RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W AGE2P40529 298 aa1.42□□□□□ -2.18
SEC28YIL076W SPG4Q04438 115 aa1.42□□□□□ -2.18
SEC28YIL076W YDR278CQ05612 105 aa1.42□□□□□ -2.18
SEC28YIL076W YLR162WQ06235 118 aa1.42□□□□□ -2.18
SEC28YIL076W YPR172WQ06608 200 aa1.42□□□□□ -2.18
SEC28YIL076W RPL2AP0CX45 254 aaKnown RBP1.41□□□□□ -2.18
SEC28YIL076W RPL2BP0CX46 254 aaKnown RBP1.41□□□□□ -2.18
SEC28YIL076W POL30P15873 258 aaKnown RBP1.41□□□□□ -2.18
SEC28YIL076W GRX2P17695 143 aaKnown RBP1.41□□□□□ -2.18
SEC28YIL076W CDC39P25655 2108 aaKnown RBP1.41□□□□□ -2.18
SEC28YIL076W MEI4P29467 408 aa1.41□□□□□ -2.18
SEC28YIL076W YEL073CP39974 107 aa1.41□□□□□ -2.18
SEC28YIL076W RMR1P53060 241 aa1.41□□□□□ -2.18
SEC28YIL076W YNL247WP53852 767 aaKnown RBP1.41□□□□□ -2.18
SEC28YIL076W ERV25P54837 211 aaKnown RBP1.41□□□□□ -2.18
SEC28YIL076W RHO3Q00245 231 aaKnown RBP1.41□□□□□ -2.18
SEC28YIL076W COX20Q04935 205 aa1.41□□□□□ -2.18
SEC28YIL076W YPR098CQ06089 161 aa1.41□□□□□ -2.18
SEC28YIL076W ARR2Q06597 130 aa1.41□□□□□ -2.18
SEC28YIL076W YOL024WQ08172 172 aa1.41□□□□□ -2.18
SEC28YIL076W YOR186WQ08560 144 aa1.41□□□□□ -2.18
SEC28YIL076W EFG1Q3E705 233 aaKnown RBP1.41□□□□□ -2.18
SEC28YIL076W MRP1P10662 321 aaKnown RBP1.4□□□□□ -2.19
SEC28YIL076W PHO13P19881 312 aa1.4□□□□□ -2.19
SEC28YIL076W TAF14P35189 244 aa1.4□□□□□ -2.19
SEC28YIL076W MRPL39P36533 70 aa1.4□□□□□ -2.19
SEC28YIL076W YBR096WP38256 230 aa1.4□□□□□ -2.19
SEC28YIL076W GOS1P38736 223 aa1.4□□□□□ -2.19
SEC28YIL076W CYC2P38909 366 aa1.4□□□□□ -2.19
SEC28YIL076W YNR062CP53748 327 aa1.4□□□□□ -2.19
SEC28YIL076W SML1Q04964 104 aa1.4□□□□□ -2.19
SEC28YIL076W ATG39Q06159 398 aa1.4□□□□□ -2.19
SEC28YIL076W LDB18Q07887 179 aa1.4□□□□□ -2.19
SEC28YIL076W YPL257WQ08974 193 aa1.4□□□□□ -2.19
SEC28YIL076W YOL107WQ12239 342 aa1.4□□□□□ -2.19
SEC28YIL076W SEY1Q99287 776 aa1.4□□□□□ -2.19
SEC28YIL076W SLH1P53327 1967 aaKnown RBP1.39□□□□□ -2.19
SEC28YIL076W MDM35O60200 86 aa1.39□□□□□ -2.19
SEC28YIL076W CPA1P07258 411 aaKnown RBP1.39□□□□□ -2.19
SEC28YIL076W HOM6P31116 359 aaKnown RBP1.39□□□□□ -2.19
SEC28YIL076W YPT52P36018 234 aaKnown RBP1.39□□□□□ -2.19
SEC28YIL076W YIL086CP40503 102 aa1.39□□□□□ -2.19
SEC28YIL076W EMC2P47133 292 aaKnown RBP1.39□□□□□ -2.19
SEC28YIL076W TIM13P53299 105 aa1.39□□□□□ -2.19
SEC28YIL076W HEM25Q07534 307 aa1.39□□□□□ -2.19
SEC28YIL076W DAS2Q12084 232 aa1.39□□□□□ -2.19
SEC28YIL076W FLO9P39712 1322 aa1.39□□□□□ -2.19
SEC28YIL076W BCY1P07278 416 aaKnown RBP1.38□□□□□ -2.19
SEC28YIL076W PRP18P33411 251 aaPredicted RBP1.38□□□□□ -2.19
SEC28YIL076W LDB7P38210 180 aa1.38□□□□□ -2.19
SEC28YIL076W YIL001WP40560 513 aa1.38□□□□□ -2.19
SEC28YIL076W YDR209CQ03480 137 aa1.38□□□□□ -2.19
SEC28YIL076W TRM12Q04235 462 aa1.38□□□□□ -2.19
SEC28YIL076W ADH6Q04894 360 aaKnown RBP1.38□□□□□ -2.19
SEC28YIL076W PET9P18239 318 aaKnown RBP1.37□□□□□ -2.19
SEC28YIL076W MGM101P32787 269 aaKnown RBP1.37□□□□□ -2.19
SEC28YIL076W MRPL15P36523 253 aa1.37□□□□□ -2.19
SEC28YIL076W SVP26P38869 228 aa1.37□□□□□ -2.19
SEC28YIL076W GIM4P40005 111 aaKnown RBP1.37□□□□□ -2.19
SEC28YIL076W RPL13BP40212 199 aaKnown RBP1.37□□□□□ -2.19
SEC28YIL076W RPC17P47076 161 aa1.37□□□□□ -2.19
SEC28YIL076W JHD2P47156 728 aaPredicted RBP1.37□□□□□ -2.19
SEC28YIL076W GTT2Q12390 233 aa1.37□□□□□ -2.19
SEC28YIL076W RPL13AQ12690 199 aaPredicted RBP1.37□□□□□ -2.19
SEC28YIL076W BLM10P43583 2143 aa1.37□□□□□ -2.19
SEC28YIL076W RPL24AP04449 155 aaKnown RBP1.36□□□□□ -2.19
SEC28YIL076W STP22P25604 385 aa1.36□□□□□ -2.19
SEC28YIL076W YCR099CP25657 155 aa1.36□□□□□ -2.19
SEC28YIL076W RPS27AP35997 82 aaKnown RBP1.36□□□□□ -2.19
SEC28YIL076W RPS27BP38711 82 aa1.36□□□□□ -2.19
SEC28YIL076W TCD1P38756 429 aa1.36□□□□□ -2.19
SEC28YIL076W PHB1P40961 287 aa1.36□□□□□ -2.19
SEC28YIL076W YAR1P46683 200 aa1.36□□□□□ -2.19
SEC28YIL076W TRM9P49957 279 aa1.36□□□□□ -2.19
SEC28YIL076W TOS8P53147 276 aa1.36□□□□□ -2.19
SEC28YIL076W YNL046WP53956 172 aa1.36□□□□□ -2.19
SEC28YIL076W YCL042WP25572 119 aa1.35□□□□□ -2.19
SEC28YIL076W SRB4P32569 687 aa1.35□□□□□ -2.19
SEC28YIL076W YHR127WP38833 243 aaKnown RBP1.35□□□□□ -2.19
SEC28YIL076W YAR068WP39564 161 aa1.35□□□□□ -2.19
SEC28YIL076W MEP1P40260 492 aa1.35□□□□□ -2.19
SEC28YIL076W PET117Q02771 107 aa1.35□□□□□ -2.19
SEC28YIL076W YOR342CQ12182 319 aa1.35□□□□□ -2.19
SEC28YIL076W YOR097CQ12274 175 aaPredicted RBP1.35□□□□□ -2.19
SEC28YIL076W HTL1Q9URQ5 78 aa1.35□□□□□ -2.19
SEC28YIL076W BPH1P25356 2167 aa1.34□□□□□ -2.19
SEC28YIL076W QCR6P00127 147 aa1.34□□□□□ -2.19
SEC28YIL076W SPT3P06844 337 aa1.34□□□□□ -2.19
SEC28YIL076W NSP1P14907 823 aaKnown RBP1.34□□□□□ -2.19
SEC28YIL076W CBF1P17106 351 aa1.34□□□□□ -2.19
SEC28YIL076W ADE1P27616 306 aa1.34□□□□□ -2.19
SEC28YIL076W UPS2P35200 230 aa1.34□□□□□ -2.19
SEC28YIL076W MAK5P38112 773 aaPredicted RBP1.34□□□□□ -2.19
SEC28YIL076W RRF1P38771 230 aa1.34□□□□□ -2.19
SEC28YIL076W ICE2P40499 491 aa1.34□□□□□ -2.19
SEC28YIL076W CUP9P41817 306 aa1.34□□□□□ -2.19
SEC28YIL076W RPA43P46669 326 aa1.34□□□□□ -2.19
SEC28YIL076W YJR056CP47115 236 aa1.34□□□□□ -2.19
SEC28YIL076W YJR149WP47177 404 aa1.34□□□□□ -2.19
SEC28YIL076W USE1P53146 245 aa1.34□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms