RNA–Protein interactions for RNA: YBL103C

RTG3, Transcript of bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways, yeastyeast

Gene RTG3, Length 1,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTG3YBL103C ATP15P21306 62 aa1.87□□□□□ -2.11
RTG3YBL103C AVT2P39981 480 aa1.87□□□□□ -2.11
RTG3YBL103C GIM4P40005 111 aaKnown RBP1.87□□□□□ -2.11
RTG3YBL103C GPI14P47088 403 aaKnown RBP1.87□□□□□ -2.11
RTG3YBL103C AIF1P52923 378 aa1.87□□□□□ -2.11
RTG3YBL103C TMA20P89886 181 aaPredicted RBP1.87□□□□□ -2.11
RTG3YBL103C SWP1Q02795 286 aa1.87□□□□□ -2.11
RTG3YBL103C YOL014WQ08110 124 aa1.87□□□□□ -2.11
RTG3YBL103C YPR202WQ08993 238 aa1.87□□□□□ -2.11
RTG3YBL103C EFG1Q3E705 233 aaKnown RBP1.87□□□□□ -2.11
RTG3YBL103C TSC3Q3E790 80 aa1.87□□□□□ -2.11
RTG3YBL103C YOR1P53049 1477 aa1.86□□□□□ -2.11
RTG3YBL103C TIM9O74700 87 aa1.86□□□□□ -2.11
RTG3YBL103C CTR2P38865 189 aa1.86□□□□□ -2.11
RTG3YBL103C RFC2P40348 353 aa1.86□□□□□ -2.11
RTG3YBL103C SKI6P46948 246 aaPredicted RBP1.86□□□□□ -2.11
RTG3YBL103C YDR274CP87283 123 aa1.86□□□□□ -2.11
RTG3YBL103C YOR342CQ12182 319 aa1.86□□□□□ -2.11
RTG3YBL103C CCA1P21269 546 aa1.85□□□□□ -2.11
RTG3YBL103C PEX34P25584 144 aa1.85□□□□□ -2.11
RTG3YBL103C OPY1P38271 328 aa1.85□□□□□ -2.11
RTG3YBL103C SER2P42941 309 aa1.85□□□□□ -2.11
RTG3YBL103C MOG1P47123 218 aa1.85□□□□□ -2.11
RTG3YBL103C SOL1P50278 321 aa1.85□□□□□ -2.11
RTG3YBL103C YGL101WP53144 215 aa1.85□□□□□ -2.11
RTG3YBL103C SPG3Q04398 127 aaPredicted RBP1.85□□□□□ -2.11
RTG3YBL103C AKR2Q12013 749 aa1.85□□□□□ -2.11
RTG3YBL103C MSW1P04803 379 aa1.84□□□□□ -2.11
RTG3YBL103C UBI4P0CG63 381 aaKnown RBP1.84□□□□□ -2.11
RTG3YBL103C MRPS28P21771 286 aa1.84□□□□□ -2.11
RTG3YBL103C IDP1P21954 428 aaKnown RBP1.84□□□□□ -2.11
RTG3YBL103C SPO13P23624 291 aa1.84□□□□□ -2.11
RTG3YBL103C UBC8P28263 218 aa1.84□□□□□ -2.11
RTG3YBL103C OCH1P31755 480 aa1.84□□□□□ -2.11
RTG3YBL103C UPS2P35200 230 aa1.84□□□□□ -2.11
RTG3YBL103C MRPL17P36528 281 aa1.84□□□□□ -2.11
RTG3YBL103C FMP23P38231 175 aa1.84□□□□□ -2.11
RTG3YBL103C YEA4P40004 342 aa1.84□□□□□ -2.11
RTG3YBL103C SMD3P43321 101 aaKnown RBP1.84□□□□□ -2.11
RTG3YBL103C EAF6P47128 113 aa1.84□□□□□ -2.11
RTG3YBL103C TDA4P47153 279 aa1.84□□□□□ -2.11
RTG3YBL103C YGL204CP53089 101 aa1.84□□□□□ -2.11
RTG3YBL103C YGR042WP53227 271 aa1.84□□□□□ -2.11
RTG3YBL103C PBI2P0CT04 75 aaKnown RBP1.83□□□□□ -2.12
RTG3YBL103C RPL2AP0CX45 254 aaKnown RBP1.83□□□□□ -2.12
RTG3YBL103C RPL2BP0CX46 254 aaKnown RBP1.83□□□□□ -2.12
RTG3YBL103C NUF2P33895 451 aa1.83□□□□□ -2.12
RTG3YBL103C CSH1P38287 376 aa1.83□□□□□ -2.12
RTG3YBL103C NSG1P38837 291 aa1.83□□□□□ -2.12
RTG3YBL103C CYC2P38909 366 aa1.83□□□□□ -2.12
RTG3YBL103C GVP36P40531 326 aaKnown RBP1.83□□□□□ -2.12
RTG3YBL103C PKR1Q03880 122 aaKnown RBP1.83□□□□□ -2.12
RTG3YBL103C DGK1Q12382 290 aa1.83□□□□□ -2.12
RTG3YBL103C SCM4P32564 187 aa1.82□□□□□ -2.12
RTG3YBL103C PAN3P36102 679 aaPredicted RBP1.82□□□□□ -2.12
RTG3YBL103C YER134CP40081 178 aa1.82□□□□□ -2.12
RTG3YBL103C PGD1P40356 397 aa1.82□□□□□ -2.12
RTG3YBL103C YFL019CP43576 117 aa1.82□□□□□ -2.12
RTG3YBL103C SNX4P47057 423 aa1.82□□□□□ -2.12
RTG3YBL103C TTI2P47168 421 aa1.82□□□□□ -2.12
RTG3YBL103C LSM3P57743 89 aaKnown RBP1.82□□□□□ -2.12
RTG3YBL103C YMR099CQ03161 297 aaKnown RBP1.82□□□□□ -2.12
RTG3YBL103C RAV2Q03956 351 aa1.82□□□□□ -2.12
RTG3YBL103C THI74Q04083 370 aa1.82□□□□□ -2.12
RTG3YBL103C DAS2Q12084 232 aa1.82□□□□□ -2.12
RTG3YBL103C YLR046CQ12253 270 aa1.82□□□□□ -2.12
RTG3YBL103C YDL180WQ12301 547 aa1.82□□□□□ -2.12
RTG3YBL103C CPA1P07258 411 aaKnown RBP1.82□□□□□ -2.12
RTG3YBL103C IPI1P38803 334 aaPredicted RBP1.82□□□□□ -2.12
RTG3YBL103C VTC1P40046 129 aaRIP-Chip data1.82□□□□□ -2.12not detected
RTG3YBL103C APQ12P40532 138 aa1.82□□□□□ -2.12
RTG3YBL103C YJR015WP47090 510 aa1.82□□□□□ -2.12
RTG3YBL103C HHT1P61830 136 aa1.82□□□□□ -2.12
RTG3YBL103C ATO3Q12359 275 aa1.82□□□□□ -2.12
RTG3YBL103C BOL1Q3E793 110 aa1.82□□□□□ -2.12
RTG3YBL103C YAR023CD6VPM8 179 aa1.81□□□□□ -2.12
RTG3YBL103C RPL30P14120 105 aaKnown RBP1.81□□□□□ -2.12
RTG3YBL103C NSP1P14907 823 aaKnown RBP1.81□□□□□ -2.12
RTG3YBL103C SFK1P35735 353 aa1.81□□□□□ -2.12
RTG3YBL103C AYR1P40471 297 aa1.81□□□□□ -2.12
RTG3YBL103C YGR201CP42936 225 aa1.81□□□□□ -2.12
RTG3YBL103C SBH1P52870 82 aa1.81□□□□□ -2.12
RTG3YBL103C ORM1P53224 222 aa1.81□□□□□ -2.12
RTG3YBL103C VPS71Q03433 280 aa1.81□□□□□ -2.12
RTG3YBL103C NAT3Q06504 195 aa1.81□□□□□ -2.12
RTG3YBL103C YLR412C-AQ3E742 68 aa1.81□□□□□ -2.12
RTG3YBL103C ODC2Q99297 307 aa1.81□□□□□ -2.12
RTG3YBL103C POR1P04840 283 aaKnown RBP1.8□□□□□ -2.12
RTG3YBL103C SNC2P33328 115 aa1.8□□□□□ -2.12
RTG3YBL103C CPR5P35176 225 aa1.8□□□□□ -2.12
RTG3YBL103C UMP1P38293 148 aa1.8□□□□□ -2.12
RTG3YBL103C YBR285WP38354 144 aa1.8□□□□□ -2.12
RTG3YBL103C YHR180WP38868 163 aa1.8□□□□□ -2.12
RTG3YBL103C ERJ5P43613 295 aaPredicted RBP1.8□□□□□ -2.12
RTG3YBL103C XPT1P47165 209 aa1.8□□□□□ -2.12
RTG3YBL103C TIM13P53299 105 aa1.8□□□□□ -2.12
RTG3YBL103C NEJ1Q06148 342 aa1.8□□□□□ -2.12
RTG3YBL103C FYV12Q08559 129 aa1.8□□□□□ -2.12
RTG3YBL103C FKS1P38631 1876 aaKnown RBP1.79□□□□□ -2.12
RTG3YBL103C STP22P25604 385 aa1.79□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 42.1 ms