RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Krt2Q3TTY5 707 aa14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Olfml2bQ3V1G4 746 aa14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Nr2c1Q505F1 590 aa14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Ssxb10Q6XAR7 170 aa14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Clptm1Q8VBZ3 664 aa14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Ascc2Q91WR3 749 aa14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Noxred1Q9D3S5 366 aa14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Tube1Q9D6T1 475 aa14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Mapk13Q9Z1B7 366 aa14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Gm13023A2A8N2 498 aa14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Serpina1aP07758 413 aa14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Serpina1cQ00896 412 aa14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Serpina1dQ00897 413 aa14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Klra9Q2TJJ8 266 aa14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Ttbk2Q3UVR3 1243 aa14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Thrap3Q569Z6 951 aaKnown RBP14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Syce1lQ5D525 247 aa14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Pphln1Q8K2H1 381 aaKnown RBP14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Nol6Q8R5K4 1152 aaKnown RBP14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 LrmdaQ9D9B4 229 aa14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Zscan4-ps3A0A1B0GRH6 506 aa14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Zscan4-ps2A0A1C7CYU6 506 aa14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Serpinb9O08797 374 aa14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Gnat1P20612 350 aa14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 RalaP63321 206 aa14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 PrkcbP68404 671 aa14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Als2clQ60I26 952 aa14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Ddx3xQ62167 662 aaKnown RBP14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Nlrp9bQ66X22 1003 aa14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Fam120bQ6RI63 786 aa14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Pomgnt2Q8BW41 605 aa14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Tulp4Q9JIL5 1547 aa14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 AK157302I3ITR1 129 aa14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Klf6O08584 283 aa14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Rab17P35292 214 aa14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 LtbrP50284 415 aa14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Gspt2Q149F3 632 aa14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 XpaQ64267 272 aa14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Egfl8Q6GUQ1 293 aa14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Lrfn2Q80TG9 788 aa14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Klhl31Q8BWA5 634 aa14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Fuca2Q99KR8 461 aa14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Lpin2Q99PI5 893 aa14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Trim12aQ99PQ1 284 aa14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Isca1Q9D924 129 aa14.59□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Wee1P47810 646 aa14.58□□□□□ -0.07
Col3a1-201ENSMUST00000087883 CybbQ61093 570 aa14.58□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Cyp3a13Q64464 503 aa14.58□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Smarca1Q6PGB8 1046 aa14.58□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Gcfc2Q8BKT3 769 aa14.58□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Smtnl2Q8CI12 456 aa14.58□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Sf3b3Q921M3 1217 aaKnown RBP14.58□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Trpv2Q9WTR1 756 aa14.58□□□□□ -0.07
Col3a1-201ENSMUST00000087883 Efna5O08543 228 aa14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 S100a6P14069 89 aa14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 CnpP16330 420 aa14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 ProcP33587 460 aa14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Tlx1P43345 332 aa14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Kcna5Q61762 602 aa14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Trim62Q80V85 475 aa14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Pgs1Q8BHF7 553 aa14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Slc38a7Q8BWH0 463 aa14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Agap1Q8BXK8 857 aaKnown RBP14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Ccdc137Q8R0K4 290 aaKnown RBP14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Guca1bQ8VBV8 201 aa14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Bbs2Q9CWF6 721 aa14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Uggt1Q6P5E4 1551 aa14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Msh2P43247 935 aaKnown RBP14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Adad1Q5SUE7 619 aa14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Mapk4Q6P5G0 583 aa14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Vmn2r43Q80Z08 845 aa14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Smim5Q8BT42 78 aa14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Q8CIL4 281 aa14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Appl1Q8K3H0 707 aa14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Mtss1Q8R1S4 759 aa14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Rnf103Q9R1W3 683 aa14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Cdhr2E9Q7P9 1308 aa14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Adcy1O88444 1118 aa14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 PolgP54099 1218 aa14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 McuQ3UMR5 350 aa14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Gpr162Q3UN16 588 aa14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Tmem247Q497K7 211 aa14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Ddx5Q61656 614 aaKnown RBP14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Xpo1Q6P5F9 1071 aaKnown RBP14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Naif1Q6PFD7 327 aa14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Peg10Q7TN75 958 aaKnown RBP14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Prr33Q8C494 260 aa14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Gtse1Q8R080 741 aa14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Ccdc81Q9D5W4 654 aa14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Styxl1Q9DAR2 321 aa14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 M1apQ9Z0E1 529 aa14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Myo3aQ8K3H5 1613 aa14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Synj2Q9D2G5 1434 aa14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 FaxcQ3UMF9 409 aa14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Ano5Q75UR0 904 aa14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Pdia6Q922R8 440 aaKnown RBP14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Tbx18Q9EPZ6 613 aa14.58□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Ccdc51Q3URS9 406 aa14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Garnl3Q3V0G7 1038 aa14.57□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Cep295nlQ497N6 533 aa14.57□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 24.8 ms