RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	EMC6	Q12431	108 aa		3.54	□□□□□ -1.84
RPN5	YDL147W	YIL177C	P40434	1758 aa		3.54	□□□□□ -1.84
RPN5	YDL147W	YJL225C	P40889	1758 aa		3.54	□□□□□ -1.84
RPN5	YDL147W	TIM9	O74700	87 aa		3.53	□□□□□ -1.84
RPN5	YDL147W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	3.53	□□□□□ -1.84	not detected
RPN5	YDL147W	CNB1	P25296	175 aa		3.53	□□□□□ -1.84
RPN5	YDL147W	AIM2	P39721	246 aa		3.53	□□□□□ -1.84
RPN5	YDL147W	PGD1	P40356	397 aa		3.53	□□□□□ -1.84
RPN5	YDL147W	YIP3	P53633	176 aa		3.53	□□□□□ -1.84
RPN5	YDL147W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	3.52	□□□□□ -1.85	not detected
RPN5	YDL147W	MRPL17	P36528	281 aa		3.52	□□□□□ -1.85
RPN5	YDL147W	HNT1	Q04344	158 aa	Known RBP	3.52	□□□□□ -1.85
RPN5	YDL147W	RPL35A	P0CX84	120 aa	Known RBP	3.51	□□□□□ -1.85
RPN5	YDL147W	RPL35B	P0CX85	120 aa	Known RBP	3.51	□□□□□ -1.85
RPN5	YDL147W	YHR180W	P38868	163 aa		3.51	□□□□□ -1.85
RPN5	YDL147W	GVP36	P40531	326 aa	Known RBP	3.51	□□□□□ -1.85
RPN5	YDL147W	PRM10	P42946	383 aa		3.51	□□□□□ -1.85
RPN5	YDL147W	YLR031W	Q07978	186 aa		3.51	□□□□□ -1.85
RPN5	YDL147W	QCR6	P00127	147 aa		3.5	□□□□□ -1.85
RPN5	YDL147W	UBC12	P52491	188 aa		3.5	□□□□□ -1.85
RPN5	YDL147W	YCR090C	P25654	182 aa	Known RBP	3.49	□□□□□ -1.85
RPN5	YDL147W	MGT1	P26188	188 aa		3.49	□□□□□ -1.85
RPN5	YDL147W	MEI4	P29467	408 aa		3.49	□□□□□ -1.85
RPN5	YDL147W	RME1	P32338	300 aa	Known RBP	3.49	□□□□□ -1.85
RPN5	YDL147W	SNC2	P33328	115 aa		3.49	□□□□□ -1.85
RPN5	YDL147W	YOR062C	P36025	268 aa		3.49	□□□□□ -1.85
RPN5	YDL147W	UMP1	P38293	148 aa		3.49	□□□□□ -1.85
RPN5	YDL147W	ERV15	P38312	142 aa		3.49	□□□□□ -1.85
RPN5	YDL147W	MRPS8	Q03799	155 aa		3.49	□□□□□ -1.85
RPN5	YDL147W	SPG3	Q04398	127 aa	Predicted RBP	3.49	□□□□□ -1.85
RPN5	YDL147W	RPS24A	P0CX31	135 aa	Known RBP	3.48	□□□□□ -1.85
RPN5	YDL147W	RPS24B	P0CX32	135 aa	Known RBP	3.48	□□□□□ -1.85
RPN5	YDL147W	PET9	P18239	318 aa	Known RBP	3.48	□□□□□ -1.85
RPN5	YDL147W	RPL33B	P41056	107 aa	Known RBP	3.48	□□□□□ -1.85
RPN5	YDL147W	FMP32	P43557	207 aa		3.48	□□□□□ -1.85
RPN5	YDL147W	ARP3	P47117	449 aa	Known RBP	3.48	□□□□□ -1.85
RPN5	YDL147W	ARO8	P53090	500 aa	Known RBP	3.48	□□□□□ -1.85
RPN5	YDL147W	DGA1	Q08650	418 aa		3.48	□□□□□ -1.85
RPN5	YDL147W	PEX4	P29340	183 aa		3.47	□□□□□ -1.85
RPN5	YDL147W	ARC19	P33204	171 aa	Known RBP	3.47	□□□□□ -1.85
RPN5	YDL147W	ICE2	P40499	491 aa		3.47	□□□□□ -1.85
RPN5	YDL147W	YKE4	P40544	346 aa		3.47	□□□□□ -1.85
RPN5	YDL147W	YLR460C	P54007	376 aa		3.47	□□□□□ -1.85
RPN5	YDL147W	YDR274C	P87283	123 aa		3.47	□□□□□ -1.85
RPN5	YDL147W	AIM34	Q03673	198 aa		3.47	□□□□□ -1.85
RPN5	YDL147W	ATP15	P21306	62 aa		3.46	□□□□□ -1.85
RPN5	YDL147W	YET1	P35723	206 aa		3.46	□□□□□ -1.85
RPN5	YDL147W	YNR062C	P53748	327 aa		3.46	□□□□□ -1.85
RPN5	YDL147W	DAD3	P69850	94 aa		3.46	□□□□□ -1.85
RPN5	YDL147W	PHO88	P38264	188 aa	Predicted RBP	3.45	□□□□□ -1.86
RPN5	YDL147W	EAF6	P47128	113 aa		3.45	□□□□□ -1.86
RPN5	YDL147W	ERG25	P53045	309 aa		3.45	□□□□□ -1.86
RPN5	YDL147W	RGM1	Q00453	211 aa		3.45	□□□□□ -1.86
RPN5	YDL147W	BRX1	Q08235	291 aa	Known RBP	3.45	□□□□□ -1.86
RPN5	YDL147W	YPR014C	Q6B0W2	109 aa		3.45	□□□□□ -1.86
RPN5	YDL147W	SEC14	P24280	304 aa	Known RBP	3.44	□□□□□ -1.86
RPN5	YDL147W	AHC2	P25649	128 aa		3.44	□□□□□ -1.86
RPN5	YDL147W	LSM4	P40070	187 aa	Known RBP	3.44	□□□□□ -1.86
RPN5	YDL147W	TIR3	P40552	269 aa		3.44	□□□□□ -1.86
RPN5	YDL147W	TMA22	P47089	198 aa	Predicted RBP	3.44	□□□□□ -1.86
RPN5	YDL147W	YNL140C	P53910	189 aa		3.44	□□□□□ -1.86
RPN5	YDL147W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	3.44	□□□□□ -1.86	not detected
RPN5	YDL147W	YKR041W	P36134	250 aa		3.44	□□□□□ -1.86
RPN5	YDL147W	YBR285W	P38354	144 aa		3.44	□□□□□ -1.86
RPN5	YDL147W	SKI6	P46948	246 aa	Predicted RBP	3.44	□□□□□ -1.86
RPN5	YDL147W	YJR111C	P47148	283 aa	Known RBP	3.44	□□□□□ -1.86
RPN5	YDL147W	YNL247W	P53852	767 aa	Known RBP	3.44	□□□□□ -1.86
RPN5	YDL147W	YMR315W	Q04869	349 aa	Known RBP	3.44	□□□□□ -1.86
RPN5	YDL147W	YOR283W	Q12040	230 aa	Known RBP	3.44	□□□□□ -1.86
RPN5	YDL147W	SCL1	P21243	252 aa	Known RBP	3.43	□□□□□ -1.86
RPN5	YDL147W	OCH1	P31755	480 aa		3.43	□□□□□ -1.86
RPN5	YDL147W	AVT2	P39981	480 aa		3.43	□□□□□ -1.86
RPN5	YDL147W	YER076C	P40049	302 aa		3.43	□□□□□ -1.86
RPN5	YDL147W	SER2	P42941	309 aa		3.43	□□□□□ -1.86
RPN5	YDL147W	DOC1	P53068	250 aa		3.43	□□□□□ -1.86
RPN5	YDL147W	JAC1	P53193	184 aa		3.43	□□□□□ -1.86
RPN5	YDL147W	CGI121	Q03705	181 aa	Known RBP	3.43	□□□□□ -1.86
RPN5	YDL147W	PLP1	Q04004	230 aa		3.43	□□□□□ -1.86
RPN5	YDL147W	SHH4	Q06236	168 aa		3.43	□□□□□ -1.86
RPN5	YDL147W	PEX11	Q12462	236 aa		3.43	□□□□□ -1.86
RPN5	YDL147W	NVJ1	P38881	321 aa		3.42	□□□□□ -1.86
RPN5	YDL147W	YEA4	P40004	342 aa		3.42	□□□□□ -1.86
RPN5	YDL147W	SMD2	Q06217	110 aa	Known RBP	3.42	□□□□□ -1.86
RPN5	YDL147W	YLR050C	Q12155	161 aa	Known RBP	3.42	□□□□□ -1.86
RPN5	YDL147W	MPD1	Q12404	318 aa	Known RBP	3.42	□□□□□ -1.86
RPN5	YDL147W	ODC2	Q99297	307 aa		3.42	□□□□□ -1.86
RPN5	YDL147W	QCR2	P07257	368 aa		3.41	□□□□□ -1.86
RPN5	YDL147W	CLG1	P35190	452 aa		3.41	□□□□□ -1.86
RPN5	YDL147W	MAK5	P38112	773 aa	Predicted RBP	3.41	□□□□□ -1.86
RPN5	YDL147W	YNL217W	P40152	326 aa		3.41	□□□□□ -1.86
RPN5	YDL147W	TDA4	P47153	279 aa		3.41	□□□□□ -1.86
RPN5	YDL147W	PGA1	P53896	198 aa		3.41	□□□□□ -1.86
RPN5	YDL147W	DYN3	Q04949	312 aa		3.41	□□□□□ -1.86
RPN5	YDL147W	FSF1	Q12029	327 aa	Known RBP	3.41	□□□□□ -1.86
RPN5	YDL147W	CPA1	P07258	411 aa	Known RBP	3.4	□□□□□ -1.87
RPN5	YDL147W	PAN3	P36102	679 aa	Predicted RBP	3.4	□□□□□ -1.87
RPN5	YDL147W	FES1	P38260	290 aa		3.4	□□□□□ -1.87
RPN5	YDL147W	OPY1	P38271	328 aa		3.4	□□□□□ -1.87
RPN5	YDL147W	YHR022C	P38763	256 aa		3.4	□□□□□ -1.87
RPN5	YDL147W	YER134C	P40081	178 aa		3.4	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms