RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W YEA6P39953 335 aa8.26□□□□□ -1.09
SHH4YLR164W CRH1P53301 507 aa8.26□□□□□ -1.09
SHH4YLR164W ERP1Q05359 219 aaKnown RBP8.26□□□□□ -1.09
SHH4YLR164W BER1Q06688 274 aaKnown RBP8.26□□□□□ -1.09
SHH4YLR164W RDL1Q12305 139 aaKnown RBP8.26□□□□□ -1.09
SHH4YLR164W YOS1Q3E834 85 aa8.26□□□□□ -1.09
SHH4YLR164W LSB5P25369 354 aa8.25□□□□□ -1.09
SHH4YLR164W YKL162CP36052 402 aa8.25□□□□□ -1.09
SHH4YLR164W ADH5P38113 351 aaKnown RBP8.25□□□□□ -1.09
SHH4YLR164W GPI18P38211 433 aa8.25□□□□□ -1.09
SHH4YLR164W SNX4P47057 423 aa8.25□□□□□ -1.09
SHH4YLR164W PKP2P53170 491 aa8.25□□□□□ -1.09
SHH4YLR164W DID2P69771 204 aa8.25□□□□□ -1.09
SHH4YLR164W ECM18Q04623 453 aa8.25□□□□□ -1.09
SHH4YLR164W HOF1Q05080 669 aa8.25□□□□□ -1.09
SHH4YLR164W AEP3Q12089 606 aa8.25□□□□□ -1.09
SHH4YLR164W ATP14Q12349 124 aa8.25□□□□□ -1.09
SHH4YLR164W APA2P22108 325 aa8.24□□□□□ -1.09
SHH4YLR164W RPD3P32561 433 aa8.24□□□□□ -1.09
SHH4YLR164W IES6P32617 166 aa8.24□□□□□ -1.09
SHH4YLR164W GCV3P39726 170 aaPredicted RBP8.24□□□□□ -1.09
SHH4YLR164W GZF3P42944 551 aaKnown RBP8.24□□□□□ -1.09
SHH4YLR164W ARP3P47117 449 aaKnown RBP8.24□□□□□ -1.09
SHH4YLR164W SUT1P53032 299 aaKnown RBP8.24□□□□□ -1.09
SHH4YLR164W CSI2Q08054 341 aa8.24□□□□□ -1.09
SHH4YLR164W ATG31Q12421 196 aa8.24□□□□□ -1.09
SHH4YLR164W ISN1Q99312 450 aa8.24□□□□□ -1.09
SHH4YLR164W ASP1P38986 381 aaPredicted RBP8.23□□□□□ -1.09
SHH4YLR164W SWM2P40342 146 aa8.23□□□□□ -1.09
SHH4YLR164W YJL118WP47022 219 aa8.23□□□□□ -1.09
SHH4YLR164W YNL234WP53857 426 aa8.23□□□□□ -1.09
SHH4YLR164W LPP1Q04396 274 aa8.23□□□□□ -1.09
SHH4YLR164W YOL029CQ08187 201 aa8.23□□□□□ -1.09
SHH4YLR164W AIM45Q12480 344 aaKnown RBP8.23□□□□□ -1.09
SHH4YLR164W YMR31P19955 123 aa8.22□□□□□ -1.09
SHH4YLR164W YCR025CP25352 136 aa8.22□□□□□ -1.09
SHH4YLR164W SPS18P32572 300 aa8.22□□□□□ -1.09
SHH4YLR164W ISC10P32645 267 aa8.22□□□□□ -1.09
SHH4YLR164W VMA11P32842 164 aa8.22□□□□□ -1.09
SHH4YLR164W SOR1P35497 357 aaKnown RBP8.22□□□□□ -1.09
SHH4YLR164W RPL13BP40212 199 aaKnown RBP8.22□□□□□ -1.09
SHH4YLR164W YMR082CQ04276 118 aa8.22□□□□□ -1.09
SHH4YLR164W PRP11Q07350 266 aaPredicted RBP8.22□□□□□ -1.09
SHH4YLR164W SOR2Q07786 357 aa8.22□□□□□ -1.09
SHH4YLR164W PAM18Q07914 168 aa8.22□□□□□ -1.09
SHH4YLR164W IRC25Q07951 179 aa8.22□□□□□ -1.09
SHH4YLR164W HRD1Q08109 551 aa8.22□□□□□ -1.09
SHH4YLR164W USV1Q12132 391 aa8.22□□□□□ -1.09
SHH4YLR164W RPL13AQ12690 199 aaPredicted RBP8.22□□□□□ -1.09
SHH4YLR164W RPL9AP05738 191 aaKnown RBP8.21□□□□□ -1.1
SHH4YLR164W ERV1P27882 189 aa8.21□□□□□ -1.1
SHH4YLR164W LSM12P38828 187 aaKnown RBP8.21□□□□□ -1.1
SHH4YLR164W TIF11P38912 153 aaKnown RBP8.21□□□□□ -1.1
SHH4YLR164W DFG10P40526 253 aa8.21□□□□□ -1.1
SHH4YLR164W YGL114WP53134 725 aa8.21□□□□□ -1.1
SHH4YLR164W HED1Q03937 162 aa8.21□□□□□ -1.1
SHH4YLR164W FSH2Q05015 223 aa8.21□□□□□ -1.1
SHH4YLR164W YPD1Q07688 167 aa8.21□□□□□ -1.1
SHH4YLR164W ATO3Q12359 275 aa8.21□□□□□ -1.1
SHH4YLR164W YBR085C-AO43137 85 aa8.2□□□□□ -1.1
SHH4YLR164W BUL1P48524 976 aa8.2□□□□□ -1.1
SHH4YLR164W YGR050CP53231 118 aa8.2□□□□□ -1.1
SHH4YLR164W YPL264CQ08980 353 aa8.2□□□□□ -1.1
SHH4YLR164W GEP5Q12393 293 aa8.2□□□□□ -1.1
SHH4YLR164W VPS63O13549 108 aa8.19□□□□□ -1.1
SHH4YLR164W SLM6P38343 150 aa8.19□□□□□ -1.1
SHH4YLR164W YHR138CP38841 114 aaPredicted RBP8.19□□□□□ -1.1
SHH4YLR164W MIX17Q03667 156 aa8.19□□□□□ -1.1
SHH4YLR164W YMR090WQ04304 227 aaKnown RBP8.19□□□□□ -1.1
SHH4YLR164W TMA10Q06177 86 aa8.19□□□□□ -1.1
SHH4YLR164W FCY1Q12178 158 aa8.19□□□□□ -1.1
SHH4YLR164W UBI4P0CG63 381 aaKnown RBP8.18□□□□□ -1.1
SHH4YLR164W URA5P13298 226 aaKnown RBP8.18□□□□□ -1.1
SHH4YLR164W CBT1P36038 271 aaPredicted RBP8.18□□□□□ -1.1
SHH4YLR164W PMU1P36069 295 aa8.18□□□□□ -1.1
SHH4YLR164W YHL044WP38727 235 aa8.18□□□□□ -1.1
SHH4YLR164W PHO23P50947 330 aa8.18□□□□□ -1.1
SHH4YLR164W RPL9BP51401 191 aaKnown RBP8.18□□□□□ -1.1
SHH4YLR164W UBC12P52491 188 aa8.18□□□□□ -1.1
SHH4YLR164W HCH1P53834 153 aa8.18□□□□□ -1.1
SHH4YLR164W TIM44Q01852 431 aa8.18□□□□□ -1.1
SHH4YLR164W TDA6Q06466 467 aa8.18□□□□□ -1.1
SHH4YLR164W FCF2Q12035 217 aaPredicted RBP8.18□□□□□ -1.1
SHH4YLR164W YPR071WQ12346 211 aa8.18□□□□□ -1.1
SHH4YLR164W YEA4P40004 342 aa8.17□□□□□ -1.1
SHH4YLR164W LSM4P40070 187 aaKnown RBP8.17□□□□□ -1.1
SHH4YLR164W STD1Q02794 444 aa8.17□□□□□ -1.1
SHH4YLR164W PRR2Q12310 699 aa8.17□□□□□ -1.1
SHH4YLR164W SPO24Q3E752 67 aa8.17□□□□□ -1.1
SHH4YLR164W YKR045CP36138 183 aa8.16□□□□□ -1.1
SHH4YLR164W ATP3P38077 311 aaKnown RBP8.16□□□□□ -1.1
SHH4YLR164W YGR045CP53229 120 aa8.16□□□□□ -1.1
SHH4YLR164W DYN2Q02647 92 aa8.16□□□□□ -1.1
SHH4YLR164W ADH6Q04894 360 aaKnown RBP8.16□□□□□ -1.1
SHH4YLR164W ARR2Q06597 130 aa8.16□□□□□ -1.1
SHH4YLR164W POC4Q12245 148 aaPredicted RBP8.16□□□□□ -1.1
SHH4YLR164W ELO2P25358 347 aa8.15□□□□□ -1.1
SHH4YLR164W SIP1P32578 815 aa8.15□□□□□ -1.1
SHH4YLR164W YGR151CP53287 111 aa8.15□□□□□ -1.1
SHH4YLR164W YMR317WQ04893 1140 aa8.15□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 1020.4 ms