RNA–Protein interactions for RNA: YDR452W

PPN1, Transcript of Vacuolar endopolyphosphatase with a role in phosphate metabolism, yeastyeast

Gene PPN1, Length 2,025 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PPN1YDR452W CFT1Q06632 1357 aaKnown RBP0.87□□□□□ -2.27
PPN1YDR452W CDC28P00546 298 aaKnown RBP0.87□□□□□ -2.27
PPN1YDR452W TFC1P32367 649 aa0.87□□□□□ -2.27
PPN1YDR452W SEC17P32602 292 aa0.87□□□□□ -2.27
PPN1YDR452W TCA17P32613 152 aa0.87□□□□□ -2.27
PPN1YDR452W PRE6P40303 254 aaKnown RBP0.87□□□□□ -2.27
PPN1YDR452W MIC26P50087 233 aa0.87□□□□□ -2.27
PPN1YDR452W CUS2P53830 285 aaPredicted RBP0.87□□□□□ -2.27
PPN1YDR452W CDC123Q05791 360 aa0.87□□□□□ -2.27
PPN1YDR452W MCP1Q12106 302 aa0.87□□□□□ -2.27
PPN1YDR452W TDA8Q6B2U8 126 aa0.87□□□□□ -2.27
PPN1YDR452W SCC2Q04002 1493 aa0.87□□□□□ -2.27
PPN1YDR452W GDB1Q06625 1536 aa0.86□□□□□ -2.27
PPN1YDR452W YRF1-2P40105 1681 aa0.86□□□□□ -2.27
PPN1YDR452W DBF2P22204 572 aa0.86□□□□□ -2.27
PPN1YDR452W GVP36P40531 326 aaKnown RBP0.86□□□□□ -2.27
PPN1YDR452W NUP57P48837 541 aa0.86□□□□□ -2.27
PPN1YDR452W KNH1P50112 268 aa0.86□□□□□ -2.27
PPN1YDR452W FYV6P53913 173 aa0.86□□□□□ -2.27
PPN1YDR452W GPM2Q12008 311 aa0.86□□□□□ -2.27
PPN1YDR452W TUS1Q06412 1307 aa0.86□□□□□ -2.27
PPN1YDR452W PDR5P33302 1511 aaKnown RBP0.86□□□□□ -2.27
PPN1YDR452W TIM9O74700 87 aa0.86□□□□□ -2.27
PPN1YDR452W MSN4P33749 630 aa0.86□□□□□ -2.27
PPN1YDR452W SIP3P38717 1229 aa0.86□□□□□ -2.27
PPN1YDR452W FAR7P43592 221 aa0.86□□□□□ -2.27
PPN1YDR452W ERJ5P43613 295 aaPredicted RBP0.86□□□□□ -2.27
PPN1YDR452W BRR6P53062 197 aa0.86□□□□□ -2.27
PPN1YDR452W GAS3Q03655 524 aa0.86□□□□□ -2.27
PPN1YDR452W MSB2P32334 1306 aa0.85□□□□□ -2.27
PPN1YDR452W MDN1Q12019 4910 aaKnown RBP0.85□□□□□ -2.27
PPN1YDR452W RHO1P06780 209 aaKnown RBP0.85□□□□□ -2.27
PPN1YDR452W SSO1P32867 290 aa0.85□□□□□ -2.27
PPN1YDR452W APS1P35181 156 aa0.85□□□□□ -2.27
PPN1YDR452W SHE2P36068 246 aaKnown RBP RIP-Chip data0.85□□□□□ -2.27not detected
PPN1YDR452W UTP30P36144 274 aaKnown RBP0.85□□□□□ -2.27
PPN1YDR452W YBR209WP38311 105 aa0.85□□□□□ -2.27
PPN1YDR452W COX15P40086 486 aa0.85□□□□□ -2.27
PPN1YDR452W EAF6P47128 113 aa0.85□□□□□ -2.27
PPN1YDR452W ALG13P53178 202 aa0.85□□□□□ -2.27
PPN1YDR452W YDL180WQ12301 547 aa0.85□□□□□ -2.27
PPN1YDR452W YDR034W-BQ6Q5X2 51 aa0.85□□□□□ -2.27
PPN1YDR452W ATG40Q99325 256 aa0.85□□□□□ -2.27
PPN1YDR452W IML1P47170 1584 aa0.85□□□□□ -2.27
PPN1YDR452W TVP38P36164 337 aa0.84□□□□□ -2.27
PPN1YDR452W YER085CP40058 173 aa0.84□□□□□ -2.27
PPN1YDR452W BXI1P48558 297 aa0.84□□□□□ -2.27
PPN1YDR452W YNL146C-AQ3E7Z1 64 aa0.84□□□□□ -2.27
PPN1YDR452W AQY2P0CD90 149 aa0.84□□□□□ -2.28
PPN1YDR452W VMA6P32366 345 aaKnown RBP0.84□□□□□ -2.28
PPN1YDR452W RIO2P40160 425 aaKnown RBP0.84□□□□□ -2.28
PPN1YDR452W BUD3P25558 1636 aa0.83□□□□□ -2.28
PPN1YDR452W GSC2P40989 1895 aa0.83□□□□□ -2.28
PPN1YDR452W THP2O13539 261 aaKnown RBP0.83□□□□□ -2.28
PPN1YDR452W SEC4P07560 215 aaKnown RBP0.83□□□□□ -2.28
PPN1YDR452W YMR31P19955 123 aa0.83□□□□□ -2.28
PPN1YDR452W SKG1P36169 355 aa0.83□□□□□ -2.28
PPN1YDR452W YBR285WP38354 144 aa0.83□□□□□ -2.28
PPN1YDR452W YDR249CQ03787 373 aa0.83□□□□□ -2.28
PPN1YDR452W SPP41P38904 1435 aa0.83□□□□□ -2.28
PPN1YDR452W YLR236CA0A023PZG4 107 aa0.82□□□□□ -2.28
PPN1YDR452W IDH1P28834 360 aaKnown RBP RIP-Chip data0.82□□□□□ -2.28not detected
PPN1YDR452W RTC3P38804 111 aaPredicted RBP0.82□□□□□ -2.28
PPN1YDR452W RSF2P46974 1380 aa0.82□□□□□ -2.28
PPN1YDR452W NUP159P40477 1460 aa0.82□□□□□ -2.28
PPN1YDR452W SEC7P11075 2009 aaKnown RBP0.82□□□□□ -2.28
PPN1YDR452W SPO14P36126 1683 aa0.82□□□□□ -2.28
PPN1YDR452W MIC12P38341 106 aa0.82□□□□□ -2.28
PPN1YDR452W VMA22P38784 181 aa0.82□□□□□ -2.28
PPN1YDR452W YEL067CP39978 195 aa0.82□□□□□ -2.28
PPN1YDR452W YGR050CP53231 118 aa0.82□□□□□ -2.28
PPN1YDR452W TOP2P06786 1428 aaKnown RBP0.82□□□□□ -2.28
PPN1YDR452W TRM3Q07527 1436 aa0.82□□□□□ -2.28
PPN1YDR452W MYO4P32492 1471 aa0.82□□□□□ -2.28
PPN1YDR452W UFD4P33202 1483 aa0.82□□□□□ -2.28
PPN1YDR452W TY1B-NL2Q99337 1749 aaKnown RBP0.81□□□□□ -2.28
PPN1YDR452W SIR2P06700 562 aa0.81□□□□□ -2.28
PPN1YDR452W URA5P13298 226 aaKnown RBP0.81□□□□□ -2.28
PPN1YDR452W KSS1P14681 368 aa0.81□□□□□ -2.28
PPN1YDR452W YAE1P47118 141 aaPredicted RBP0.81□□□□□ -2.28
PPN1YDR452W SEY1Q99287 776 aa0.81□□□□□ -2.28
PPN1YDR452W ACC1Q00955 2233 aaKnown RBP0.81□□□□□ -2.28
PPN1YDR452W MEC1P38111 2368 aa0.81□□□□□ -2.28
PPN1YDR452W PDR11P40550 1411 aa0.81□□□□□ -2.28
PPN1YDR452W SNQ2P32568 1501 aaKnown RBP0.81□□□□□ -2.28
PPN1YDR452W SEC11P15367 167 aa0.81□□□□□ -2.28
PPN1YDR452W RPL24BP24000 155 aaKnown RBP0.81□□□□□ -2.28
PPN1YDR452W KDX1P36005 433 aa0.81□□□□□ -2.28
PPN1YDR452W OPY1P38271 328 aa0.81□□□□□ -2.28
PPN1YDR452W FLX1P40464 311 aa0.81□□□□□ -2.28
PPN1YDR452W YDR274CP87283 123 aa0.81□□□□□ -2.28
PPN1YDR452W YSP2Q06681 1438 aa0.81□□□□□ -2.28
PPN1YDR452W STU1P38198 1513 aa0.81□□□□□ -2.28
PPN1YDR452W RPO21P04050 1733 aaKnown RBP0.81□□□□□ -2.28
PPN1YDR452W CSF1Q12150 2958 aa0.8□□□□□ -2.28
PPN1YDR452W TY1B-BRQ12193 1756 aa0.8□□□□□ -2.28
PPN1YDR452W TY1B-GR3Q12316 1755 aa0.8□□□□□ -2.28
PPN1YDR452W TY1B-ORQ92393 1755 aa0.8□□□□□ -2.28
PPN1YDR452W YBR056W-AI2HB52 66 aa0.8□□□□□ -2.28
PPN1YDR452W RPB3P16370 318 aaKnown RBP0.8□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 42.1 ms