RNA–Protein interactions for RNA: YBL079W

NUP170, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP170, Length 4,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP170YBL079W MPD1Q12404 318 aaKnown RBP1.83□□□□□ -2.12
NUP170YBL079W HFA1P32874 2273 aa1.82□□□□□ -2.12
NUP170YBL079W YCR041WP37265 110 aa1.82□□□□□ -2.12
NUP170YBL079W QDR3P38227 689 aa1.82□□□□□ -2.12
NUP170YBL079W SLM4P38247 162 aa1.82□□□□□ -2.12
NUP170YBL079W RPF1P38805 295 aaKnown RBP1.82□□□□□ -2.12
NUP170YBL079W NSA2P40078 261 aaKnown RBP1.82□□□□□ -2.12
NUP170YBL079W NAS2P40555 220 aa1.82□□□□□ -2.12
NUP170YBL079W SRB7P47822 140 aa1.82□□□□□ -2.12
NUP170YBL079W YIP3P53633 176 aa1.82□□□□□ -2.12
NUP170YBL079W YMR166CQ03829 368 aa1.82□□□□□ -2.12
NUP170YBL079W VAM10Q08474 114 aa1.82□□□□□ -2.12
NUP170YBL079W TIM18Q08749 192 aa1.82□□□□□ -2.12
NUP170YBL079W YPL199CQ08954 240 aa1.82□□□□□ -2.12
NUP170YBL079W LAS17Q12446 633 aa1.82□□□□□ -2.12
NUP170YBL079W PET20Q99373 253 aa1.82□□□□□ -2.12
NUP170YBL079W DPH5P32469 300 aaPredicted RBP1.82□□□□□ -2.12
NUP170YBL079W SEC16P48415 2195 aaKnown RBP1.82□□□□□ -2.12
NUP170YBL079W YML018CQ03730 393 aa1.82□□□□□ -2.12
NUP170YBL079W AEP3Q12089 606 aa1.82□□□□□ -2.12
NUP170YBL079W YPR108W-AQ3E7B3 70 aa1.82□□□□□ -2.12
NUP170YBL079W TAL1P15019 335 aaKnown RBP1.82□□□□□ -2.12
NUP170YBL079W PCL7P40186 285 aa1.82□□□□□ -2.12
NUP170YBL079W SYG1P40528 902 aa1.82□□□□□ -2.12
NUP170YBL079W HXT14P42833 540 aa1.82□□□□□ -2.12
NUP170YBL079W UPS3Q04006 179 aa1.82□□□□□ -2.12
NUP170YBL079W BOL1Q3E793 110 aa1.82□□□□□ -2.12
NUP170YBL079W YNL146C-AQ3E7Z1 64 aa1.82□□□□□ -2.12
NUP170YBL079W AAC1P04710 309 aa1.81□□□□□ -2.12
NUP170YBL079W ECM33P38248 429 aaKnown RBP1.81□□□□□ -2.12
NUP170YBL079W SSO2P39926 295 aa1.81□□□□□ -2.12
NUP170YBL079W MIG3P39943 394 aa1.81□□□□□ -2.12
NUP170YBL079W PCL6P40038 420 aa1.81□□□□□ -2.12
NUP170YBL079W CAT5P41735 233 aa1.81□□□□□ -2.12
NUP170YBL079W WWM1P43582 211 aaKnown RBP1.81□□□□□ -2.12
NUP170YBL079W BXI1P48558 297 aa1.81□□□□□ -2.12
NUP170YBL079W DTD1Q07648 150 aaKnown RBP1.81□□□□□ -2.12
NUP170YBL079W YLR126CQ12288 251 aa1.81□□□□□ -2.12
NUP170YBL079W YPL229WQ99395 206 aa1.81□□□□□ -2.12
NUP170YBL079W SWT21P53873 357 aaPredicted RBP1.81□□□□□ -2.12
NUP170YBL079W YLR042CQ07990 161 aa1.81□□□□□ -2.12
NUP170YBL079W IRC23Q08416 157 aa1.81□□□□□ -2.12
NUP170YBL079W YLR099W-AQ3E798 87 aa1.81□□□□□ -2.12
NUP170YBL079W FMP27Q06179 2628 aa1.81□□□□□ -2.12
NUP170YBL079W HSP12P22943 109 aaKnown RBP1.81□□□□□ -2.12
NUP170YBL079W YAR029WP39549 74 aa1.81□□□□□ -2.12
NUP170YBL079W SIT1P39980 628 aa1.81□□□□□ -2.12
NUP170YBL079W NUP42P49686 430 aaKnown RBP1.81□□□□□ -2.12
NUP170YBL079W SAY1P53324 424 aa1.81□□□□□ -2.12
NUP170YBL079W GIS2P53849 153 aaKnown RBP RIP-Chip data1.81□□□□□ -2.12not detected
NUP170YBL079W YOS1Q3E834 85 aa1.81□□□□□ -2.12
NUP170YBL079W LST8P41318 303 aa1.81□□□□□ -2.12
NUP170YBL079W YJR015WP47090 510 aa1.81□□□□□ -2.12
NUP170YBL079W YGR151CP53287 111 aa1.81□□□□□ -2.12
NUP170YBL079W OCA2P53949 197 aa1.81□□□□□ -2.12
NUP170YBL079W HAL1Q01766 294 aa1.81□□□□□ -2.12
NUP170YBL079W AGE1Q04412 482 aa1.81□□□□□ -2.12
NUP170YBL079W TY1A-BLQ12266 440 aa1.81□□□□□ -2.12
NUP170YBL079W RBD2Q12270 262 aa1.81□□□□□ -2.12
NUP170YBL079W PRP8P33334 2413 aaKnown RBP1.8□□□□□ -2.12
NUP170YBL079W YDR157WA0A023PZE8 133 aa1.8□□□□□ -2.12
NUP170YBL079W TRR1P29509 319 aaKnown RBP1.8□□□□□ -2.12
NUP170YBL079W HOM6P31116 359 aaKnown RBP1.8□□□□□ -2.12
NUP170YBL079W SHB17P36136 271 aaKnown RBP1.8□□□□□ -2.12
NUP170YBL079W ERP1Q05359 219 aaKnown RBP1.8□□□□□ -2.12
NUP170YBL079W CRC1Q12289 327 aa1.8□□□□□ -2.12
NUP170YBL079W QCR2P07257 368 aa1.8□□□□□ -2.12
NUP170YBL079W CUP2P15315 225 aa1.8□□□□□ -2.12
NUP170YBL079W MRS4P23500 304 aa1.8□□□□□ -2.12
NUP170YBL079W SUA5P32579 426 aa1.8□□□□□ -2.12
NUP170YBL079W YBR292CP38357 123 aa1.8□□□□□ -2.12
NUP170YBL079W WSS1P38838 269 aa1.8□□□□□ -2.12
NUP170YBL079W TEM1P38987 245 aa1.8□□□□□ -2.12
NUP170YBL079W CDC40P40968 455 aaPredicted RBP1.8□□□□□ -2.12
NUP170YBL079W YOR385WQ08909 290 aa1.8□□□□□ -2.12
NUP170YBL079W YGK3Q12222 375 aaPredicted RBP1.8□□□□□ -2.12
NUP170YBL079W YHR213W-AQ8TGT4 77 aa1.8□□□□□ -2.12
NUP170YBL079W YEL009C-AA0A023PZF2 135 aa1.8□□□□□ -2.12
NUP170YBL079W CPT1P17898 393 aa1.8□□□□□ -2.12
NUP170YBL079W CNE1P27825 502 aa1.8□□□□□ -2.12
NUP170YBL079W PAN3P36102 679 aaPredicted RBP1.8□□□□□ -2.12
NUP170YBL079W AGE2P40529 298 aa1.8□□□□□ -2.12
NUP170YBL079W KEG1P43614 200 aa1.8□□□□□ -2.12
NUP170YBL079W YMR090WQ04304 227 aaKnown RBP1.8□□□□□ -2.12
NUP170YBL079W YLR224WQ05947 369 aa1.8□□□□□ -2.12
NUP170YBL079W HUT1Q12520 339 aa1.8□□□□□ -2.12
NUP170YBL079W CYC3P06182 269 aa1.79□□□□□ -2.12
NUP170YBL079W PET18P25362 215 aa1.79□□□□□ -2.12
NUP170YBL079W RPB7P34087 171 aa1.79□□□□□ -2.12
NUP170YBL079W NNK1P36003 928 aa1.79□□□□□ -2.12
NUP170YBL079W PEX7P39108 375 aa1.79□□□□□ -2.12
NUP170YBL079W VTS1Q08831 523 aaKnown RBP RIP-Chip data1.79□□□□□ -2.12not detected
NUP170YBL079W YCT1Q12235 531 aa1.79□□□□□ -2.12
NUP170YBL079W PAA1Q12447 191 aaKnown RBP1.79□□□□□ -2.12
NUP170YBL079W HTB2P02294 131 aa1.79□□□□□ -2.12
NUP170YBL079W YJR120WP47157 116 aa1.79□□□□□ -2.12
NUP170YBL079W GPI15P53961 229 aa1.79□□□□□ -2.12
NUP170YBL079W CPR2P23285 205 aa1.79□□□□□ -2.12
NUP170YBL079W SRL3P36167 246 aa1.79□□□□□ -2.12
NUP170YBL079W MRPL27P36526 146 aaPredicted RBP1.79□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms