RNA–Protein interactions for RNA: YNR023W

SNF12, Transcript of 73 kDa subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF12, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF12YNR023W YHR022CP38763 256 aa1.54□□□□□ -2.16
SNF12YNR023W AYR1P40471 297 aa1.54□□□□□ -2.16
SNF12YNR023W YRB2P40517 327 aa1.54□□□□□ -2.16
SNF12YNR023W RPL27AP0C2H6 136 aaKnown RBP1.54□□□□□ -2.16
SNF12YNR023W RPL27BP0C2H7 136 aaKnown RBP1.54□□□□□ -2.16
SNF12YNR023W URA5P13298 226 aaKnown RBP1.54□□□□□ -2.16
SNF12YNR023W BET1P22804 142 aa1.54□□□□□ -2.16
SNF12YNR023W PTM1P32857 523 aa1.54□□□□□ -2.16
SNF12YNR023W UTP30P36144 274 aaKnown RBP1.54□□□□□ -2.16
SNF12YNR023W UMP1P38293 148 aa1.54□□□□□ -2.16
SNF12YNR023W TIR3P40552 269 aa1.54□□□□□ -2.16
SNF12YNR023W COG5P53951 403 aa1.54□□□□□ -2.16
SNF12YNR023W CYT2Q00873 224 aa1.54□□□□□ -2.16
SNF12YNR023W PET191Q02772 108 aa1.54□□□□□ -2.16
SNF12YNR023W YDR249CQ03787 373 aa1.54□□□□□ -2.16
SNF12YNR023W YPL162CQ12042 273 aa1.54□□□□□ -2.16
SNF12YNR023W MCP1Q12106 302 aa1.54□□□□□ -2.16
SNF12YNR023W RAS2P01120 322 aaKnown RBP1.53□□□□□ -2.16
SNF12YNR023W DDI2P0CH63 225 aa1.53□□□□□ -2.16
SNF12YNR023W DDI3P0CH64 225 aa1.53□□□□□ -2.16
SNF12YNR023W SNC2P33328 115 aa1.53□□□□□ -2.16
SNF12YNR023W MRPL17P36528 281 aa1.53□□□□□ -2.16
SNF12YNR023W DSE2P38844 325 aa1.53□□□□□ -2.16
SNF12YNR023W HMF1P40037 129 aaKnown RBP1.53□□□□□ -2.16
SNF12YNR023W VTC1P40046 129 aaRIP-Chip data1.53□□□□□ -2.16not detected
SNF12YNR023W PEP8P40335 379 aa1.53□□□□□ -2.16
SNF12YNR023W SPG3Q04398 127 aaPredicted RBP1.53□□□□□ -2.16
SNF12YNR023W YCL012CQ8J0M4 134 aa1.53□□□□□ -2.16
SNF12YNR023W YHR214C-EQ8TGK0 99 aa1.53□□□□□ -2.16
SNF12YNR023W TIM9O74700 87 aa1.52□□□□□ -2.17
SNF12YNR023W YPK2P18961 677 aa1.52□□□□□ -2.17
SNF12YNR023W MDH2P22133 377 aa1.52□□□□□ -2.17
SNF12YNR023W YET1P35723 206 aa1.52□□□□□ -2.17
SNF12YNR023W GVP36P40531 326 aaKnown RBP1.52□□□□□ -2.17
SNF12YNR023W DOC1P53068 250 aa1.52□□□□□ -2.17
SNF12YNR023W MMS2P53152 137 aa1.52□□□□□ -2.17
SNF12YNR023W NOP19P53317 196 aaPredicted RBP1.52□□□□□ -2.17
SNF12YNR023W QCR7P00128 127 aa1.52□□□□□ -2.17
SNF12YNR023W RPB3P16370 318 aaKnown RBP1.52□□□□□ -2.17
SNF12YNR023W YNG1Q08465 219 aa1.52□□□□□ -2.17
SNF12YNR023W GPM2Q12008 311 aa1.52□□□□□ -2.17
SNF12YNR023W CKS1P20486 150 aaKnown RBP1.51□□□□□ -2.17
SNF12YNR023W YNL217WP40152 326 aa1.51□□□□□ -2.17
SNF12YNR023W AGE2P40529 298 aa1.51□□□□□ -2.17
SNF12YNR023W BOL2P53082 120 aa1.51□□□□□ -2.17
SNF12YNR023W GIM3P53900 129 aa1.51□□□□□ -2.17
SNF12YNR023W BUD25P85052 153 aa1.51□□□□□ -2.17
SNF12YNR023W DOP1Q03921 1698 aa1.51□□□□□ -2.17
SNF12YNR023W YFR032C-BQ8TGU2 87 aa1.51□□□□□ -2.17
SNF12YNR023W DNF3Q12674 1656 aa1.5□□□□□ -2.17
SNF12YNR023W SCC2Q04002 1493 aa1.5□□□□□ -2.17
SNF12YNR023W IKI3Q06706 1349 aaKnown RBP1.5□□□□□ -2.17
SNF12YNR023W ASF2P32448 525 aaPredicted RBP1.5□□□□□ -2.17
SNF12YNR023W YBR285WP38354 144 aa1.5□□□□□ -2.17
SNF12YNR023W AIM25P47140 327 aa1.5□□□□□ -2.17
SNF12YNR023W GGA1Q06336 557 aa1.5□□□□□ -2.17
SNF12YNR023W YOL160WQ08321 113 aa1.5□□□□□ -2.17
SNF12YNR023W FSF1Q12029 327 aaKnown RBP1.5□□□□□ -2.17
SNF12YNR023W TOR1P35169 2470 aa1.5□□□□□ -2.17
SNF12YNR023W YRF1-1P0CX20 1796 aa1.5□□□□□ -2.17
SNF12YNR023W YRF1-5P0CX21 1796 aa1.5□□□□□ -2.17
SNF12YNR023W YRF1-8P0CX22 1796 aa1.5□□□□□ -2.17
SNF12YNR023W UFD4P33202 1483 aa1.5□□□□□ -2.17
SNF12YNR023W SHE2P36068 246 aaKnown RBP RIP-Chip data1.49□□□□□ -2.17not detected
SNF12YNR023W AVT2P39981 480 aa1.49□□□□□ -2.17
SNF12YNR023W HNT1Q04344 158 aaKnown RBP1.49□□□□□ -2.17
SNF12YNR023W SML1Q04964 104 aa1.49□□□□□ -2.17
SNF12YNR023W FUS2Q05670 677 aa1.49□□□□□ -2.17
SNF12YNR023W NUP170P38181 1502 aa1.49□□□□□ -2.17
SNF12YNR023W RAD9P14737 1309 aa1.49□□□□□ -2.17
SNF12YNR023W SIR2P06700 562 aa1.49□□□□□ -2.17
SNF12YNR023W MRS1P07266 363 aa1.49□□□□□ -2.17
SNF12YNR023W CNB1P25296 175 aa1.49□□□□□ -2.17
SNF12YNR023W FZF1P32805 299 aa1.49□□□□□ -2.17
SNF12YNR023W GLE2P40066 365 aa1.49□□□□□ -2.17
SNF12YNR023W BAT2P47176 376 aaKnown RBP1.49□□□□□ -2.17
SNF12YNR023W CUP1-1P0CX80 61 aa1.48□□□□□ -2.17
SNF12YNR023W CUP1-2P0CX81 61 aa1.48□□□□□ -2.17
SNF12YNR023W ATP15P21306 62 aa1.48□□□□□ -2.17
SNF12YNR023W YBR209WP38311 105 aa1.48□□□□□ -2.17
SNF12YNR023W ERG10P41338 398 aaKnown RBP1.48□□□□□ -2.17
SNF12YNR023W SAY1P53324 424 aa1.48□□□□□ -2.17
SNF12YNR023W RTC4P53850 401 aa1.48□□□□□ -2.17
SNF12YNR023W RIO1Q12196 484 aaKnown RBP1.48□□□□□ -2.17
SNF12YNR023W PDR10P51533 1564 aa1.48□□□□□ -2.17
SNF12YNR023W BEM2P39960 2167 aaKnown RBP1.47□□□□□ -2.17
SNF12YNR023W ADE1P27616 306 aa1.47□□□□□ -2.17
SNF12YNR023W CAF4P36130 643 aa1.47□□□□□ -2.17
SNF12YNR023W LSM4P40070 187 aaKnown RBP1.47□□□□□ -2.17
SNF12YNR023W EAF6P47128 113 aa1.47□□□□□ -2.17
SNF12YNR023W YNR077CP53758 84 aa1.47□□□□□ -2.17
SNF12YNR023W YDR274CP87283 123 aa1.47□□□□□ -2.17
SNF12YNR023W ATG40Q99325 256 aa1.47□□□□□ -2.17
SNF12YNR023W HAP1P0CE41 1502 aa1.47□□□□□ -2.17
SNF12YNR023W NUP159P40477 1460 aa1.47□□□□□ -2.17
SNF12YNR023W TRM3Q07527 1436 aa1.47□□□□□ -2.17
SNF12YNR023W ARO1P08566 1588 aaKnown RBP1.47□□□□□ -2.17
SNF12YNR023W YIL177CP40434 1758 aa1.47□□□□□ -2.17
SNF12YNR023W YJL225CP40889 1758 aa1.47□□□□□ -2.17
SNF12YNR023W GDB1Q06625 1536 aa1.46□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 89.2 ms