RNA–Protein interactions for RNA: YJR140C

HIR3, Transcript of Subunit of the HIR complex, yeastyeast

Gene HIR3, Length 4,947 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIR3YJR140C MPA43P53583 542 aaPredicted RBP1.26□□□□□ -2.21
HIR3YJR140C YNL184CP53876 108 aa1.26□□□□□ -2.21
HIR3YJR140C YNL140CP53910 189 aa1.26□□□□□ -2.21
HIR3YJR140C BRX1Q08235 291 aaKnown RBP1.26□□□□□ -2.21
HIR3YJR140C GCY1P14065 312 aaKnown RBP RIP-Chip data1.26□□□□□ -2.21not detected
HIR3YJR140C MSA2P36157 363 aa1.26□□□□□ -2.21
HIR3YJR140C SNX4P47057 423 aa1.26□□□□□ -2.21
HIR3YJR140C SPG3Q04398 127 aaPredicted RBP1.26□□□□□ -2.21
HIR3YJR140C YOR342CQ12182 319 aa1.26□□□□□ -2.21
HIR3YJR140C YCL012CQ8J0M4 134 aa1.26□□□□□ -2.21
HIR3YJR140C ODC2Q99297 307 aa1.26□□□□□ -2.21
HIR3YJR140C REP2P03872 296 aa1.25□□□□□ -2.21
HIR3YJR140C GRX2P17695 143 aaKnown RBP1.25□□□□□ -2.21
HIR3YJR140C YBR209WP38311 105 aa1.25□□□□□ -2.21
HIR3YJR140C YKE4P40544 346 aa1.25□□□□□ -2.21
HIR3YJR140C RSM10Q03201 203 aa1.25□□□□□ -2.21
HIR3YJR140C YOR268CQ08734 132 aa1.25□□□□□ -2.21
HIR3YJR140C MPD1Q12404 318 aaKnown RBP1.25□□□□□ -2.21
HIR3YJR140C PBI2P0CT04 75 aaKnown RBP1.25□□□□□ -2.21
HIR3YJR140C TRX3P25372 127 aa1.25□□□□□ -2.21
HIR3YJR140C TFC1P32367 649 aa1.25□□□□□ -2.21
HIR3YJR140C RPL33BP41056 107 aaKnown RBP1.25□□□□□ -2.21
HIR3YJR140C TIM13P53299 105 aa1.25□□□□□ -2.21
HIR3YJR140C AIM34Q03673 198 aa1.25□□□□□ -2.21
HIR3YJR140C YDR249CQ03787 373 aa1.25□□□□□ -2.21
HIR3YJR140C MRPS8Q03799 155 aa1.25□□□□□ -2.21
HIR3YJR140C NSL1Q12143 216 aa1.25□□□□□ -2.21
HIR3YJR140C RPL35AP0CX84 120 aaKnown RBP1.25□□□□□ -2.21
HIR3YJR140C RPL35BP0CX85 120 aaKnown RBP1.25□□□□□ -2.21
HIR3YJR140C SEC17P32602 292 aa1.25□□□□□ -2.21
HIR3YJR140C UTR5P32630 166 aa1.25□□□□□ -2.21
HIR3YJR140C VTC1P40046 129 aaRIP-Chip data1.25□□□□□ -2.21 RIP-Chip
HIR3YJR140C AIM25P47140 327 aa1.25□□□□□ -2.21
HIR3YJR140C PEX11Q12462 236 aa1.25□□□□□ -2.21
HIR3YJR140C YLR156WP0CE96 114 aa1.25□□□□□ -2.21
HIR3YJR140C YLR159WP0CE97 114 aa1.25□□□□□ -2.21
HIR3YJR140C YLR161WP0CE98 114 aa1.25□□□□□ -2.21
HIR3YJR140C KRE1P17260 313 aa1.25□□□□□ -2.21
HIR3YJR140C PET9P18239 318 aaKnown RBP1.25□□□□□ -2.21
HIR3YJR140C AHC2P25649 128 aa1.25□□□□□ -2.21
HIR3YJR140C NSG1P38837 291 aa1.25□□□□□ -2.21
HIR3YJR140C GVP36P40531 326 aaKnown RBP1.25□□□□□ -2.21
HIR3YJR140C SHH4Q06236 168 aa1.25□□□□□ -2.21
HIR3YJR140C YPD1Q07688 167 aa1.25□□□□□ -2.21
HIR3YJR140C ATG40Q99325 256 aa1.25□□□□□ -2.21
HIR3YJR140C RAS2P01120 322 aaKnown RBP1.24□□□□□ -2.21
HIR3YJR140C RPS23AP0CX29 145 aaKnown RBP1.24□□□□□ -2.21
HIR3YJR140C RPS23BP0CX30 145 aa1.24□□□□□ -2.21
HIR3YJR140C MEI4P29467 408 aa1.24□□□□□ -2.21
HIR3YJR140C GLR1P41921 483 aaKnown RBP1.24□□□□□ -2.21
HIR3YJR140C PGA1P53896 198 aa1.24□□□□□ -2.21
HIR3YJR140C APJ1P53940 528 aa1.24□□□□□ -2.21
HIR3YJR140C GRX8Q05926 109 aa1.24□□□□□ -2.21
HIR3YJR140C TAF2P23255 1407 aa1.24□□□□□ -2.21
HIR3YJR140C NOP1P15646 327 aaKnown RBP1.24□□□□□ -2.21
HIR3YJR140C AGA2P32781 87 aa1.24□□□□□ -2.21
HIR3YJR140C CIS3P47001 227 aa1.24□□□□□ -2.21
HIR3YJR140C SAY1P53324 424 aa1.24□□□□□ -2.21
HIR3YJR140C ERG10P41338 398 aaKnown RBP1.24□□□□□ -2.21
HIR3YJR140C YMR295CQ03559 197 aa1.24□□□□□ -2.21
HIR3YJR140C MSA1Q08471 629 aa1.24□□□□□ -2.21
HIR3YJR140C PEX4P29340 183 aa1.23□□□□□ -2.21
HIR3YJR140C ARO80Q04052 950 aa1.23□□□□□ -2.21
HIR3YJR140C FSF1Q12029 327 aaKnown RBP1.23□□□□□ -2.21
HIR3YJR140C BOL1Q3E793 110 aa1.23□□□□□ -2.21
HIR3YJR140C TIM9O74700 87 aa1.23□□□□□ -2.21
HIR3YJR140C ERV15P38312 142 aa1.23□□□□□ -2.21
HIR3YJR140C NVJ1P38881 321 aa1.23□□□□□ -2.21
HIR3YJR140C ARO8P53090 500 aaKnown RBP1.23□□□□□ -2.21
HIR3YJR140C GAS3Q03655 524 aa1.23□□□□□ -2.21
HIR3YJR140C ARR2Q06597 130 aa1.23□□□□□ -2.21
HIR3YJR140C MCP1Q12106 302 aa1.23□□□□□ -2.21
HIR3YJR140C CTR2P38865 189 aa1.23□□□□□ -2.21
HIR3YJR140C SNO1Q03144 224 aa1.23□□□□□ -2.21
HIR3YJR140C RRP17Q04031 235 aaPredicted RBP1.23□□□□□ -2.21
HIR3YJR140C TRM12Q04235 462 aa1.23□□□□□ -2.21
HIR3YJR140C CLG1P35190 452 aa1.23□□□□□ -2.21
HIR3YJR140C YEA4P40004 342 aa1.23□□□□□ -2.21
HIR3YJR140C SER2P42941 309 aa1.23□□□□□ -2.21
HIR3YJR140C UBC12P52491 188 aa1.23□□□□□ -2.21
HIR3YJR140C MDH2P22133 377 aa1.22□□□□□ -2.21
HIR3YJR140C RPC19P28000 142 aaKnown RBP1.22□□□□□ -2.21
HIR3YJR140C OCH1P31755 480 aa1.22□□□□□ -2.21
HIR3YJR140C PAN3P36102 679 aaPredicted RBP1.22□□□□□ -2.21
HIR3YJR140C MRPL17P36528 281 aa1.22□□□□□ -2.21
HIR3YJR140C FIG1P38224 298 aa1.22□□□□□ -2.21
HIR3YJR140C GPI17Q04080 534 aa1.22□□□□□ -2.21
HIR3YJR140C CUE4Q04201 117 aaPredicted RBP1.22□□□□□ -2.21
HIR3YJR140C ATO3Q12359 275 aa1.22□□□□□ -2.21
HIR3YJR140C MET5P47169 1442 aa1.22□□□□□ -2.21
HIR3YJR140C SRP102P36057 244 aaPredicted RBP1.22□□□□□ -2.21
HIR3YJR140C DOC1P53068 250 aa1.22□□□□□ -2.21
HIR3YJR140C CAB4P53332 305 aa1.22□□□□□ -2.21
HIR3YJR140C VPS71Q03433 280 aa1.22□□□□□ -2.21
HIR3YJR140C YPR127WQ06494 345 aa1.22□□□□□ -2.21
HIR3YJR140C DGA1Q08650 418 aa1.22□□□□□ -2.21
HIR3YJR140C KDX1P36005 433 aa1.22□□□□□ -2.21
HIR3YJR140C YOR062CP36025 268 aa1.22□□□□□ -2.21
HIR3YJR140C SDH4P37298 181 aa1.22□□□□□ -2.21
HIR3YJR140C YNL217WP40152 326 aa1.22□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 42.7 ms