RNA–Protein interactions for RNA: YJR060W

CBF1, Transcript of Basic helix-loop-helix (bHLH) protein, yeastyeast

Gene CBF1, Length 1,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF1YJR060W RPL21AQ02753 160 aaKnown RBP4.36□□□□□ -1.71
CBF1YJR060W YDR415CQ04033 374 aaPredicted RBP4.36□□□□□ -1.71
CBF1YJR060W PEX10Q05568 337 aa4.36□□□□□ -1.71
CBF1YJR060W ARR2Q06597 130 aa4.36□□□□□ -1.71
CBF1YJR060W YOR385WQ08909 290 aa4.36□□□□□ -1.71
CBF1YJR060W RFM1Q12192 310 aa4.36□□□□□ -1.71
CBF1YJR060W RPL21BQ12672 160 aaKnown RBP4.36□□□□□ -1.71
CBF1YJR060W UBA3Q99344 299 aa4.36□□□□□ -1.71
CBF1YJR060W YLL053CP0CD98 152 aa4.35□□□□□ -1.71
CBF1YJR060W VMA11P32842 164 aa4.35□□□□□ -1.71
CBF1YJR060W YGL114WP53134 725 aa4.35□□□□□ -1.71
CBF1YJR060W RSM27P53305 110 aa4.35□□□□□ -1.71
CBF1YJR060W HSK3P69852 69 aa4.35□□□□□ -1.71
CBF1YJR060W YML018CQ03730 393 aa4.35□□□□□ -1.71
CBF1YJR060W FIT1Q04433 528 aa4.35□□□□□ -1.71
CBF1YJR060W GEP3Q08622 556 aa4.35□□□□□ -1.71
CBF1YJR060W HTZ1Q12692 134 aaKnown RBP4.35□□□□□ -1.71
CBF1YJR060W YLR365WQ7LIF2 110 aa4.35□□□□□ -1.71
CBF1YJR060W YMR105W-AQ8TGS8 64 aa4.35□□□□□ -1.71
CBF1YJR060W FUS3P16892 353 aaKnown RBP4.34□□□□□ -1.71
CBF1YJR060W LSB5P25369 354 aa4.34□□□□□ -1.71
CBF1YJR060W RNP1P32385 249 aa4.34□□□□□ -1.71
CBF1YJR060W UTP30P36144 274 aaKnown RBP4.34□□□□□ -1.71
CBF1YJR060W FIG1P38224 298 aa4.34□□□□□ -1.71
CBF1YJR060W YBR242WP38331 238 aa4.34□□□□□ -1.71
CBF1YJR060W YIP1P53039 248 aa4.34□□□□□ -1.71
CBF1YJR060W SLX9P53251 210 aaPredicted RBP4.34□□□□□ -1.71
CBF1YJR060W WSC2P53832 503 aa4.34□□□□□ -1.71
CBF1YJR060W VBA1Q04301 562 aa4.34□□□□□ -1.71
CBF1YJR060W YOL029CQ08187 201 aa4.34□□□□□ -1.71
CBF1YJR060W SCP1Q08873 200 aa4.34□□□□□ -1.71
CBF1YJR060W YOR029WQ12243 111 aa4.34□□□□□ -1.71
CBF1YJR060W CCW14O13547 238 aa4.33□□□□□ -1.72
CBF1YJR060W SPS2P08459 502 aa4.33□□□□□ -1.72
CBF1YJR060W YER190C-BP0CX94 160 aa4.33□□□□□ -1.72
CBF1YJR060W YEL077W-AP0CX95 160 aa4.33□□□□□ -1.72
CBF1YJR060W YGR296C-BP0CX96 160 aa4.33□□□□□ -1.72
CBF1YJR060W YPL283W-BP0CX97 160 aa4.33□□□□□ -1.72
CBF1YJR060W YPR204C-AP0CX98 160 aa4.33□□□□□ -1.72
CBF1YJR060W BGL2P15703 313 aaKnown RBP4.33□□□□□ -1.72
CBF1YJR060W CPR4P25334 318 aa4.33□□□□□ -1.72
CBF1YJR060W SUA7P29055 345 aaPredicted RBP4.33□□□□□ -1.72
CBF1YJR060W ERG2P32352 222 aa4.33□□□□□ -1.72
CBF1YJR060W RPB7P34087 171 aa4.33□□□□□ -1.72
CBF1YJR060W YUH1P35127 236 aa4.33□□□□□ -1.72
CBF1YJR060W CBT1P36038 271 aaPredicted RBP4.33□□□□□ -1.72
CBF1YJR060W PAN3P36102 679 aaPredicted RBP4.33□□□□□ -1.72
CBF1YJR060W YCR041WP37265 110 aa4.33□□□□□ -1.72
CBF1YJR060W SWD3P38123 315 aa4.33□□□□□ -1.72
CBF1YJR060W CAB5Q03941 241 aa4.33□□□□□ -1.72
CBF1YJR060W ADH6Q04894 360 aaKnown RBP4.33□□□□□ -1.72
CBF1YJR060W SYM1Q06563 197 aa4.33□□□□□ -1.72
CBF1YJR060W YPD1Q07688 167 aa4.33□□□□□ -1.72
CBF1YJR060W YOR292CQ08743 309 aa4.33□□□□□ -1.72
CBF1YJR060W TFC7Q12415 435 aa4.33□□□□□ -1.72
CBF1YJR060W YPR108W-AQ3E7B3 70 aa4.33□□□□□ -1.72
CBF1YJR060W SEN2P16658 377 aa4.32□□□□□ -1.72
CBF1YJR060W MIR1P23641 311 aaKnown RBP4.32□□□□□ -1.72
CBF1YJR060W TRR1P29509 319 aaKnown RBP4.32□□□□□ -1.72
CBF1YJR060W SPS18P32572 300 aa4.32□□□□□ -1.72
CBF1YJR060W ECM31P38122 312 aa4.32□□□□□ -1.72
CBF1YJR060W POP8P38208 133 aa4.32□□□□□ -1.72
CBF1YJR060W IKI1P38874 309 aa4.32□□□□□ -1.72
CBF1YJR060W GPI15P53961 229 aa4.32□□□□□ -1.72
CBF1YJR060W MRPS16Q02608 121 aa4.32□□□□□ -1.72
CBF1YJR060W LPP1Q04396 274 aa4.32□□□□□ -1.72
CBF1YJR060W RIM9Q04734 239 aa4.32□□□□□ -1.72
CBF1YJR060W RDI1Q12434 202 aa4.32□□□□□ -1.72
CBF1YJR060W YOR192C-CQ3E736 78 aa4.32□□□□□ -1.72
CBF1YJR060W NHP6BP11633 99 aaKnown RBP4.31□□□□□ -1.72
CBF1YJR060W RNA14P25298 677 aaKnown RBP4.31□□□□□ -1.72
CBF1YJR060W AGA2P32781 87 aa4.31□□□□□ -1.72
CBF1YJR060W SRY1P36007 326 aa4.31□□□□□ -1.72
CBF1YJR060W PMU1P36069 295 aa4.31□□□□□ -1.72
CBF1YJR060W YKE4P40544 346 aa4.31□□□□□ -1.72
CBF1YJR060W YJL118WP47022 219 aa4.31□□□□□ -1.72
CBF1YJR060W ERV25P54837 211 aaKnown RBP4.31□□□□□ -1.72
CBF1YJR060W TSA2Q04120 196 aa4.31□□□□□ -1.72
CBF1YJR060W YMR317WQ04893 1140 aa4.31□□□□□ -1.72
CBF1YJR060W PRM4Q12498 284 aa4.31□□□□□ -1.72
CBF1YJR060W PHO85P17157 305 aa4.3□□□□□ -1.72
CBF1YJR060W YCP4P25349 247 aaKnown RBP4.3□□□□□ -1.72
CBF1YJR060W BUD23P25627 275 aaPredicted RBP4.3□□□□□ -1.72
CBF1YJR060W MRP17P28778 131 aa4.3□□□□□ -1.72
CBF1YJR060W SUA5P32579 426 aa4.3□□□□□ -1.72
CBF1YJR060W COS8P38723 381 aa4.3□□□□□ -1.72
CBF1YJR060W BFR1P38934 470 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
CBF1YJR060W SSO2P39926 295 aa4.3□□□□□ -1.72
CBF1YJR060W RPL9BP51401 191 aaKnown RBP4.3□□□□□ -1.72
CBF1YJR060W YGL262WP53054 175 aa4.3□□□□□ -1.72
CBF1YJR060W NIF3P53081 288 aa4.3□□□□□ -1.72
CBF1YJR060W RTT103Q05543 409 aa4.3□□□□□ -1.72
CBF1YJR060W HRD1Q08109 551 aa4.3□□□□□ -1.72
CBF1YJR060W YOL118CQ08259 102 aa4.3□□□□□ -1.72
CBF1YJR060W YNG1Q08465 219 aa4.3□□□□□ -1.72
CBF1YJR060W BOL1Q3E793 110 aa4.3□□□□□ -1.72
CBF1YJR060W RPL9AP05738 191 aaKnown RBP4.29□□□□□ -1.72
CBF1YJR060W QCR2P07257 368 aa4.29□□□□□ -1.72
CBF1YJR060W YMR31P19955 123 aa4.29□□□□□ -1.72
CBF1YJR060W RAD23P32628 398 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms