RNA–Protein interactions for RNA: YLR014C

PPR1, Transcript of Zinc finger transcription factor, yeast

Gene PPR1, Length 2,715 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PPR1	YLR014C	ARO7	P32178	256 aa		4.83	□□□□□ -1.64
PPR1	YLR014C	ECM33	P38248	429 aa	Known RBP	4.83	□□□□□ -1.64
PPR1	YLR014C	RPS20	P38701	121 aa	Known RBP	4.83	□□□□□ -1.64
PPR1	YLR014C	YJL218W	P40892	196 aa	Known RBP	4.83	□□□□□ -1.64
PPR1	YLR014C	LSM8	P47093	109 aa	Known RBP	4.83	□□□□□ -1.64
PPR1	YLR014C	YAE1	P47118	141 aa	Predicted RBP	4.83	□□□□□ -1.64
PPR1	YLR014C	PGA1	P53896	198 aa		4.83	□□□□□ -1.64
PPR1	YLR014C	ATG39	Q06159	398 aa		4.83	□□□□□ -1.64
PPR1	YLR014C	YOL024W	Q08172	172 aa		4.83	□□□□□ -1.64
PPR1	YLR014C	RKI1	Q12189	258 aa		4.83	□□□□□ -1.64
PPR1	YLR014C	ACC1	Q00955	2233 aa	Known RBP	4.83	□□□□□ -1.64
PPR1	YLR014C	GLT1	Q12680	2145 aa	Known RBP	4.83	□□□□□ -1.64
PPR1	YLR014C	CDC7	P06243	507 aa		4.82	□□□□□ -1.64
PPR1	YLR014C	CLB2	P24869	491 aa		4.82	□□□□□ -1.64
PPR1	YLR014C	SNC1	P31109	117 aa		4.82	□□□□□ -1.64
PPR1	YLR014C	HSP150	P32478	413 aa		4.82	□□□□□ -1.64
PPR1	YLR014C	PDC2	P32896	925 aa		4.82	□□□□□ -1.64
PPR1	YLR014C	GPX2	P38143	162 aa		4.82	□□□□□ -1.64
PPR1	YLR014C	YFR054C	P43622	192 aa		4.82	□□□□□ -1.64
PPR1	YLR014C	OST3	P48439	350 aa		4.82	□□□□□ -1.64
PPR1	YLR014C	UBP8	P50102	471 aa		4.82	□□□□□ -1.64
PPR1	YLR014C	YNR062C	P53748	327 aa		4.82	□□□□□ -1.64
PPR1	YLR014C	PDR17	P53844	350 aa		4.82	□□□□□ -1.64
PPR1	YLR014C	YDR387C	Q04162	555 aa		4.82	□□□□□ -1.64
PPR1	YLR014C	YDL177C	Q12257	170 aa		4.82	□□□□□ -1.64
PPR1	YLR014C	RPL31A	P0C2H8	113 aa	Known RBP	4.82	□□□□□ -1.64
PPR1	YLR014C	MRPL28	P36527	147 aa		4.82	□□□□□ -1.64
PPR1	YLR014C	SHE1	P38200	338 aa		4.82	□□□□□ -1.64
PPR1	YLR014C	YBR220C	P38318	560 aa		4.82	□□□□□ -1.64
PPR1	YLR014C	YHR035W	P38769	630 aa		4.82	□□□□□ -1.64
PPR1	YLR014C	COS10	P52924	374 aa		4.82	□□□□□ -1.64
PPR1	YLR014C	YTH1	Q06102	208 aa	Predicted RBP	4.82	□□□□□ -1.64
PPR1	YLR014C	MCP1	Q12106	302 aa		4.82	□□□□□ -1.64
PPR1	YLR014C	PCL9	Q12477	304 aa		4.82	□□□□□ -1.64
PPR1	YLR014C	RAS1	P01119	309 aa		4.81	□□□□□ -1.64
PPR1	YLR014C	PHO2	P07269	559 aa		4.81	□□□□□ -1.64
PPR1	YLR014C	LST7	P53237	242 aa		4.81	□□□□□ -1.64
PPR1	YLR014C	YDR391C	Q04170	232 aa		4.81	□□□□□ -1.64
PPR1	YLR014C	YDL242W	Q07746	117 aa		4.81	□□□□□ -1.64
PPR1	YLR014C	MCH4	Q08268	501 aa		4.81	□□□□□ -1.64
PPR1	YLR014C	ERV2	Q12284	196 aa		4.81	□□□□□ -1.64
PPR1	YLR014C	RPL40A	P0CH08	128 aa	Known RBP	4.81	□□□□□ -1.64
PPR1	YLR014C	RPL40B	P0CH09	128 aa	Known RBP	4.81	□□□□□ -1.64
PPR1	YLR014C	PBI2	P0CT04	75 aa	Known RBP	4.81	□□□□□ -1.64
PPR1	YLR014C	STE4	P18851	423 aa		4.81	□□□□□ -1.64
PPR1	YLR014C	FUN19	P28003	413 aa	Predicted RBP	4.81	□□□□□ -1.64
PPR1	YLR014C	TRS65	P32893	560 aa		4.81	□□□□□ -1.64
PPR1	YLR014C	HAC1	P41546	238 aa		4.81	□□□□□ -1.64
PPR1	YLR014C	PFS2	P42841	465 aa	Known RBP	4.81	□□□□□ -1.64
PPR1	YLR014C	MRX11	Q03079	207 aa		4.81	□□□□□ -1.64
PPR1	YLR014C	UTP15	Q04305	513 aa	Known RBP	4.81	□□□□□ -1.64
PPR1	YLR014C	YPR098C	Q06089	161 aa		4.81	□□□□□ -1.64
PPR1	YLR014C	ATP14	Q12349	124 aa		4.81	□□□□□ -1.64
PPR1	YLR014C	MRPL3	P36516	390 aa		4.81	□□□□□ -1.64
PPR1	YLR014C	SDS24	P38314	527 aa		4.81	□□□□□ -1.64
PPR1	YLR014C	LSM4	P40070	187 aa	Known RBP	4.81	□□□□□ -1.64
PPR1	YLR014C	MST27	P53176	234 aa		4.81	□□□□□ -1.64
PPR1	YLR014C	COQ10	Q08058	207 aa		4.81	□□□□□ -1.64
PPR1	YLR014C	CDC50	P25656	391 aa		4.8	□□□□□ -1.64
PPR1	YLR014C	RPL16B	P26785	198 aa	Known RBP	4.8	□□□□□ -1.64
PPR1	YLR014C	SFK1	P35735	353 aa		4.8	□□□□□ -1.64
PPR1	YLR014C	CUP9	P41817	306 aa		4.8	□□□□□ -1.64
PPR1	YLR014C	SUR7	P54003	302 aa		4.8	□□□□□ -1.64
PPR1	YLR014C	TAZ1	Q06510	381 aa		4.8	□□□□□ -1.64
PPR1	YLR014C	GRX2	P17695	143 aa	Known RBP	4.8	□□□□□ -1.64
PPR1	YLR014C	MTR2	P34232	184 aa	Known RBP	4.8	□□□□□ -1.64
PPR1	YLR014C	GPX1	P36014	167 aa		4.8	□□□□□ -1.64
PPR1	YLR014C	RPE1	P46969	238 aa		4.8	□□□□□ -1.64
PPR1	YLR014C	IKS1	P47042	667 aa		4.8	□□□□□ -1.64
PPR1	YLR014C	CUZ1	P53899	274 aa		4.8	□□□□□ -1.64
PPR1	YLR014C	YMR317W	Q04893	1140 aa		4.8	□□□□□ -1.64
PPR1	YLR014C	YOR376W	Q08900	122 aa		4.8	□□□□□ -1.64
PPR1	YLR014C	SME1	Q12330	94 aa	Predicted RBP	4.8	□□□□□ -1.64
PPR1	YLR014C	TPI1	P00942	248 aa	Known RBP	4.79	□□□□□ -1.64
PPR1	YLR014C	SEC59	P20048	519 aa		4.79	□□□□□ -1.64
PPR1	YLR014C	NUP1	P20676	1076 aa		4.79	□□□□□ -1.64
PPR1	YLR014C	ZRT3	P34240	503 aa		4.79	□□□□□ -1.64
PPR1	YLR014C	PAN3	P36102	679 aa	Predicted RBP	4.79	□□□□□ -1.64
PPR1	YLR014C	TY1A-DR2	Q03964	440 aa	Known RBP	4.79	□□□□□ -1.64
PPR1	YLR014C	YLR346C	Q06139	101 aa		4.79	□□□□□ -1.64
PPR1	YLR014C	IZH3	Q07959	543 aa		4.79	□□□□□ -1.64
PPR1	YLR014C	YOR343C	Q12484	108 aa		4.79	□□□□□ -1.64
PPR1	YLR014C	RPN13	O13563	156 aa		4.79	□□□□□ -1.64
PPR1	YLR014C	KTI12	P34253	313 aa	Known RBP	4.79	□□□□□ -1.64
PPR1	YLR014C	ARC40	P38328	384 aa	Known RBP	4.79	□□□□□ -1.64
PPR1	YLR014C	COS8	P38723	381 aa		4.79	□□□□□ -1.64
PPR1	YLR014C	YHR180W	P38868	163 aa		4.79	□□□□□ -1.64
PPR1	YLR014C	TPN1	P53099	579 aa		4.79	□□□□□ -1.64
PPR1	YLR014C	AIM36	Q03798	255 aa		4.79	□□□□□ -1.64
PPR1	YLR014C	PEX30	Q06169	523 aa		4.79	□□□□□ -1.64
PPR1	YLR014C	HRT1	Q08273	121 aa		4.79	□□□□□ -1.64
PPR1	YLR014C	RRG7	Q08774	242 aa	Predicted RBP	4.79	□□□□□ -1.64
PPR1	YLR014C	YPL257W	Q08974	193 aa		4.79	□□□□□ -1.64
PPR1	YLR014C	FSF1	Q12029	327 aa	Known RBP	4.79	□□□□□ -1.64
PPR1	YLR014C	YEL009C-A	A0A023PZF2	135 aa		4.78	□□□□□ -1.64
PPR1	YLR014C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.78	□□□□□ -1.64	not detected
PPR1	YLR014C	YPC1	P38298	316 aa		4.78	□□□□□ -1.64
PPR1	YLR014C	YPT31	P38555	223 aa	Known RBP	4.78	□□□□□ -1.64
PPR1	YLR014C	YHK8	P38776	514 aa		4.78	□□□□□ -1.64
PPR1	YLR014C	ECM14	P38836	430 aa		4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms