RNA–Protein interactions for RNA: YML103C

NUP188, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP188, Length 4,968 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP188YML103C YET1P35723 206 aa0.94□□□□□ -2.26
NUP188YML103C SRY1P36007 326 aa0.94□□□□□ -2.26
NUP188YML103C YKE4P40544 346 aa0.94□□□□□ -2.26
NUP188YML103C RPL33BP41056 107 aaKnown RBP0.94□□□□□ -2.26
NUP188YML103C YDR249CQ03787 373 aa0.94□□□□□ -2.26
NUP188YML103C SPG3Q04398 127 aaPredicted RBP0.94□□□□□ -2.26
NUP188YML103C CDD1Q06549 142 aa0.94□□□□□ -2.26
NUP188YML103C YPD1Q07688 167 aa0.94□□□□□ -2.26
NUP188YML103C YOL024WQ08172 172 aa0.94□□□□□ -2.26
NUP188YML103C YOR342CQ12182 319 aa0.94□□□□□ -2.26
NUP188YML103C TDA8Q6B2U8 126 aa0.94□□□□□ -2.26
NUP188YML103C YCL012CQ8J0M4 134 aa0.94□□□□□ -2.26
NUP188YML103C MRS1P07266 363 aa0.94□□□□□ -2.26
NUP188YML103C KRE1P17260 313 aa0.94□□□□□ -2.26
NUP188YML103C TAH1P25638 111 aaPredicted RBP0.94□□□□□ -2.26
NUP188YML103C UTR5P32630 166 aa0.94□□□□□ -2.26
NUP188YML103C MRPS8Q03799 155 aa0.94□□□□□ -2.26
NUP188YML103C MPD1Q12404 318 aaKnown RBP0.94□□□□□ -2.26
NUP188YML103C ATG40Q99325 256 aa0.94□□□□□ -2.26
NUP188YML103C RAD9P14737 1309 aa0.94□□□□□ -2.26
NUP188YML103C RPL35AP0CX84 120 aaKnown RBP0.94□□□□□ -2.26
NUP188YML103C RPL35BP0CX85 120 aaKnown RBP0.94□□□□□ -2.26
NUP188YML103C AHC2P25649 128 aa0.94□□□□□ -2.26
NUP188YML103C AGA2P32781 87 aa0.94□□□□□ -2.26
NUP188YML103C UBC6P33296 250 aaPredicted RBP0.94□□□□□ -2.26
NUP188YML103C MNN5P46982 586 aa0.94□□□□□ -2.26
NUP188YML103C AIF1P52923 378 aa0.94□□□□□ -2.26
NUP188YML103C PGA1P53896 198 aa0.94□□□□□ -2.26
NUP188YML103C APJ1P53940 528 aa0.94□□□□□ -2.26
NUP188YML103C FSF1Q12029 327 aaKnown RBP0.94□□□□□ -2.26
NUP188YML103C YPL162CQ12042 273 aa0.94□□□□□ -2.26
NUP188YML103C GCY1P14065 312 aaKnown RBP RIP-Chip data0.94□□□□□ -2.26not detected
NUP188YML103C RPC19P28000 142 aaKnown RBP0.94□□□□□ -2.26
NUP188YML103C GVP36P40531 326 aaKnown RBP0.94□□□□□ -2.26
NUP188YML103C NOC4Q06512 552 aaPredicted RBP0.94□□□□□ -2.26
NUP188YML103C IGO2Q9P305 131 aa0.94□□□□□ -2.26
NUP188YML103C PBI2P0CT04 75 aaKnown RBP0.93□□□□□ -2.26
NUP188YML103C PEX4P29340 183 aa0.93□□□□□ -2.26
NUP188YML103C NSG1P38837 291 aa0.93□□□□□ -2.26
NUP188YML103C ERG10P41338 398 aaKnown RBP0.93□□□□□ -2.26
NUP188YML103C GLR1P41921 483 aaKnown RBP0.93□□□□□ -2.26
NUP188YML103C SNX4P47057 423 aa0.93□□□□□ -2.26
NUP188YML103C TIM13P53299 105 aa0.93□□□□□ -2.26
NUP188YML103C CGI121Q03705 181 aaKnown RBP0.93□□□□□ -2.26
NUP188YML103C YLR179CQ06252 201 aaKnown RBP0.93□□□□□ -2.26
NUP188YML103C ARR2Q06597 130 aa0.93□□□□□ -2.26
NUP188YML103C BOL1Q3E793 110 aa0.93□□□□□ -2.26
NUP188YML103C MSA2P36157 363 aa0.93□□□□□ -2.26
NUP188YML103C SDH4P37298 181 aa0.93□□□□□ -2.26
NUP188YML103C SAY1P53324 424 aa0.93□□□□□ -2.26
NUP188YML103C AIM34Q03673 198 aa0.93□□□□□ -2.26
NUP188YML103C BRX1Q08235 291 aaKnown RBP0.93□□□□□ -2.26
NUP188YML103C YLR156WP0CE96 114 aa0.93□□□□□ -2.26
NUP188YML103C YLR159WP0CE97 114 aa0.93□□□□□ -2.26
NUP188YML103C YLR161WP0CE98 114 aa0.93□□□□□ -2.26
NUP188YML103C RPS23AP0CX29 145 aaKnown RBP0.93□□□□□ -2.26
NUP188YML103C RPS23BP0CX30 145 aa0.93□□□□□ -2.26
NUP188YML103C CLG1P35190 452 aa0.93□□□□□ -2.26
NUP188YML103C CTR2P38865 189 aa0.93□□□□□ -2.26
NUP188YML103C VTC1P40046 129 aaRIP-Chip data0.93□□□□□ -2.26not detected
NUP188YML103C AIM25P47140 327 aa0.93□□□□□ -2.26
NUP188YML103C DOC1P53068 250 aa0.93□□□□□ -2.26
NUP188YML103C ARO80Q04052 950 aa0.93□□□□□ -2.26
NUP188YML103C TRM12Q04235 462 aa0.93□□□□□ -2.26
NUP188YML103C MCP1Q12106 302 aa0.93□□□□□ -2.26
NUP188YML103C TAF2P23255 1407 aa0.93□□□□□ -2.26
NUP188YML103C MDH2P22133 377 aa0.93□□□□□ -2.26
NUP188YML103C OCH1P31755 480 aa0.93□□□□□ -2.26
NUP188YML103C NVJ1P38881 321 aa0.93□□□□□ -2.26
NUP188YML103C YEA4P40004 342 aa0.93□□□□□ -2.26
NUP188YML103C UBC12P52491 188 aa0.93□□□□□ -2.26
NUP188YML103C SHH4Q06236 168 aa0.93□□□□□ -2.26
NUP188YML103C SRP102P36057 244 aaPredicted RBP0.92□□□□□ -2.26
NUP188YML103C ERV15P38312 142 aa0.92□□□□□ -2.26
NUP188YML103C YHR180WP38868 163 aa0.92□□□□□ -2.26
NUP188YML103C CIS3P47001 227 aa0.92□□□□□ -2.26
NUP188YML103C CAB4P53332 305 aa0.92□□□□□ -2.26
NUP188YML103C CUE4Q04201 117 aaPredicted RBP0.92□□□□□ -2.26
NUP188YML103C YPR127WQ06494 345 aa0.92□□□□□ -2.26
NUP188YML103C PEX11Q12462 236 aa0.92□□□□□ -2.26
NUP188YML103C YOR062CP36025 268 aa0.92□□□□□ -2.26
NUP188YML103C MRPL17P36528 281 aa0.92□□□□□ -2.26
NUP188YML103C FMP23P38231 175 aa0.92□□□□□ -2.26
NUP188YML103C SER2P42941 309 aa0.92□□□□□ -2.26
NUP188YML103C MOG1P47123 218 aa0.92□□□□□ -2.26
NUP188YML103C ARO8P53090 500 aaKnown RBP0.92□□□□□ -2.26
NUP188YML103C BUD25P85052 153 aa0.92□□□□□ -2.26
NUP188YML103C VPS71Q03433 280 aa0.92□□□□□ -2.26
NUP188YML103C YMR295CQ03559 197 aa0.92□□□□□ -2.26
NUP188YML103C GPI17Q04080 534 aa0.92□□□□□ -2.26
NUP188YML103C EFG1Q3E705 233 aaKnown RBP0.92□□□□□ -2.26
NUP188YML103C TIM9O74700 87 aa0.92□□□□□ -2.26
NUP188YML103C ARO7P32178 256 aa0.92□□□□□ -2.26
NUP188YML103C KDX1P36005 433 aa0.92□□□□□ -2.26
NUP188YML103C PAN3P36102 679 aaPredicted RBP0.92□□□□□ -2.26
NUP188YML103C LSM1P47017 172 aaKnown RBP0.92□□□□□ -2.26
NUP188YML103C MSA1Q08471 629 aa0.92□□□□□ -2.26
NUP188YML103C YPL229WQ99395 206 aa0.92□□□□□ -2.26
NUP188YML103C TRX3P25372 127 aa0.91□□□□□ -2.26
NUP188YML103C NSA2P40078 261 aaKnown RBP0.91□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 43 ms