RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C GRX8Q05926 109 aa1.56□□□□□ -2.16
SHE2YKL130C SMD2Q06217 110 aaKnown RBP1.56□□□□□ -2.16
SHE2YKL130C GGA1Q06336 557 aa1.56□□□□□ -2.16
SHE2YKL130C GRE1Q08969 168 aa1.56□□□□□ -2.16
SHE2YKL130C YPL162CQ12042 273 aa1.56□□□□□ -2.16
SHE2YKL130C RIO1Q12196 484 aaKnown RBP1.56□□□□□ -2.16
SHE2YKL130C PRM7Q12459 698 aa1.56□□□□□ -2.16
SHE2YKL130C LYS2P07702 1392 aa1.56□□□□□ -2.16
SHE2YKL130C MBF1O14467 151 aaKnown RBP1.55□□□□□ -2.16
SHE2YKL130C MSW1P04803 379 aa1.55□□□□□ -2.16
SHE2YKL130C RPL26AP05743 127 aaKnown RBP1.55□□□□□ -2.16
SHE2YKL130C SNF4P12904 322 aa1.55□□□□□ -2.16
SHE2YKL130C URA5P13298 226 aaKnown RBP1.55□□□□□ -2.16
SHE2YKL130C GCY1P14065 312 aaKnown RBP RIP-Chip data1.55□□□□□ -2.16not detected
SHE2YKL130C GRX2P17695 143 aaKnown RBP1.55□□□□□ -2.16
SHE2YKL130C BET1P22804 142 aa1.55□□□□□ -2.16
SHE2YKL130C CNB1P25296 175 aa1.55□□□□□ -2.16
SHE2YKL130C TRX3P25372 127 aa1.55□□□□□ -2.16
SHE2YKL130C RME1P32338 300 aaKnown RBP1.55□□□□□ -2.16
SHE2YKL130C SEC17P32602 292 aa1.55□□□□□ -2.16
SHE2YKL130C MED6P38782 295 aa1.55□□□□□ -2.16
SHE2YKL130C SPO73P40031 143 aa1.55□□□□□ -2.16
SHE2YKL130C GLE2P40066 365 aa1.55□□□□□ -2.16
SHE2YKL130C MRPL49P40858 161 aaPredicted RBP1.55□□□□□ -2.16
SHE2YKL130C YJL144WP47009 104 aa1.55□□□□□ -2.16
SHE2YKL130C RPL26BP53221 127 aaKnown RBP1.55□□□□□ -2.16
SHE2YKL130C CAB4P53332 305 aa1.55□□□□□ -2.16
SHE2YKL130C YNL184CP53876 108 aa1.55□□□□□ -2.16
SHE2YKL130C YLR460CP54007 376 aa1.55□□□□□ -2.16
SHE2YKL130C YDR249CQ03787 373 aa1.55□□□□□ -2.16
SHE2YKL130C MHT1Q12525 324 aa1.55□□□□□ -2.16
SHE2YKL130C SNF2P22082 1703 aa1.54□□□□□ -2.16
SHE2YKL130C RPB3P16370 318 aaKnown RBP1.54□□□□□ -2.16
SHE2YKL130C CKS1P20486 150 aaKnown RBP1.54□□□□□ -2.16
SHE2YKL130C UTP30P36144 274 aaKnown RBP1.54□□□□□ -2.16
SHE2YKL130C SDH4P37298 181 aa1.54□□□□□ -2.16
SHE2YKL130C FES1P38260 290 aa1.54□□□□□ -2.16
SHE2YKL130C CTR2P38865 189 aa1.54□□□□□ -2.16
SHE2YKL130C SMD3P43321 101 aaKnown RBP1.54□□□□□ -2.16
SHE2YKL130C FMP32P43557 207 aa1.54□□□□□ -2.16
SHE2YKL130C MNN5P46982 586 aa1.54□□□□□ -2.16
SHE2YKL130C SNX4P47057 423 aa1.54□□□□□ -2.16
SHE2YKL130C DSK2P48510 373 aa1.54□□□□□ -2.16
SHE2YKL130C UBC12P52491 188 aa1.54□□□□□ -2.16
SHE2YKL130C EFM5P53200 248 aaKnown RBP1.54□□□□□ -2.16
SHE2YKL130C YNL140CP53910 189 aa1.54□□□□□ -2.16
SHE2YKL130C SWP1Q02795 286 aa1.54□□□□□ -2.16
SHE2YKL130C YLR031WQ07978 186 aa1.54□□□□□ -2.16
SHE2YKL130C MCP1Q12106 302 aa1.54□□□□□ -2.16
SHE2YKL130C TSC3Q3E790 80 aa1.54□□□□□ -2.16
SHE2YKL130C YFR032C-BQ8TGU2 87 aa1.54□□□□□ -2.16
SHE2YKL130C APC1P53886 1748 aa1.54□□□□□ -2.16
SHE2YKL130C TY4B-HP0C2J7 1802 aa1.53□□□□□ -2.16
SHE2YKL130C MRPS28P21771 286 aa1.53□□□□□ -2.16
SHE2YKL130C CLB6P32943 380 aa1.53□□□□□ -2.16
SHE2YKL130C MAK5P38112 773 aaPredicted RBP1.53□□□□□ -2.16
SHE2YKL130C AIM2P39721 246 aa1.53□□□□□ -2.16
SHE2YKL130C YFH7P43591 353 aa1.53□□□□□ -2.16
SHE2YKL130C TY4B-JP47024 1803 aa1.53□□□□□ -2.16
SHE2YKL130C AIF1P52923 378 aa1.53□□□□□ -2.16
SHE2YKL130C JAC1P53193 184 aa1.53□□□□□ -2.16
SHE2YKL130C YNL247WP53852 767 aaKnown RBP1.53□□□□□ -2.16
SHE2YKL130C TRM12Q04235 462 aa1.53□□□□□ -2.16
SHE2YKL130C HNT1Q04344 158 aaKnown RBP1.53□□□□□ -2.16
SHE2YKL130C NEJ1Q06148 342 aa1.53□□□□□ -2.16
SHE2YKL130C SUE1Q06524 206 aa1.53□□□□□ -2.16
SHE2YKL130C ARR2Q06597 130 aa1.53□□□□□ -2.16
SHE2YKL130C YLR050CQ12155 161 aaKnown RBP1.53□□□□□ -2.16
SHE2YKL130C FKS3Q04952 1785 aa1.52□□□□□ -2.17
SHE2YKL130C TIM9O74700 87 aa1.52□□□□□ -2.17
SHE2YKL130C QCR2P07257 368 aa1.52□□□□□ -2.17
SHE2YKL130C PET9P18239 318 aaKnown RBP1.52□□□□□ -2.17
SHE2YKL130C SCO1P23833 295 aa1.52□□□□□ -2.17
SHE2YKL130C SEC14P24280 304 aaKnown RBP1.52□□□□□ -2.17
SHE2YKL130C CLG1P35190 452 aa1.52□□□□□ -2.17
SHE2YKL130C MRPL17P36528 281 aa1.52□□□□□ -2.17
SHE2YKL130C LSM4P40070 187 aaKnown RBP1.52□□□□□ -2.17
SHE2YKL130C YGR219WP53307 113 aa1.52□□□□□ -2.17
SHE2YKL130C COS6P53344 381 aa1.52□□□□□ -2.17
SHE2YKL130C SLM2P53955 656 aa1.52□□□□□ -2.17
SHE2YKL130C AIM34Q03673 198 aa1.52□□□□□ -2.17
SHE2YKL130C PLP1Q04004 230 aa1.52□□□□□ -2.17
SHE2YKL130C YMR315WQ04869 349 aaKnown RBP1.52□□□□□ -2.17
SHE2YKL130C RDS3Q06835 107 aaPredicted RBP1.52□□□□□ -2.17
SHE2YKL130C YOR283WQ12040 230 aaKnown RBP1.52□□□□□ -2.17
SHE2YKL130C YPR014CQ6B0W2 109 aa1.52□□□□□ -2.17
SHE2YKL130C YIL177CP40434 1758 aa1.52□□□□□ -2.17
SHE2YKL130C YJL225CP40889 1758 aa1.52□□□□□ -2.17
SHE2YKL130C AHC2P25649 128 aa1.51□□□□□ -2.17
SHE2YKL130C YCR090CP25654 182 aaKnown RBP1.51□□□□□ -2.17
SHE2YKL130C MEI4P29467 408 aa1.51□□□□□ -2.17
SHE2YKL130C MDH3P32419 343 aaKnown RBP RIP-Chip data1.51□□□□□ -2.17not detected
SHE2YKL130C SNC2P33328 115 aa1.51□□□□□ -2.17
SHE2YKL130C YKR041WP36134 250 aa1.51□□□□□ -2.17
SHE2YKL130C UMP1P38293 148 aa1.51□□□□□ -2.17
SHE2YKL130C AME1P38313 324 aa1.51□□□□□ -2.17
SHE2YKL130C NVJ1P38881 321 aa1.51□□□□□ -2.17
SHE2YKL130C YER121WP40076 114 aa1.51□□□□□ -2.17
SHE2YKL130C PGD1P40356 397 aa1.51□□□□□ -2.17
SHE2YKL130C ICE2P40499 491 aa1.51□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 32 ms