RNA–Protein interactions for RNA: YBL058W

SHP1, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeastyeast

Gene SHP1, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHP1YBL058W MED8P38304 223 aa4.49□□□□□ -1.69
SHP1YBL058W YDR179W-AQ03983 463 aa4.49□□□□□ -1.69
SHP1YBL058W HRD1Q08109 551 aa4.49□□□□□ -1.69
SHP1YBL058W YNG1Q08465 219 aa4.49□□□□□ -1.69
SHP1YBL058W RPL3P14126 387 aaKnown RBP4.48□□□□□ -1.69
SHP1YBL058W ECM33P38248 429 aaKnown RBP4.48□□□□□ -1.69
SHP1YBL058W MIC12P38341 106 aa4.48□□□□□ -1.69
SHP1YBL058W GOS1P38736 223 aa4.48□□□□□ -1.69
SHP1YBL058W YHR138CP38841 114 aaPredicted RBP4.48□□□□□ -1.69
SHP1YBL058W BOL1Q3E793 110 aa4.48□□□□□ -1.69
SHP1YBL058W VPS63O13549 108 aa4.47□□□□□ -1.69
SHP1YBL058W TRP4P07285 380 aaPredicted RBP4.47□□□□□ -1.69
SHP1YBL058W YCP4P25349 247 aaKnown RBP4.47□□□□□ -1.69
SHP1YBL058W RNP1P32385 249 aa4.47□□□□□ -1.69
SHP1YBL058W HTD2P38790 280 aaKnown RBP4.47□□□□□ -1.69
SHP1YBL058W POP2P39008 433 aa4.47□□□□□ -1.69
SHP1YBL058W ATG18P43601 500 aa4.47□□□□□ -1.69
SHP1YBL058W YFR035CP43608 114 aa4.47□□□□□ -1.69
SHP1YBL058W RPA34P47006 233 aaPredicted RBP4.47□□□□□ -1.69
SHP1YBL058W HAM1P47119 197 aaKnown RBP4.47□□□□□ -1.69
SHP1YBL058W BUL1P48524 976 aa4.47□□□□□ -1.69
SHP1YBL058W CAX4P53223 239 aa4.47□□□□□ -1.69
SHP1YBL058W YML018CQ03730 393 aa4.47□□□□□ -1.69
SHP1YBL058W KEI1Q06346 221 aa4.47□□□□□ -1.69
SHP1YBL058W MCM21Q06675 368 aa4.47□□□□□ -1.69
SHP1YBL058W MED4Q12343 284 aa4.47□□□□□ -1.69
SHP1YBL058W TAR1Q8TGM6 124 aa4.47□□□□□ -1.69
SHP1YBL058W UBA3Q99344 299 aa4.47□□□□□ -1.69
SHP1YBL058W NOP1P15646 327 aaKnown RBP4.46□□□□□ -1.7
SHP1YBL058W TRR1P29509 319 aaKnown RBP4.46□□□□□ -1.7
SHP1YBL058W HOM6P31116 359 aaKnown RBP4.46□□□□□ -1.7
SHP1YBL058W ALK2P32789 676 aaPredicted RBP4.46□□□□□ -1.7
SHP1YBL058W ATP3P38077 311 aaKnown RBP4.46□□□□□ -1.7
SHP1YBL058W NRG2P38082 220 aa4.46□□□□□ -1.7
SHP1YBL058W FMP23P38231 175 aa4.46□□□□□ -1.7
SHP1YBL058W IMD2P38697 523 aaKnown RBP4.46□□□□□ -1.7
SHP1YBL058W LST8P41318 303 aa4.46□□□□□ -1.7
SHP1YBL058W CAT5P41735 233 aa4.46□□□□□ -1.7
SHP1YBL058W YGR210CP42942 411 aa4.46□□□□□ -1.7
SHP1YBL058W CPD1P53314 239 aa4.46□□□□□ -1.7
SHP1YBL058W YLR031WQ07978 186 aa4.46□□□□□ -1.7
SHP1YBL058W VMA8P32610 256 aaKnown RBP4.45□□□□□ -1.7
SHP1YBL058W FMT1P32785 401 aa4.45□□□□□ -1.7
SHP1YBL058W SRL3P36167 246 aa4.45□□□□□ -1.7
SHP1YBL058W YPT31P38555 223 aaKnown RBP4.45□□□□□ -1.7
SHP1YBL058W YER137CP40083 148 aaKnown RBP4.45□□□□□ -1.7
SHP1YBL058W MSE1P48525 536 aa4.45□□□□□ -1.7
SHP1YBL058W VBA1Q04301 562 aa4.45□□□□□ -1.7
SHP1YBL058W PEX10Q05568 337 aa4.45□□□□□ -1.7
SHP1YBL058W NGL1Q08213 363 aaKnown RBP4.45□□□□□ -1.7
SHP1YBL058W PET494P07390 489 aaPredicted RBP4.44□□□□□ -1.7
SHP1YBL058W FRS1P15624 595 aaKnown RBP4.44□□□□□ -1.7
SHP1YBL058W GPX2P38143 162 aa4.44□□□□□ -1.7
SHP1YBL058W ERV29P53337 310 aa4.44□□□□□ -1.7
SHP1YBL058W RAD28Q12021 506 aa4.44□□□□□ -1.7
SHP1YBL058W YPR013CQ12145 317 aa4.44□□□□□ -1.7
SHP1YBL058W SOD1P00445 154 aaKnown RBP4.43□□□□□ -1.7
SHP1YBL058W MIR1P23641 311 aaKnown RBP4.43□□□□□ -1.7
SHP1YBL058W MRPL27P36526 146 aaPredicted RBP4.43□□□□□ -1.7
SHP1YBL058W QDR3P38227 689 aa4.43□□□□□ -1.7
SHP1YBL058W AGX1P43567 385 aa4.43□□□□□ -1.7
SHP1YBL058W YPI1P43587 155 aa4.43□□□□□ -1.7
SHP1YBL058W SSU72P53538 206 aaPredicted RBP4.43□□□□□ -1.7
SHP1YBL058W MEH1Q02205 184 aa4.43□□□□□ -1.7
SHP1YBL058W FSH2Q05015 223 aa4.43□□□□□ -1.7
SHP1YBL058W TRI1Q05024 226 aa4.43□□□□□ -1.7
SHP1YBL058W PEX27Q08580 376 aa4.43□□□□□ -1.7
SHP1YBL058W SUS1Q6WNK7 96 aa4.43□□□□□ -1.7
SHP1YBL058W PET20Q99373 253 aa4.43□□□□□ -1.7
SHP1YBL058W YHR122WP38829 231 aa4.42□□□□□ -1.7
SHP1YBL058W YAR068WP39564 161 aa4.42□□□□□ -1.7
SHP1YBL058W AIM20P40451 204 aa4.42□□□□□ -1.7
SHP1YBL058W DFG10P40526 253 aa4.42□□□□□ -1.7
SHP1YBL058W GVP36P40531 326 aaKnown RBP4.42□□□□□ -1.7
SHP1YBL058W RBL2P48606 106 aaKnown RBP4.42□□□□□ -1.7
SHP1YBL058W CPR8P53728 308 aa4.42□□□□□ -1.7
SHP1YBL058W SYM1Q06563 197 aa4.42□□□□□ -1.7
SHP1YBL058W YOR283WQ12040 230 aaKnown RBP4.42□□□□□ -1.7
SHP1YBL058W DCP1Q12517 231 aaPredicted RBP4.42□□□□□ -1.7
SHP1YBL058W CAP2P13517 287 aa4.41□□□□□ -1.7
SHP1YBL058W ARP3P47117 449 aaKnown RBP4.41□□□□□ -1.7
SHP1YBL058W ALG13P53178 202 aa4.41□□□□□ -1.7
SHP1YBL058W SWT21P53873 357 aaPredicted RBP4.41□□□□□ -1.7
SHP1YBL058W GIM3P53900 129 aa4.41□□□□□ -1.7
SHP1YBL058W ERV25P54837 211 aaKnown RBP4.41□□□□□ -1.7
SHP1YBL058W THI74Q04083 370 aa4.41□□□□□ -1.7
SHP1YBL058W MGR3Q04472 501 aa4.41□□□□□ -1.7
SHP1YBL058W RDS3Q06835 107 aaPredicted RBP4.41□□□□□ -1.7
SHP1YBL058W ATG31Q12421 196 aa4.41□□□□□ -1.7
SHP1YBL058W YBR255C-AQ3E776 120 aa4.41□□□□□ -1.7
SHP1YBL058W MRS3P10566 314 aa4.4□□□□□ -1.71
SHP1YBL058W POP8P38208 133 aa4.4□□□□□ -1.71
SHP1YBL058W DOG2P38773 246 aa4.4□□□□□ -1.71
SHP1YBL058W DOG1P38774 246 aa4.4□□□□□ -1.71
SHP1YBL058W IES5P40060 125 aa4.4□□□□□ -1.71
SHP1YBL058W SIM1P40472 476 aa4.4□□□□□ -1.71
SHP1YBL058W TMA20P89886 181 aaPredicted RBP4.4□□□□□ -1.71
SHP1YBL058W RRG8Q06109 277 aa4.4□□□□□ -1.71
SHP1YBL058W SCP1Q08873 200 aa4.4□□□□□ -1.71
SHP1YBL058W ATG5Q12380 294 aa4.4□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 36 ms