RNA–Protein interactions for RNA: YGL180W

ATG1, Transcript of Protein serine/threonine kinase, yeastyeast

Gene ATG1, Length 2,694 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG1YGL180W YRA2P36036 203 aaKnown RBP RIP-Chip data4□□□□□ -1.77not detected
ATG1YGL180W PHO89P38361 574 aa4□□□□□ -1.77
ATG1YGL180W COS8P38723 381 aa4□□□□□ -1.77
ATG1YGL180W YHL026CP38740 315 aa4□□□□□ -1.77
ATG1YGL180W TDA4P47153 279 aa4□□□□□ -1.77
ATG1YGL180W LSM3P57743 89 aaKnown RBP4□□□□□ -1.77
ATG1YGL180W NKP2Q06162 153 aa4□□□□□ -1.77
ATG1YGL180W FSF1Q12029 327 aaKnown RBP4□□□□□ -1.77
ATG1YGL180W IES3Q12345 250 aa4□□□□□ -1.77
ATG1YGL180W TRM732Q03496 1420 aa4□□□□□ -1.77
ATG1YGL180W SPT15P13393 240 aaKnown RBP4□□□□□ -1.77
ATG1YGL180W SER2P42941 309 aa4□□□□□ -1.77
ATG1YGL180W PRP11Q07350 266 aaPredicted RBP4□□□□□ -1.77
ATG1YGL180W ZEO1Q08245 113 aa4□□□□□ -1.77
ATG1YGL180W THO2P53552 1597 aaKnown RBP4□□□□□ -1.77
ATG1YGL180W CKS1P20486 150 aaKnown RBP3.99□□□□□ -1.77
ATG1YGL180W SEC14P24280 304 aaKnown RBP3.99□□□□□ -1.77
ATG1YGL180W RPS20P38701 121 aaKnown RBP3.99□□□□□ -1.77
ATG1YGL180W VMA7P39111 118 aa3.99□□□□□ -1.77
ATG1YGL180W YDR115WQ04598 105 aa3.99□□□□□ -1.77
ATG1YGL180W SUE1Q06524 206 aa3.99□□□□□ -1.77
ATG1YGL180W DGK1Q12382 290 aa3.99□□□□□ -1.77
ATG1YGL180W ATG22P25568 528 aa3.99□□□□□ -1.77
ATG1YGL180W MEP2P41948 499 aa3.99□□□□□ -1.77
ATG1YGL180W FIP1P45976 327 aa3.99□□□□□ -1.77
ATG1YGL180W COF1Q03048 143 aaKnown RBP3.99□□□□□ -1.77
ATG1YGL180W FCF1Q05498 189 aaPredicted RBP3.99□□□□□ -1.77
ATG1YGL180W YDR278CQ05612 105 aa3.99□□□□□ -1.77
ATG1YGL180W RPL30P14120 105 aaKnown RBP3.98□□□□□ -1.77
ATG1YGL180W STP22P25604 385 aa3.98□□□□□ -1.77
ATG1YGL180W FYV4P38783 130 aaPredicted RBP3.98□□□□□ -1.77
ATG1YGL180W TEM1P38987 245 aa3.98□□□□□ -1.77
ATG1YGL180W HHO1P53551 258 aa3.98□□□□□ -1.77
ATG1YGL180W IRC25Q07951 179 aa3.98□□□□□ -1.77
ATG1YGL180W MNN5P46982 586 aa3.98□□□□□ -1.77
ATG1YGL180W TVP15Q03860 143 aa3.98□□□□□ -1.77
ATG1YGL180W SDH7Q04401 133 aa3.98□□□□□ -1.77
ATG1YGL180W YIR021W-AQ3E739 70 aa3.98□□□□□ -1.77
ATG1YGL180W HTL1Q9URQ5 78 aa3.98□□□□□ -1.77
ATG1YGL180W PCL1P24867 279 aa3.98□□□□□ -1.77
ATG1YGL180W PEX34P25584 144 aa3.98□□□□□ -1.77
ATG1YGL180W PTH1P38876 190 aaKnown RBP3.98□□□□□ -1.77
ATG1YGL180W ASP1P38986 381 aaPredicted RBP3.98□□□□□ -1.77
ATG1YGL180W YFL019CP43576 117 aa3.98□□□□□ -1.77
ATG1YGL180W RPE1P46969 238 aa3.98□□□□□ -1.77
ATG1YGL180W TMA23Q03525 211 aa3.98□□□□□ -1.77
ATG1YGL180W YOL029CQ08187 201 aa3.98□□□□□ -1.77
ATG1YGL180W PAN3P36102 679 aaPredicted RBP3.97□□□□□ -1.77
ATG1YGL180W MRPL24P36525 258 aaPredicted RBP3.97□□□□□ -1.77
ATG1YGL180W ETR1P38071 380 aa3.97□□□□□ -1.77
ATG1YGL180W MAK3Q03503 176 aa3.97□□□□□ -1.77
ATG1YGL180W RAV2Q03956 351 aa3.97□□□□□ -1.77
ATG1YGL180W YDL211CQ12121 372 aa3.97□□□□□ -1.77
ATG1YGL180W TSC3Q3E790 80 aa3.97□□□□□ -1.77
ATG1YGL180W SHE2P36068 246 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
ATG1YGL180W MED6P38782 295 aa3.97□□□□□ -1.77
ATG1YGL180W VTC1P40046 129 aaRIP-Chip data3.97□□□□□ -1.77not detected
ATG1YGL180W DIG2Q03373 323 aaKnown RBP3.97□□□□□ -1.77
ATG1YGL180W VPS71Q03433 280 aa3.97□□□□□ -1.77
ATG1YGL180W CNL1Q06333 122 aa3.97□□□□□ -1.77
ATG1YGL180W RRG7Q08774 242 aaPredicted RBP3.97□□□□□ -1.77
ATG1YGL180W YIL177CP40434 1758 aa3.96□□□□□ -1.77
ATG1YGL180W YJL225CP40889 1758 aa3.96□□□□□ -1.77
ATG1YGL180W YPL073CP40323 161 aa3.96□□□□□ -1.78
ATG1YGL180W DLS1P40366 167 aa3.96□□□□□ -1.78
ATG1YGL180W MIC19P43594 170 aa3.96□□□□□ -1.78
ATG1YGL180W YOR214CQ12282 236 aa3.96□□□□□ -1.78
ATG1YGL180W YER039C-AP0CD97 72 aa3.96□□□□□ -1.78
ATG1YGL180W YLR156WP0CE96 114 aa3.96□□□□□ -1.78
ATG1YGL180W YLR159WP0CE97 114 aa3.96□□□□□ -1.78
ATG1YGL180W YLR161WP0CE98 114 aa3.96□□□□□ -1.78
ATG1YGL180W RPS12P48589 143 aaKnown RBP3.96□□□□□ -1.78
ATG1YGL180W APS2Q00381 147 aa3.96□□□□□ -1.78
ATG1YGL180W ATG39Q06159 398 aa3.96□□□□□ -1.78
ATG1YGL180W GEP5Q12393 293 aa3.96□□□□□ -1.78
ATG1YGL180W VAR1P02381 398 aa3.95□□□□□ -1.78
ATG1YGL180W SPT14P32363 452 aa3.95□□□□□ -1.78
ATG1YGL180W YGR017WP53210 297 aa3.95□□□□□ -1.78
ATG1YGL180W ATP14Q12349 124 aa3.95□□□□□ -1.78
ATG1YGL180W ARO2P28777 376 aaKnown RBP3.95□□□□□ -1.78
ATG1YGL180W IGD1P43598 195 aa3.95□□□□□ -1.78
ATG1YGL180W YFR054CP43622 192 aa3.95□□□□□ -1.78
ATG1YGL180W YLR042CQ07990 161 aa3.95□□□□□ -1.78
ATG1YGL180W YGL194C-AQ2V2P6 80 aa3.95□□□□□ -1.78
ATG1YGL180W YMR230W-AQ3E7B5 62 aa3.95□□□□□ -1.78
ATG1YGL180W RPL9AP05738 191 aaKnown RBP3.94□□□□□ -1.78
ATG1YGL180W RRT13P40042 185 aa3.94□□□□□ -1.78
ATG1YGL180W SNM1P40993 198 aa3.94□□□□□ -1.78
ATG1YGL180W XPT1P47165 209 aa3.94□□□□□ -1.78
ATG1YGL180W DIE2P50076 525 aa3.94□□□□□ -1.78
ATG1YGL180W RPL9BP51401 191 aaKnown RBP3.94□□□□□ -1.78
ATG1YGL180W YOR020W-AQ3E824 90 aa3.94□□□□□ -1.78
ATG1YGL180W YBL059WP34224 193 aa3.94□□□□□ -1.78
ATG1YGL180W PTC1P35182 281 aa3.94□□□□□ -1.78
ATG1YGL180W RPL14AP36105 138 aaKnown RBP3.94□□□□□ -1.78
ATG1YGL180W RPL14BP38754 138 aaKnown RBP3.94□□□□□ -1.78
ATG1YGL180W SFT1P43682 97 aa3.94□□□□□ -1.78
ATG1YGL180W YAE1P47118 141 aaPredicted RBP3.94□□□□□ -1.78
ATG1YGL180W YPL264CQ08980 353 aa3.94□□□□□ -1.78
ATG1YGL180W PAN1P32521 1480 aa3.93□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 48.4 ms