RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 YFR054CP43622 192 aa4.59□□□□□ -1.67
NME1NME1 TDA4P47153 279 aa4.59□□□□□ -1.67
NME1NME1 BAT2P47176 376 aaKnown RBP4.59□□□□□ -1.67
NME1NME1 YMR315WQ04869 349 aaKnown RBP4.59□□□□□ -1.67
NME1NME1 ANT1Q06497 328 aa4.59□□□□□ -1.67
NME1NME1 YML100W-AQ8TGT0 57 aa4.59□□□□□ -1.67
NME1NME1 YAR023CD6VPM8 179 aa4.58□□□□□ -1.68
NME1NME1 RPS24AP0CX31 135 aaKnown RBP4.58□□□□□ -1.68
NME1NME1 RPS24BP0CX32 135 aaKnown RBP4.58□□□□□ -1.68
NME1NME1 MPC3P53311 146 aa4.58□□□□□ -1.68
NME1NME1 CUE4Q04201 117 aaPredicted RBP4.58□□□□□ -1.68
NME1NME1 BRX1Q08235 291 aaKnown RBP4.58□□□□□ -1.68
NME1NME1 YBR219CP38317 127 aa4.57□□□□□ -1.68
NME1NME1 YIP3P53633 176 aa4.57□□□□□ -1.68
NME1NME1 YMR099CQ03161 297 aaKnown RBP4.57□□□□□ -1.68
NME1NME1 TMA19P35691 167 aaKnown RBP4.56□□□□□ -1.68
NME1NME1 SRP14P38985 146 aa4.56□□□□□ -1.68
NME1NME1 MTW1P39731 289 aa4.56□□□□□ -1.68
NME1NME1 KNH1P50112 268 aa4.56□□□□□ -1.68
NME1NME1 POP3P53833 195 aaPredicted RBP4.56□□□□□ -1.68
NME1NME1 SPO13P23624 291 aa4.55□□□□□ -1.68
NME1NME1 AHC2P25649 128 aa4.55□□□□□ -1.68
NME1NME1 YKR041WP36134 250 aa4.55□□□□□ -1.68
NME1NME1 TVP23P38962 199 aa4.55□□□□□ -1.68
NME1NME1 PGA1P53896 198 aa4.55□□□□□ -1.68
NME1NME1 YMR295CQ03559 197 aa4.55□□□□□ -1.68
NME1NME1 GIM5Q04493 163 aa4.55□□□□□ -1.68
NME1NME1 MGT1P26188 188 aa4.54□□□□□ -1.68
NME1NME1 SHH4Q06236 168 aa4.54□□□□□ -1.68
NME1NME1 RPL35AP0CX84 120 aaKnown RBP4.53□□□□□ -1.68
NME1NME1 RPL35BP0CX85 120 aaKnown RBP4.53□□□□□ -1.68
NME1NME1 YLR460CP54007 376 aa4.53□□□□□ -1.68
NME1NME1 RAD28Q12021 506 aa4.53□□□□□ -1.68
NME1NME1 VPS51P36116 164 aa4.52□□□□□ -1.69
NME1NME1 YER034WP40022 185 aaKnown RBP4.52□□□□□ -1.69
NME1NME1 YOR342CQ12182 319 aa4.52□□□□□ -1.69
NME1NME1 MPD1Q12404 318 aaKnown RBP4.52□□□□□ -1.69
NME1NME1 CMC2Q3E7A4 109 aa4.52□□□□□ -1.69
NME1NME1 SEC14P24280 304 aaKnown RBP4.51□□□□□ -1.69
NME1NME1 NVJ1P38881 321 aa4.51□□□□□ -1.69
NME1NME1 JAC1P53193 184 aa4.51□□□□□ -1.69
NME1NME1 NAT3Q06504 195 aa4.51□□□□□ -1.69
NME1NME1 CLG1P35190 452 aa4.5□□□□□ -1.69
NME1NME1 SEC11P15367 167 aa4.49□□□□□ -1.69
NME1NME1 YER076CP40049 302 aa4.49□□□□□ -1.69
NME1NME1 YER135CP40082 130 aa4.49□□□□□ -1.69
NME1NME1 YNL247WP53852 767 aaKnown RBP4.49□□□□□ -1.69
NME1NME1 MAK5P38112 773 aaPredicted RBP4.48□□□□□ -1.69
NME1NME1 NSG1P38837 291 aa4.48□□□□□ -1.69
NME1NME1 YFL019CP43576 117 aa4.48□□□□□ -1.69
NME1NME1 VPS71Q03433 280 aa4.48□□□□□ -1.69
NME1NME1 HPT1Q04178 221 aaKnown RBP4.48□□□□□ -1.69
NME1NME1 YLR162WQ06235 118 aa4.48□□□□□ -1.69
NME1NME1 YKL102CP34249 101 aa4.47□□□□□ -1.69
NME1NME1 ECM4P36156 370 aa4.47□□□□□ -1.69
NME1NME1 GPI17Q04080 534 aa4.47□□□□□ -1.69
NME1NME1 ARO7P32178 256 aa4.46□□□□□ -1.7
NME1NME1 VMA22P38784 181 aa4.46□□□□□ -1.7
NME1NME1 SHH3Q04487 196 aa4.46□□□□□ -1.7
NME1NME1 CSI2Q08054 341 aa4.46□□□□□ -1.7
NME1NME1 YLR412C-AQ3E742 68 aa4.46□□□□□ -1.7
NME1NME1 YOL162WP0CF19 215 aa4.45□□□□□ -1.7
NME1NME1 RAD51P25454 400 aa4.45□□□□□ -1.7
NME1NME1 GPI14P47088 403 aaKnown RBP4.45□□□□□ -1.7
NME1NME1 IRC23Q08416 157 aa4.45□□□□□ -1.7
NME1NME1 PEX11Q12462 236 aa4.45□□□□□ -1.7
NME1NME1 NSP1P14907 823 aaKnown RBP4.44□□□□□ -1.7
NME1NME1 CUP9P41817 306 aa4.44□□□□□ -1.7
NME1NME1 YDL180WQ12301 547 aa4.44□□□□□ -1.7
NME1NME1 YKR045CP36138 183 aa4.43□□□□□ -1.7
NME1NME1 YLR050CQ12155 161 aaKnown RBP4.43□□□□□ -1.7
NME1NME1 TIR1P10863 254 aa4.42□□□□□ -1.7
NME1NME1 RPL13BP40212 199 aaKnown RBP4.42□□□□□ -1.7
NME1NME1 YNL140CP53910 189 aa4.42□□□□□ -1.7
NME1NME1 YPR174CQ06616 221 aaPredicted RBP4.42□□□□□ -1.7
NME1NME1 RPL13AQ12690 199 aaPredicted RBP4.42□□□□□ -1.7
NME1NME1 YGL010WP25338 174 aa4.41□□□□□ -1.7
NME1NME1 TVP38P36164 337 aa4.41□□□□□ -1.7
NME1NME1 YPL073CP40323 161 aa4.4□□□□□ -1.71
NME1NME1 DGK1Q12382 290 aa4.4□□□□□ -1.71
NME1NME1 PAM17P36147 197 aa4.39□□□□□ -1.71
NME1NME1 PLP1Q04004 230 aa4.39□□□□□ -1.71
NME1NME1 YMR253CQ04835 414 aa4.39□□□□□ -1.71
NME1NME1 SPC25P40014 221 aa4.38□□□□□ -1.71
NME1NME1 RFC2P40348 353 aa4.38□□□□□ -1.71
NME1NME1 GPA2P10823 449 aa4.37□□□□□ -1.71
NME1NME1 YBR220CP38318 560 aa4.37□□□□□ -1.71
NME1NME1 PHO85P17157 305 aa4.36□□□□□ -1.71
NME1NME1 DIG2Q03373 323 aaKnown RBP4.36□□□□□ -1.71
NME1NME1 YHR007C-AQ07074 71 aa4.36□□□□□ -1.71
NME1NME1 QCR8P08525 94 aa4.34□□□□□ -1.71
NME1NME1 IDP1P21954 428 aaKnown RBP4.34□□□□□ -1.71
NME1NME1 UPS2P35200 230 aa4.34□□□□□ -1.71
NME1NME1 YNL033WP53964 284 aa4.34□□□□□ -1.71
NME1NME1 NSA2P40078 261 aaKnown RBP4.33□□□□□ -1.72
NME1NME1 PRP11Q07350 266 aaPredicted RBP4.33□□□□□ -1.72
NME1NME1 CMD1P06787 147 aaKnown RBP4.32□□□□□ -1.72
NME1NME1 SBH1P52870 82 aa4.32□□□□□ -1.72
NME1NME1 YPR013CQ12145 317 aa4.32□□□□□ -1.72
NME1NME1 RPL2AP0CX45 254 aaKnown RBP4.31□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 48.6 ms