RNA–Protein interactions for RNA: YKL006C-A

SFT1, Transcript of Intra-Golgi v-SNARE, yeastyeast

Gene SFT1, Length 294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFT1YKL006C-A KDX1P36005 433 aa2.03□□□□□ -2.08
SFT1YKL006C-A YGP1P38616 354 aaKnown RBP2.03□□□□□ -2.08
SFT1YKL006C-A SKI6P46948 246 aaPredicted RBP2.03□□□□□ -2.08
SFT1YKL006C-A OST2P46964 130 aa2.03□□□□□ -2.08
SFT1YKL006C-A GON7P46984 123 aa2.03□□□□□ -2.08
SFT1YKL006C-A SBH2P52871 88 aa2.03□□□□□ -2.08
SFT1YKL006C-A HNT1Q04344 158 aaKnown RBP2.03□□□□□ -2.08
SFT1YKL006C-A ATG39Q06159 398 aa2.03□□□□□ -2.08
SFT1YKL006C-A SHH4Q06236 168 aa2.03□□□□□ -2.08
SFT1YKL006C-A ARR2Q06597 130 aa2.03□□□□□ -2.08
SFT1YKL006C-A YOR268CQ08734 132 aa2.03□□□□□ -2.08
SFT1YKL006C-A RIO1Q12196 484 aaKnown RBP2.03□□□□□ -2.08
SFT1YKL006C-A PSF1Q12488 208 aa2.03□□□□□ -2.08
SFT1YKL006C-A Q0255P03881 472 aa2.02□□□□□ -2.09
SFT1YKL006C-A HIS3P06633 220 aa2.02□□□□□ -2.09
SFT1YKL006C-A ADH3P07246 375 aaKnown RBP2.02□□□□□ -2.09
SFT1YKL006C-A RPS28BP0C0X0 67 aaKnown RBP2.02□□□□□ -2.09
SFT1YKL006C-A RPB3P16370 318 aaKnown RBP2.02□□□□□ -2.09
SFT1YKL006C-A SEC14P24280 304 aaKnown RBP2.02□□□□□ -2.09
SFT1YKL006C-A MDH3P32419 343 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09not detected
SFT1YKL006C-A YKL102CP34249 101 aa2.02□□□□□ -2.09
SFT1YKL006C-A SRP102P36057 244 aaPredicted RBP2.02□□□□□ -2.09
SFT1YKL006C-A SLM6P38343 150 aa2.02□□□□□ -2.09
SFT1YKL006C-A CTR2P38865 189 aa2.02□□□□□ -2.09
SFT1YKL006C-A ARC15P40518 154 aaRIP-Chip data2.02□□□□□ -2.09not detected
SFT1YKL006C-A SMD3P43321 101 aaKnown RBP2.02□□□□□ -2.09
SFT1YKL006C-A YJR111CP47148 283 aaKnown RBP2.02□□□□□ -2.09
SFT1YKL006C-A NQM1P53228 333 aaPredicted RBP2.02□□□□□ -2.09
SFT1YKL006C-A GPI17Q04080 534 aa2.02□□□□□ -2.09
SFT1YKL006C-A YPR063CQ12160 140 aa2.02□□□□□ -2.09
SFT1YKL006C-A RPS28AQ3E7X9 67 aaPredicted RBP2.02□□□□□ -2.09
SFT1YKL006C-A FKS1P38631 1876 aaKnown RBP2.01□□□□□ -2.09
SFT1YKL006C-A CDC8P00572 216 aa2.01□□□□□ -2.09
SFT1YKL006C-A RPL9AP05738 191 aaKnown RBP2.01□□□□□ -2.09
SFT1YKL006C-A UBC8P28263 218 aa2.01□□□□□ -2.09
SFT1YKL006C-A UTR5P32630 166 aa2.01□□□□□ -2.09
SFT1YKL006C-A MED6P38782 295 aa2.01□□□□□ -2.09
SFT1YKL006C-A YER188WP40103 239 aa2.01□□□□□ -2.09
SFT1YKL006C-A PRM10P42946 383 aa2.01□□□□□ -2.09
SFT1YKL006C-A RPL9BP51401 191 aaKnown RBP2.01□□□□□ -2.09
SFT1YKL006C-A PGA1P53896 198 aa2.01□□□□□ -2.09
SFT1YKL006C-A SUE1Q06524 206 aa2.01□□□□□ -2.09
SFT1YKL006C-A DGA1Q08650 418 aa2.01□□□□□ -2.09
SFT1YKL006C-A MHT1Q12525 324 aa2.01□□□□□ -2.09
SFT1YKL006C-A YHR032W-AP0C5N6 59 aa2□□□□□ -2.09
SFT1YKL006C-A URA5P13298 226 aaKnown RBP2□□□□□ -2.09
SFT1YKL006C-A MRPS28P21771 286 aa2□□□□□ -2.09
SFT1YKL006C-A BET1P22804 142 aa2□□□□□ -2.09
SFT1YKL006C-A OCH1P31755 480 aa2□□□□□ -2.09
SFT1YKL006C-A TVP38P36164 337 aa2□□□□□ -2.09
SFT1YKL006C-A SKG1P36169 355 aa2□□□□□ -2.09
SFT1YKL006C-A SOL1P50278 321 aa2□□□□□ -2.09
SFT1YKL006C-A CAB4P53332 305 aa2□□□□□ -2.09
SFT1YKL006C-A COS6P53344 381 aa2□□□□□ -2.09
SFT1YKL006C-A MPA43P53583 542 aaPredicted RBP2□□□□□ -2.09
SFT1YKL006C-A MAK3Q03503 176 aa2□□□□□ -2.09
SFT1YKL006C-A MPD1Q12404 318 aaKnown RBP2□□□□□ -2.09
SFT1YKL006C-A EFG1Q3E705 233 aaKnown RBP2□□□□□ -2.09
SFT1YKL006C-A SAS5Q99314 248 aa2□□□□□ -2.09
SFT1YKL006C-A PDR18P53756 1333 aa1.99□□□□□ -2.09
SFT1YKL006C-A PET54P10834 293 aa1.99□□□□□ -2.09
SFT1YKL006C-A ATP15P21306 62 aa1.99□□□□□ -2.09
SFT1YKL006C-A OPY1P38271 328 aa1.99□□□□□ -2.09
SFT1YKL006C-A TIF34P40217 347 aaKnown RBP1.99□□□□□ -2.09
SFT1YKL006C-A SOK1P40317 901 aa1.99□□□□□ -2.09
SFT1YKL006C-A PIR5P46999 287 aa1.99□□□□□ -2.09
SFT1YKL006C-A MOG1P47123 218 aa1.99□□□□□ -2.09
SFT1YKL006C-A SPG3Q04398 127 aaPredicted RBP1.99□□□□□ -2.09
SFT1YKL006C-A YLR031WQ07978 186 aa1.99□□□□□ -2.09
SFT1YKL006C-A AKR2Q12013 749 aa1.99□□□□□ -2.09
SFT1YKL006C-A TSC3Q3E790 80 aa1.99□□□□□ -2.09
SFT1YKL006C-A YPR014CQ6B0W2 109 aa1.99□□□□□ -2.09
SFT1YKL006C-A CKS1P20486 150 aaKnown RBP1.98□□□□□ -2.09
SFT1YKL006C-A BUB2P26448 306 aaPredicted RBP1.98□□□□□ -2.09
SFT1YKL006C-A YKR032WP36127 104 aa1.98□□□□□ -2.09
SFT1YKL006C-A SER2P42941 309 aa1.98□□□□□ -2.09
SFT1YKL006C-A TDA4P47153 279 aa1.98□□□□□ -2.09
SFT1YKL006C-A PLP1Q04004 230 aa1.98□□□□□ -2.09
SFT1YKL006C-A SPC2Q04969 178 aa1.98□□□□□ -2.09
SFT1YKL006C-A FEX1Q08913 375 aa1.98□□□□□ -2.09
SFT1YKL006C-A FEX2Q08991 375 aa1.98□□□□□ -2.09
SFT1YKL006C-A YOR342CQ12182 319 aa1.98□□□□□ -2.09
SFT1YKL006C-A DGK1Q12382 290 aa1.98□□□□□ -2.09
SFT1YKL006C-A YOR1P53049 1477 aa1.98□□□□□ -2.09
SFT1YKL006C-A TIM9O74700 87 aa1.97□□□□□ -2.09
SFT1YKL006C-A SPO13P23624 291 aa1.97□□□□□ -2.09
SFT1YKL006C-A NUF2P33895 451 aa1.97□□□□□ -2.09
SFT1YKL006C-A MRPL17P36528 281 aa1.97□□□□□ -2.09
SFT1YKL006C-A CSH1P38287 376 aa1.97□□□□□ -2.09
SFT1YKL006C-A POP7P38291 140 aa1.97□□□□□ -2.09
SFT1YKL006C-A YER084WP40057 128 aa1.97□□□□□ -2.09
SFT1YKL006C-A BUD13P46947 266 aaPredicted RBP1.97□□□□□ -2.09
SFT1YKL006C-A SNX4P47057 423 aa1.97□□□□□ -2.09
SFT1YKL006C-A AIF1P52923 378 aa1.97□□□□□ -2.09
SFT1YKL006C-A YGL088WP53151 121 aa1.97□□□□□ -2.09
SFT1YKL006C-A YGR026WP53217 278 aa1.97□□□□□ -2.09
SFT1YKL006C-A YDR114CQ04597 100 aa1.97□□□□□ -2.09
SFT1YKL006C-A YPR202WQ08993 238 aa1.97□□□□□ -2.09
SFT1YKL006C-A YLR046CQ12253 270 aa1.97□□□□□ -2.09
SFT1YKL006C-A CCA1P21269 546 aa1.96□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms