RNA–Protein interactions for RNA: YGR178C

PBP1, Transcript of Component of glucose deprivation induced stress granules, yeastyeast

Gene PBP1, Length 2,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PBP1YGR178C HOG1P32485 435 aa8.61□□□□□ -1.03
PBP1YGR178C LSM2P38203 95 aaKnown RBP8.61□□□□□ -1.03
PBP1YGR178C MID1P41821 548 aa8.61□□□□□ -1.03
PBP1YGR178C CRH1P53301 507 aa8.61□□□□□ -1.03
PBP1YGR178C YMR166CQ03829 368 aa8.61□□□□□ -1.03
PBP1YGR178C TRI1Q05024 226 aa8.61□□□□□ -1.03
PBP1YGR178C YPL264CQ08980 353 aa8.61□□□□□ -1.03
PBP1YGR178C USV1Q12132 391 aa8.61□□□□□ -1.03
PBP1YGR178C SCS22Q6Q595 175 aa8.61□□□□□ -1.03
PBP1YGR178C YLR365WQ7LIF2 110 aa8.61□□□□□ -1.03
PBP1YGR178C GAL7P08431 366 aa8.61□□□□□ -1.03
PBP1YGR178C OCH1P31755 480 aa8.61□□□□□ -1.03
PBP1YGR178C PAM17P36147 197 aa8.61□□□□□ -1.03
PBP1YGR178C TEM1P38987 245 aa8.61□□□□□ -1.03
PBP1YGR178C CUP9P41817 306 aa8.61□□□□□ -1.03
PBP1YGR178C RPA43P46669 326 aa8.61□□□□□ -1.03
PBP1YGR178C ARR3Q06598 404 aa8.61□□□□□ -1.03
PBP1YGR178C YCR024C-BQ3E7Z8 88 aa8.61□□□□□ -1.03
PBP1YGR178C MES1P00958 751 aaKnown RBP8.6□□□□□ -1.03
PBP1YGR178C ZIM17P42844 174 aa8.6□□□□□ -1.03
PBP1YGR178C MTR2P34232 184 aaKnown RBP8.59□□□□□ -1.03
PBP1YGR178C YGR269WP40326 108 aa8.59□□□□□ -1.03
PBP1YGR178C ABM1P47146 123 aa8.59□□□□□ -1.03
PBP1YGR178C YMR007WQ03675 126 aa8.59□□□□□ -1.03
PBP1YGR178C MBF1O14467 151 aaKnown RBP8.59□□□□□ -1.03
PBP1YGR178C QCR9P22289 66 aa8.59□□□□□ -1.03
PBP1YGR178C YND1P40009 630 aa8.59□□□□□ -1.03
PBP1YGR178C GPI2P46961 280 aa8.59□□□□□ -1.03
PBP1YGR178C SSU72P53538 206 aaPredicted RBP8.59□□□□□ -1.03
PBP1YGR178C ADH6Q04894 360 aaKnown RBP8.59□□□□□ -1.03
PBP1YGR178C CNL1Q06333 122 aa8.59□□□□□ -1.03
PBP1YGR178C CSM4Q08955 156 aa8.59□□□□□ -1.03
PBP1YGR178C FRE8Q12209 686 aa8.59□□□□□ -1.03
PBP1YGR178C SMT3Q12306 101 aaKnown RBP8.59□□□□□ -1.03
PBP1YGR178C YBR255C-AQ3E776 120 aa8.59□□□□□ -1.03
PBP1YGR178C SLO1Q3E784 85 aa8.59□□□□□ -1.03
PBP1YGR178C RPS22AP0C0W1 130 aaKnown RBP8.58□□□□□ -1.04
PBP1YGR178C RPB7P34087 171 aa8.58□□□□□ -1.04
PBP1YGR178C LYS1P38998 373 aaRIP-Chip data8.58□□□□□ -1.04not detected
PBP1YGR178C PAM18Q07914 168 aa8.58□□□□□ -1.04
PBP1YGR178C YLR050CQ12155 161 aaKnown RBP8.58□□□□□ -1.04
PBP1YGR178C YPR108W-AQ3E7B3 70 aa8.58□□□□□ -1.04
PBP1YGR178C YPR117WQ06116 2489 aa8.58□□□□□ -1.04
PBP1YGR178C IMG1P25626 169 aa8.58□□□□□ -1.04
PBP1YGR178C ARO2P28777 376 aaKnown RBP8.58□□□□□ -1.04
PBP1YGR178C HED1Q03937 162 aa8.58□□□□□ -1.04
PBP1YGR178C YPL162CQ12042 273 aa8.58□□□□□ -1.04
PBP1YGR178C RPI1P23250 407 aaKnown RBP8.57□□□□□ -1.04
PBP1YGR178C HAC1P41546 238 aa8.57□□□□□ -1.04
PBP1YGR178C LOA1Q06508 300 aa8.57□□□□□ -1.04
PBP1YGR178C YPR174CQ06616 221 aaPredicted RBP8.57□□□□□ -1.04
PBP1YGR178C HAA1Q12753 694 aaKnown RBP8.57□□□□□ -1.04
PBP1YGR178C YBL059WP34224 193 aa8.56□□□□□ -1.04
PBP1YGR178C MED6P38782 295 aa8.56□□□□□ -1.04
PBP1YGR178C BAT1P38891 393 aaKnown RBP8.56□□□□□ -1.04
PBP1YGR178C YIL163CP40448 117 aa8.56□□□□□ -1.04
PBP1YGR178C YGL230CP53074 147 aa8.56□□□□□ -1.04
PBP1YGR178C YDR102CQ03864 110 aa8.56□□□□□ -1.04
PBP1YGR178C SEI1Q06058 285 aa8.56□□□□□ -1.04
PBP1YGR178C ALG6Q12001 544 aaKnown RBP8.56□□□□□ -1.04
PBP1YGR178C SEC11P15367 167 aa8.56□□□□□ -1.04
PBP1YGR178C PHD1P36093 366 aa8.56□□□□□ -1.04
PBP1YGR178C SRP14P38985 146 aa8.56□□□□□ -1.04
PBP1YGR178C UME6P39001 836 aa8.56□□□□□ -1.04
PBP1YGR178C YCK3P39962 524 aa8.56□□□□□ -1.04
PBP1YGR178C YGR017WP53210 297 aa8.56□□□□□ -1.04
PBP1YGR178C YDR286CQ05530 114 aa8.56□□□□□ -1.04
PBP1YGR178C IRC19Q07843 230 aa8.56□□□□□ -1.04
PBP1YGR178C SOD1P00445 154 aaKnown RBP8.55□□□□□ -1.04
PBP1YGR178C FCY2P17064 533 aa8.55□□□□□ -1.04
PBP1YGR178C AIM17P23180 465 aaKnown RBP8.55□□□□□ -1.04
PBP1YGR178C XPT1P47165 209 aa8.55□□□□□ -1.04
PBP1YGR178C TUB4P53378 473 aa8.55□□□□□ -1.04
PBP1YGR178C PAI3P01094 68 aa8.55□□□□□ -1.04
PBP1YGR178C ANB1P19211 157 aa8.55□□□□□ -1.04
PBP1YGR178C YCR007CP25354 239 aa8.55□□□□□ -1.04
PBP1YGR178C MSL1P40567 111 aaPredicted RBP8.55□□□□□ -1.04
PBP1YGR178C CTK2P46962 323 aa8.55□□□□□ -1.04
PBP1YGR178C YHM2Q04013 314 aa8.55□□□□□ -1.04
PBP1YGR178C YOL029CQ08187 201 aa8.55□□□□□ -1.04
PBP1YGR178C GEP5Q12393 293 aa8.55□□□□□ -1.04
PBP1YGR178C CUP2P15315 225 aa8.54□□□□□ -1.04
PBP1YGR178C HMX1P32339 317 aa8.54□□□□□ -1.04
PBP1YGR178C YBR184WP38299 523 aa8.54□□□□□ -1.04
PBP1YGR178C DFG10P40526 253 aa8.54□□□□□ -1.04
PBP1YGR178C NAG1Q8TGN9 163 aa8.54□□□□□ -1.04
PBP1YGR178C CDC39P25655 2108 aaKnown RBP8.54□□□□□ -1.04
PBP1YGR178C RPP2BP02400 110 aaKnown RBP8.54□□□□□ -1.04
PBP1YGR178C MXR2P25566 168 aa8.54□□□□□ -1.04
PBP1YGR178C FMO1P38866 432 aa8.54□□□□□ -1.04
PBP1YGR178C MSY1P48527 492 aa8.54□□□□□ -1.04
PBP1YGR178C YPR147CQ06522 304 aaKnown RBP8.54□□□□□ -1.04
PBP1YGR178C VTS1Q08831 523 aaKnown RBP RIP-Chip data8.54□□□□□ -1.04not detected
PBP1YGR178C CDC36P06100 191 aaPredicted RBP8.53□□□□□ -1.04
PBP1YGR178C YJL193WP39542 402 aa8.53□□□□□ -1.04
PBP1YGR178C OSW5P40219 148 aa8.53□□□□□ -1.04
PBP1YGR178C SEC24P40482 926 aaKnown RBP8.53□□□□□ -1.04
PBP1YGR178C GEP7P53171 287 aa8.53□□□□□ -1.04
PBP1YGR178C PRP11Q07350 266 aaPredicted RBP8.53□□□□□ -1.04
PBP1YGR178C HRD1Q08109 551 aa8.53□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 79 ms