RNA–Protein interactions for RNA: YKR077W

MSA2, Transcript of Putative transcriptional activator, yeastyeast

Gene MSA2, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSA2YKR077W ATG40Q99325 256 aa2.26□□□□□ -2.05
MSA2YKR077W RPB3P16370 318 aaKnown RBP2.25□□□□□ -2.05
MSA2YKR077W MER1P16523 270 aa2.25□□□□□ -2.05
MSA2YKR077W MAG1P22134 296 aaKnown RBP2.25□□□□□ -2.05
MSA2YKR077W TAF14P35189 244 aa2.25□□□□□ -2.05
MSA2YKR077W IKI1P38874 309 aa2.25□□□□□ -2.05
MSA2YKR077W ERJ5P43613 295 aaPredicted RBP2.25□□□□□ -2.05
MSA2YKR077W COG5P53951 403 aa2.25□□□□□ -2.05
MSA2YKR077W QCR8P08525 94 aa2.24□□□□□ -2.05
MSA2YKR077W SHE2P36068 246 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05not detected
MSA2YKR077W YCR087C-AP37263 153 aa2.24□□□□□ -2.05
MSA2YKR077W POP3P53833 195 aaPredicted RBP2.24□□□□□ -2.05
MSA2YKR077W YDR274CP87283 123 aa2.24□□□□□ -2.05
MSA2YKR077W RIO1Q12196 484 aaKnown RBP2.24□□□□□ -2.05
MSA2YKR077W MDM32Q12171 622 aa2.23□□□□□ -2.05
MSA2YKR077W YIL177CP40434 1758 aa2.23□□□□□ -2.05
MSA2YKR077W YJL225CP40889 1758 aa2.23□□□□□ -2.05
MSA2YKR077W CPA1P07258 411 aaKnown RBP2.22□□□□□ -2.05
MSA2YKR077W KNH1P50112 268 aa2.22□□□□□ -2.05
MSA2YKR077W YNG1Q08465 219 aa2.22□□□□□ -2.05
MSA2YKR077W YLR236CA0A023PZG4 107 aa2.21□□□□□ -2.06
MSA2YKR077W RPB4P20433 221 aaPredicted RBP2.21□□□□□ -2.06
MSA2YKR077W ATP15P21306 62 aa2.21□□□□□ -2.06
MSA2YKR077W RFA3P26755 122 aaKnown RBP2.21□□□□□ -2.06
MSA2YKR077W NTG1P31378 399 aa2.21□□□□□ -2.06
MSA2YKR077W HMF1P40037 129 aaKnown RBP2.21□□□□□ -2.06
MSA2YKR077W CUS2P53830 285 aaPredicted RBP2.21□□□□□ -2.06
MSA2YKR077W UBR2Q07963 1872 aa2.21□□□□□ -2.06
MSA2YKR077W SIR2P06700 562 aa2.2□□□□□ -2.06
MSA2YKR077W CKS1P20486 150 aaKnown RBP2.2□□□□□ -2.06
MSA2YKR077W YOL160WQ08321 113 aa2.2□□□□□ -2.06
MSA2YKR077W TVP38P36164 337 aa2.19□□□□□ -2.06
MSA2YKR077W YDL180WQ12301 547 aa2.19□□□□□ -2.06
MSA2YKR077W HTB1P02293 131 aaKnown RBP2.18□□□□□ -2.06
MSA2YKR077W HTB2P02294 131 aa2.18□□□□□ -2.06
MSA2YKR077W IKI3Q06706 1349 aaKnown RBP2.17□□□□□ -2.06
MSA2YKR077W CDC36P06100 191 aaPredicted RBP2.17□□□□□ -2.06
MSA2YKR077W RPL27AP0C2H6 136 aaKnown RBP2.17□□□□□ -2.06
MSA2YKR077W AIM25P47140 327 aa2.17□□□□□ -2.06
MSA2YKR077W MPA43P53583 542 aaPredicted RBP2.17□□□□□ -2.06
MSA2YKR077W CUE4Q04201 117 aaPredicted RBP2.17□□□□□ -2.06
MSA2YKR077W YRA1Q12159 226 aaKnown RBP2.17□□□□□ -2.06
MSA2YKR077W HNT1Q04344 158 aaKnown RBP2.16□□□□□ -2.06
MSA2YKR077W KDX1P36005 433 aa2.15□□□□□ -2.07
MSA2YKR077W YER076CP40049 302 aa2.15□□□□□ -2.07
MSA2YKR077W YMR226CQ05016 267 aaKnown RBP2.15□□□□□ -2.07
MSA2YKR077W GGA1Q06336 557 aa2.15□□□□□ -2.07
MSA2YKR077W RAD28Q12021 506 aa2.15□□□□□ -2.07
MSA2YKR077W CYR1P08678 2026 aaKnown RBP2.15□□□□□ -2.07
MSA2YKR077W SEC11P15367 167 aa2.14□□□□□ -2.07
MSA2YKR077W YKT6P36015 200 aaKnown RBP2.14□□□□□ -2.07
MSA2YKR077W ERG10P41338 398 aaKnown RBP2.14□□□□□ -2.07
MSA2YKR077W OPY1P38271 328 aa2.13□□□□□ -2.07
MSA2YKR077W VMA22P38784 181 aa2.13□□□□□ -2.07
MSA2YKR077W RFC4P40339 323 aaKnown RBP2.13□□□□□ -2.07
MSA2YKR077W ODC2Q99297 307 aa2.13□□□□□ -2.07
MSA2YKR077W MSB2P32334 1306 aa2.13□□□□□ -2.07
MSA2YKR077W CBF1P17106 351 aa2.12□□□□□ -2.07
MSA2YKR077W OCH1P31755 480 aa2.12□□□□□ -2.07
MSA2YKR077W UBC7Q02159 165 aa2.12□□□□□ -2.07
MSA2YKR077W YER034WP40022 185 aaKnown RBP2.11□□□□□ -2.07
MSA2YKR077W MPC3P53311 146 aa2.11□□□□□ -2.07
MSA2YKR077W YNL146C-AQ3E7Z1 64 aa2.11□□□□□ -2.07
MSA2YKR077W MATALPHA2P0CY08 210 aa2.1□□□□□ -2.07
MSA2YKR077W HMLALPHA2P0CY09 210 aa2.1□□□□□ -2.07
MSA2YKR077W SPO13P23624 291 aa2.1□□□□□ -2.07
MSA2YKR077W CNB1P25296 175 aa2.1□□□□□ -2.07
MSA2YKR077W YCR090CP25654 182 aaKnown RBP2.1□□□□□ -2.07
MSA2YKR077W RIO2P40160 425 aaKnown RBP2.1□□□□□ -2.07
MSA2YKR077W MRPS17Q03246 237 aaPredicted RBP2.1□□□□□ -2.07
MSA2YKR077W YCL012CQ8J0M4 134 aa2.1□□□□□ -2.07
MSA2YKR077W POR1P04840 283 aaKnown RBP2.09□□□□□ -2.07
MSA2YKR077W PAN3P36102 679 aaPredicted RBP2.09□□□□□ -2.07
MSA2YKR077W MMS2P53152 137 aa2.09□□□□□ -2.07
MSA2YKR077W GET1P53192 235 aa2.09□□□□□ -2.07
MSA2YKR077W FUS2Q05670 677 aa2.09□□□□□ -2.07
MSA2YKR077W MBF1O14467 151 aaKnown RBP2.08□□□□□ -2.08
MSA2YKR077W ASF2P32448 525 aaPredicted RBP2.08□□□□□ -2.08
MSA2YKR077W TVP23P38962 199 aa2.08□□□□□ -2.08
MSA2YKR077W CWC21Q03375 135 aaKnown RBP2.08□□□□□ -2.08
MSA2YKR077W YHR007C-AQ07074 71 aa2.08□□□□□ -2.08
MSA2YKR077W ABP140Q08641 628 aaKnown RBP2.08□□□□□ -2.08
MSA2YKR077W DGA1Q08650 418 aa2.08□□□□□ -2.08
MSA2YKR077W MRS1P07266 363 aa2.07□□□□□ -2.08
MSA2YKR077W AIM2P39721 246 aa2.07□□□□□ -2.08
MSA2YKR077W SKI6P46948 246 aaPredicted RBP2.07□□□□□ -2.08
MSA2YKR077W GET4Q12125 312 aa2.07□□□□□ -2.08
MSA2YKR077W ADF1Q2V2Q1 113 aa2.07□□□□□ -2.08
MSA2YKR077W YEA4P40004 342 aa2.06□□□□□ -2.08
MSA2YKR077W CGR1P53188 120 aa2.06□□□□□ -2.08
MSA2YKR077W VAR1P02381 398 aa2.05□□□□□ -2.08
MSA2YKR077W YPL073CP40323 161 aa2.05□□□□□ -2.08
MSA2YKR077W NOP19P53317 196 aaPredicted RBP2.05□□□□□ -2.08
MSA2YKR077W RCE1Q03530 315 aa2.05□□□□□ -2.08
MSA2YKR077W DYN3Q04949 312 aa2.05□□□□□ -2.08
MSA2YKR077W YPR174CQ06616 221 aaPredicted RBP2.05□□□□□ -2.08
MSA2YKR077W QCR7P00128 127 aa2.04□□□□□ -2.08
MSA2YKR077W ECM4P36156 370 aa2.04□□□□□ -2.08
MSA2YKR077W FLX1P40464 311 aa2.04□□□□□ -2.08
MSA2YKR077W SER2P42941 309 aa2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 54.8 ms