□□□ -1.78
BUD28YLR062C YGL258W-AQ3E740 77 aa3.94□□□□□ -1.78
BUD28YLR062C MRP17P28778 131 aa3.93□□□□□ -1.78
BUD28YLR062C BFR1P38934 470 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
BUD28YLR062C YNL194CP40169 301 aa3.93□□□□□ -1.78
BUD28YLR062C ARO8P53090 500 aaKnown RBP3.93□□□□□ -1.78
BUD28YLR062C YGR050CP53231 118 aa3.93□□□□□ -1.78
BUD28YLR062C SSU72P53538 206 aaPredicted RBP3.93□□□□□ -1.78
BUD28YLR062C VPS28Q02767 242 aa3.93□□□□□ -1.78
BUD28YLR062C YMR181CQ03231 154 aa3.93□□□□□ -1.78
BUD28YLR062C PEX10Q05568 337 aa3.93□□□□□ -1.78
BUD28YLR062C RAD28Q12021 506 aa3.93□□□□□ -1.78
BUD28YLR062C TPI1P00942 248 aaKnown RBP3.92□□□□□ -1.78
BUD28YLR062C TRP4P07285 380 aaPredicted RBP3.92□□□□□ -1.78
BUD28YLR062C PUT1P09368 476 aa3.92□□□□□ -1.78
BUD28YLR062C MDM10P18409 493 aa3.92□□□□□ -1.78
BUD28YLR062C SUA5P32579 426 aa3.92□□□□□ -1.78
BUD28YLR062C YBR242WP38331 238 aa3.92□□□□□ -1.78
BUD28YLR062C MIC12P38341 106 aa3.92□□□□□ -1.78
BUD28YLR062C CAB4P53332 305 aa3.92□□□□□ -1.78
BUD28YLR062C EST3Q03096 181 aa3.92□□□□□ -1.78
BUD28YLR062C YLR224WQ05947 369 aa3.92□□□□□ -1.78
BUD28YLR062C FEX1Q08913 375 aa3.92□□□□□ -1.78
BUD28YLR062C ARG80P07249 177 aa3.91□□□□□ -1.78
BUD28YLR062C ERV1P27882 189 aa3.91□□□□□ -1.78
BUD28YLR062C YPC1P38298 316 aa3.91□□□□□ -1.78
BUD28YLR062C YAR068WP39564 161 aa3.91□□□□□ -1.78
BUD28YLR062C MRPL49P40858 161 aaPredicted RBP3.91□□□□□ -1.78
BUD28YLR062C CPD1P53314 239 aa3.91□□□□□ -1.78
BUD28YLR062C MSO1P53604 210 aaKnown RBP3.91□□□□□ -1.78
BUD28YLR062C MRPS16Q02608 121 aa3.91□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms